RNA–Protein interactions for RNA: ENST00000532678.1

PUM1-223, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-223	ENST00000532678	TSSK6	Q9BXA6	273 aa		6.99	□□□□□ -1.29
PUM1-223	ENST00000532678	C1QTNF6	Q9BXI9	259 aa		6.99	□□□□□ -1.29
PUM1-223	ENST00000532678	GABARAPL1	Q9H0R8	117 aa		6.99	□□□□□ -1.29
PUM1-223	ENST00000532678	SYT4	Q9H2B2	425 aa		6.99	□□□□□ -1.29
PUM1-223	ENST00000532678	FN3K	Q9H479	309 aa		6.99	□□□□□ -1.29
PUM1-223	ENST00000532678	CXorf56	Q9H5V9	222 aa		6.99	□□□□□ -1.29
PUM1-223	ENST00000532678	S100A14	Q9HCY8	104 aa		6.99	□□□□□ -1.29
PUM1-223	ENST00000532678	OBP2B	Q9NPH6	170 aa		6.99	□□□□□ -1.29
PUM1-223	ENST00000532678	PAPOLB	Q9NRJ5	636 aa	Known RBP	6.99	□□□□□ -1.29
PUM1-223	ENST00000532678	ZNF701	Q9NV72	531 aa	Predicted RBP	6.99	□□□□□ -1.29
PUM1-223	ENST00000532678	IL20	Q9NYY1	176 aa		6.99	□□□□□ -1.29
PUM1-223	ENST00000532678	VSX1	Q9NZR4	365 aa	Predicted RBP	6.99	□□□□□ -1.29
PUM1-223	ENST00000532678	OAZ3	Q9UMX2	235 aa		6.99	□□□□□ -1.29
PUM1-223	ENST00000532678	SF3B6	Q9Y3B4	125 aa	Known RBP	6.99	□□□□□ -1.29
PUM1-223	ENST00000532678	UGT2A1	Q9Y4X1	527 aa		6.99	□□□□□ -1.29
PUM1-223	ENST00000532678	ANKRD34B	A5PLL1	514 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	DPRX	A6NFQ7	191 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	MITF	O75030	526 aa	Predicted RBP	6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	FARS2	O95363	451 aa	Known RBP	6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	REN	P00797	406 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	IGHV4-39	P01824	125 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	HLA-H	P01893	362 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	CD3E	P07766	207 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	CD79A	P11912	226 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	OSM	P13725	252 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	CTLA4	P16410	223 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	POU1F1	P28069	291 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	CDKN2A	P42771	156 aa	Known RBP	6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	DAP	P51397	102 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	SPOCK1	Q08629	439 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	COX10	Q12887	443 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	NPRL3	Q12980	569 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	PGGHG	Q32M88	737 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	ZNF672	Q499Z4	452 aa	Predicted RBP	6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	THEM4	Q5T1C6	240 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	FAHD1	Q6P587	224 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	ZNF627	Q7L945	461 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	C10orf67	Q8IYJ2	551 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	LNX2	Q8N448	690 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	SLC22A24	Q8N4F4	322 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	OR52E2	Q8NGJ4	325 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	DNAJC9	Q8WXX5	260 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	FAM168A	Q92567	244 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	FBXW5	Q969U6	566 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	NABP1	Q96AH0	204 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	KIRREL1	Q96J84	757 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	MAP6	Q96JE9	813 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	FOXN4	Q96NZ1	517 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	RBP7	Q96R05	134 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	NMNAT3	Q96T66	252 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	SH3GL3	Q99963	347 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	RERGL	Q9H628	205 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	ESRP2	Q9H6T0	727 aa	Known RBP	6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	NOX3	Q9HBY0	568 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	NGB	Q9NPG2	151 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	RPRD1B	Q9NQG5	326 aa	Known RBP	6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	KRT84	Q9NSB2	600 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	ZNF224	Q9NZL3	707 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	BAIAP2	Q9UQB8	552 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	ABCA1	O95477	2261 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	ALPK2	Q86TB3	2170 aa		6.98	□□□□□ -1.29
PUM1-223	ENST00000532678	FBN3	Q75N90	2809 aa		6.97	□□□□□ -1.29
PUM1-223	ENST00000532678	IGHV1-18	A0A0C4DH31	117 aa		6.97	□□□□□ -1.29
PUM1-223	ENST00000532678	ABCD4	O14678	606 aa		6.97	□□□□□ -1.29
PUM1-223	ENST00000532678	IDH3B	O43837	385 aa		6.97	□□□□□ -1.29
PUM1-223	ENST00000532678	AHCYL1	O43865	530 aa		6.97	□□□□□ -1.29
PUM1-223	ENST00000532678	SLC16A7	O60669	478 aa		6.97	□□□□□ -1.29
PUM1-223	ENST00000532678	KHDRBS3	O75525	346 aa	Known RBP	6.97	□□□□□ -1.29
PUM1-223	ENST00000532678	UBL3	O95164	117 aa		6.97	□□□□□ -1.29
PUM1-223	ENST00000532678	CELA3B	P08861	270 aa		6.97	□□□□□ -1.29
PUM1-223	ENST00000532678	DANCR	P0C864	163 aa		6.97	□□□□□ -1.29
PUM1-223	ENST00000532678	OR8G3P	P0DMU2	310 aa		6.97	□□□□□ -1.29
PUM1-223	ENST00000532678	PAX1	P15863	534 aa		6.97	□□□□□ -1.29
PUM1-223	ENST00000532678	NPR2	P20594	1047 aa		6.97	□□□□□ -1.29
PUM1-223	ENST00000532678	MSR1	P21757	451 aa		6.97	□□□□□ -1.29
PUM1-223	ENST00000532678	IGFBP5	P24593	272 aa		6.97	□□□□□ -1.29
PUM1-223	ENST00000532678	CD40	P25942	277 aa		6.97	□□□□□ -1.29
PUM1-223	ENST00000532678	GRK5	P34947	590 aa		6.97	□□□□□ -1.29
PUM1-223	ENST00000532678	PTDSS1	P48651	473 aa	Known RBP	6.97	□□□□□ -1.29
PUM1-223	ENST00000532678	IDH3G	P51553	393 aa	Predicted RBP	6.97	□□□□□ -1.29
PUM1-223	ENST00000532678	CDH11	P55287	796 aa		6.97	□□□□□ -1.29
PUM1-223	ENST00000532678	MRPS34	P82930	218 aa	Known RBP	6.97	□□□□□ -1.29
PUM1-223	ENST00000532678	PIGF	Q07326	219 aa		6.97	□□□□□ -1.29
PUM1-223	ENST00000532678	DBP	Q10586	325 aa	Predicted RBP	6.97	□□□□□ -1.29
PUM1-223	ENST00000532678	ETFDH	Q16134	617 aa		6.97	□□□□□ -1.29
PUM1-223	ENST00000532678	GSG1	Q2KHT4	349 aa		6.97	□□□□□ -1.29
PUM1-223	ENST00000532678	NRN1L	Q496H8	165 aa		6.97	□□□□□ -1.29
PUM1-223	ENST00000532678	C1QTNF12	Q5T7M4	302 aa		6.97	□□□□□ -1.29
PUM1-223	ENST00000532678	KDM4D	Q6B0I6	523 aa		6.97	□□□□□ -1.29
PUM1-223	ENST00000532678	SLC27A4	Q6P1M0	643 aa		6.97	□□□□□ -1.29
PUM1-223	ENST00000532678	DNM1P34	Q6PK57	102 aa		6.97	□□□□□ -1.29
PUM1-223	ENST00000532678	TMEM108	Q6UXF1	575 aa		6.97	□□□□□ -1.29
PUM1-223	ENST00000532678	FOXL2NB	Q6ZUU3	175 aa		6.97	□□□□□ -1.29
PUM1-223	ENST00000532678	CXXC5	Q7LFL8	322 aa	Known RBP	6.97	□□□□□ -1.29
PUM1-223	ENST00000532678	SLC16A14	Q7RTX9	510 aa		6.97	□□□□□ -1.29
PUM1-223	ENST00000532678	MDP1	Q86V88	176 aa		6.97	□□□□□ -1.29
PUM1-223	ENST00000532678	MYPOP	Q86VE0	399 aa	Predicted RBP	6.97	□□□□□ -1.29
PUM1-223	ENST00000532678	SKA3	Q8IX90	412 aa		6.97	□□□□□ -1.29
PUM1-223	ENST00000532678	PQLC1	Q8N2U9	271 aa		6.97	□□□□□ -1.29

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms