RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 ENTPD1P49961 510 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 LSM6P62312 80 aaKnown RBP10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 TUBA1BP68363 451 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 TFF3Q07654 80 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 PCK2Q16822 640 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 OR7E24Q6IFN5 339 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 CORO6Q6QEF8 472 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 TUBA1AQ71U36 451 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 SLC16A9Q7RTY1 509 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 DPY19L4Q7Z388 723 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 LINC00346Q8IVM7 164 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 WDR31Q8NA23 367 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 OR10H5Q8NGA6 315 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 OR6N2Q8NGY6 317 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 SGCDQ92629 289 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 GGHQ92820 318 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 RNASE6Q93091 150 aaKnown RBP10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 S100PBPQ96BU1 408 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 CNN2Q99439 309 aaKnown RBP10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 HDHD5Q9BXW7 423 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 CYB5R1Q9UHQ9 305 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 PSORS1C1Q9UIG5 152 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 EXOGQ9Y2C4 368 aaKnown RBP10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 SNX5Q9Y5X3 404 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 CSMD1Q96PZ7 3565 aa10.63□□□□□ -0.71
TRAF3IP2-211ENST00000528599 A0A1W2PR80 420 aa10.62□□□□□ -0.71
TRAF3IP2-211ENST00000528599 A1L4Q6 167 aa10.62□□□□□ -0.71
TRAF3IP2-211ENST00000528599 C16orf97H3BN30 126 aa10.62□□□□□ -0.71
TRAF3IP2-211ENST00000528599 J3QRE1 110 aa10.62□□□□□ -0.71
TRAF3IP2-211ENST00000528599 FARS2O95363 451 aaKnown RBP10.62□□□□□ -0.71
TRAF3IP2-211ENST00000528599 HLA-HP01893 362 aa10.62□□□□□ -0.71
TRAF3IP2-211ENST00000528599 ADRA2AP08913 450 aa10.62□□□□□ -0.71
TRAF3IP2-211ENST00000528599 SPARCP09486 303 aa10.62□□□□□ -0.71
TRAF3IP2-211ENST00000528599 PCMT1P22061 227 aa10.62□□□□□ -0.71
TRAF3IP2-211ENST00000528599 ATP6V1E1P36543 226 aa10.62□□□□□ -0.71
TRAF3IP2-211ENST00000528599 TMBIM6P55061 237 aa10.62□□□□□ -0.71
TRAF3IP2-211ENST00000528599 TEX30Q5JUR7 227 aa10.62□□□□□ -0.71
TRAF3IP2-211ENST00000528599 C22orf34Q6ZV56 151 aa10.62□□□□□ -0.71
TRAF3IP2-211ENST00000528599 SLC16A14Q7RTX9 510 aa10.62□□□□□ -0.71
TRAF3IP2-211ENST00000528599 OR52I1Q8NGK6 324 aa10.62□□□□□ -0.71
TRAF3IP2-211ENST00000528599 SIGLEC11Q96RL6 698 aa10.62□□□□□ -0.71
TRAF3IP2-211ENST00000528599 ACTR6Q9GZN1 396 aa10.62□□□□□ -0.71
TRAF3IP2-211ENST00000528599 NOX3Q9HBY0 568 aa10.62□□□□□ -0.71
TRAF3IP2-211ENST00000528599 SLC17A5Q9NRA2 495 aa10.62□□□□□ -0.71
TRAF3IP2-211ENST00000528599 FKBP14Q9NWM8 211 aa10.62□□□□□ -0.71
TRAF3IP2-211ENST00000528599 PAK1IP1Q9NWT1 392 aaPredicted RBP10.62□□□□□ -0.71
TRAF3IP2-211ENST00000528599 ASH2LQ9UBL3 628 aa10.62□□□□□ -0.71
TRAF3IP2-211ENST00000528599 KCNG2Q9UJ96 466 aa10.62□□□□□ -0.71
TRAF3IP2-211ENST00000528599 KLHDC2Q9Y2U9 406 aa10.62□□□□□ -0.71
TRAF3IP2-211ENST00000528599 CACNA1CQ13936 2221 aa10.61□□□□□ -0.71
TRAF3IP2-211ENST00000528599 OR5H1A6NKK0 313 aa10.61□□□□□ -0.71
TRAF3IP2-211ENST00000528599 C12orf71A8MTZ7 269 aa10.61□□□□□ -0.71
TRAF3IP2-211ENST00000528599 PTGES3LE9PB15 166 aa10.61□□□□□ -0.71
TRAF3IP2-211ENST00000528599 MMP7P09237 267 aaPredicted RBP10.61□□□□□ -0.71
TRAF3IP2-211ENST00000528599 ZNF32P17041 273 aa10.61□□□□□ -0.71
TRAF3IP2-211ENST00000528599 MVKQ03426 396 aa10.61□□□□□ -0.71
TRAF3IP2-211ENST00000528599 PIGFQ07326 219 aa10.61□□□□□ -0.71
TRAF3IP2-211ENST00000528599 RAB40BQ12829 278 aa10.61□□□□□ -0.71
TRAF3IP2-211ENST00000528599 POU4F2Q12837 409 aa10.61□□□□□ -0.71
TRAF3IP2-211ENST00000528599 SLC18B1Q6NT16 456 aa10.61□□□□□ -0.71
TRAF3IP2-211ENST00000528599 AHSA2Q719I0 299 aa10.61□□□□□ -0.71
TRAF3IP2-211ENST00000528599 PRSS48Q7RTY5 328 aa10.61□□□□□ -0.71
TRAF3IP2-211ENST00000528599 CDC20BQ86Y33 519 aa10.61□□□□□ -0.71
TRAF3IP2-211ENST00000528599 SLC35F2Q8IXU6 374 aa10.61□□□□□ -0.71
TRAF3IP2-211ENST00000528599 C17orf78Q8N4C9 275 aa10.61□□□□□ -0.71
TRAF3IP2-211ENST00000528599 RFLNBQ8N5W9 214 aa10.61□□□□□ -0.71
TRAF3IP2-211ENST00000528599 ZNF540Q8NDQ6 660 aa10.61□□□□□ -0.71
TRAF3IP2-211ENST00000528599 STEAP2Q8NFT2 490 aa10.61□□□□□ -0.71
TRAF3IP2-211ENST00000528599 OR52N5Q8NH56 324 aa10.61□□□□□ -0.71
TRAF3IP2-211ENST00000528599 OTOSQ8NHW6 89 aa10.61□□□□□ -0.71
TRAF3IP2-211ENST00000528599 MUL1Q969V5 352 aa10.61□□□□□ -0.71
TRAF3IP2-211ENST00000528599 ISOC1Q96CN7 298 aa10.61□□□□□ -0.71
TRAF3IP2-211ENST00000528599 AMELYQ99218 206 aa10.61□□□□□ -0.71
TRAF3IP2-211ENST00000528599 CDADC1Q9BWV3 514 aa10.61□□□□□ -0.71
TRAF3IP2-211ENST00000528599 FGF20Q9NP95 211 aaPredicted RBP10.61□□□□□ -0.71
TRAF3IP2-211ENST00000528599 B3GNT2Q9NY97 397 aa10.61□□□□□ -0.71
TRAF3IP2-211ENST00000528599 COPS3Q9UNS2 423 aa10.61□□□□□ -0.71
TRAF3IP2-211ENST00000528599 POLR1DQ9Y2S0 133 aa10.61□□□□□ -0.71
TRAF3IP2-211ENST00000528599 ARPC4-TTLL3A0A0A6YYG9 625 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 EFCAB10A6NFE3 127 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 WNT11O96014 354 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 CD79AP11912 226 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 PIPP12273 146 aaPredicted RBP10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 HOXB1P14653 301 aaPredicted RBP10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 ALOX5APP20292 161 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 CAPZA2P47755 286 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 HIST1H3AP68431 136 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 ST3GAL4Q11206 333 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 AQP6Q13520 282 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 KLHL22Q53GT1 634 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 TIMM23BQ5SRD1 257 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 HIST2H3PS2Q5TEC6 136 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 HIST2H2BCQ6DN03 193 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 CFAP77Q6ZQR2 320 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 HIST2H3AQ71DI3 136 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 DCXRQ7Z4W1 244 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 CLVS1Q8IUQ0 354 aaPredicted RBP10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 ST7LQ8TDW4 575 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 MAP6Q96JE9 813 aa10.6□□□□□ -0.71
TRAF3IP2-211ENST00000528599 TBX5Q99593 518 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms