RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 REEP1Q9H902 201 aa7.8□□□□□ -1.16
CMTM1-210ENST00000528441 SAP30LQ9HAJ7 183 aa7.8□□□□□ -1.16
CMTM1-210ENST00000528441 SRA1Q9HD15 236 aaKnown RBP7.8□□□□□ -1.16
CMTM1-210ENST00000528441 SIGLEC7Q9Y286 467 aa7.8□□□□□ -1.16
CMTM1-210ENST00000528441 COA3Q9Y2R0 106 aaPredicted RBP7.8□□□□□ -1.16
CMTM1-210ENST00000528441 CHD3Q12873 2000 aaKnown RBP7.79□□□□□ -1.16
CMTM1-210ENST00000528441 IGHV4-61A0A0C4DH41 118 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 TMEM129A0AVI4 362 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 C17orf100A8MU93 164 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 E2F6O75461 281 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 CRLF1O75462 422 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 ATP5HO75947 161 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 SNAP29O95721 258 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 HPXP02790 462 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 MMP7P09237 267 aaPredicted RBP7.79□□□□□ -1.16
CMTM1-210ENST00000528441 IGHV4-31P0DP07 118 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 CTLA4P16410 223 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 ZNF823P16415 610 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 ATP6V1B2P21281 511 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 TNFSF4P23510 183 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 SRP14P37108 136 aaKnown RBP7.79□□□□□ -1.16
CMTM1-210ENST00000528441 MAGEB1P43366 347 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 CCL8P80075 99 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 PPP1R8Q12972 351 aaKnown RBP7.79□□□□□ -1.16
CMTM1-210ENST00000528441 AQP6Q13520 282 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 FXNQ16595 210 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 PCGF3Q3KNV8 242 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 SPATS1Q496A3 300 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 ZMAT1Q5H9K5 638 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 SLC35F1Q5T1Q4 408 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 LCE2AQ5TA79 106 aaPredicted RBP7.79□□□□□ -1.16
CMTM1-210ENST00000528441 PGM2L1Q6PCE3 622 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 UGT2A3Q6UWM9 527 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 DNM1P46Q6ZS02 220 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 RINLQ6ZS11 566 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 IL17RELQ6ZVW7 336 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 SPATA24Q86W54 205 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 GLB1L2Q8IW92 636 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 ARHGAP24Q8N264 748 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 ZNF786Q8N393 782 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 CPEB3Q8NE35 698 aaKnown RBP7.79□□□□□ -1.16
CMTM1-210ENST00000528441 PROKR2Q8NFJ6 384 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 OR9Q2Q8NGE9 314 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 IPCEF1Q8WWN9 437 aaPredicted RBP7.79□□□□□ -1.16
CMTM1-210ENST00000528441 TIMD4Q96H15 378 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 C7orf34Q96L11 122 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 C4orf45Q96LM5 186 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 ZNF75AQ96N20 296 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 OR2J1Q9GZK6 312 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 EGLN1Q9GZT9 426 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 NUAK2Q9H093 628 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 WNT5BQ9H1J7 359 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 FN3KQ9H479 309 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 LPAR2Q9HBW0 351 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 RPRD1BQ9NQG5 326 aaKnown RBP7.79□□□□□ -1.16
CMTM1-210ENST00000528441 ACTR3BQ9P1U1 418 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 ASH2LQ9UBL3 628 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 LPAR3Q9UBY5 353 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 CDC42EP3Q9UKI2 254 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 SAMHD1Q9Y3Z3 626 aaKnown RBP7.79□□□□□ -1.16
CMTM1-210ENST00000528441 UGT2A1Q9Y4X1 527 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 U3KQV3 271 aa7.79□□□□□ -1.16
CMTM1-210ENST00000528441 MAP1AP78559 2803 aaPredicted RBP7.79□□□□□ -1.16
CMTM1-210ENST00000528441 MTORP42345 2549 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 CLDN25C9JDP6 229 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 H3BN98 237 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 GYG2O15488 501 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 AHCYL1O43865 530 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 KRT36O76013 467 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 TSPAN19P0C672 248 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 ZNF23P17027 643 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 ACHEP22303 614 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 FPR3P25089 353 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 LIMS1P48059 325 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 ZNF133P52736 654 aaPredicted RBP7.78□□□□□ -1.16
CMTM1-210ENST00000528441 MVKQ03426 396 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.78□□□□□ -1.16
CMTM1-210ENST00000528441 ENDOGQ14249 297 aaKnown RBP7.78□□□□□ -1.16
CMTM1-210ENST00000528441 TAF13Q15543 124 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 TRIP10Q15642 601 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 MSMPQ1L6U9 139 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 HFEQ30201 348 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 RFX4Q33E94 735 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 SLC36A3Q495N2 470 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 AVPI1Q5T686 147 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 RPL13AP3Q6NVV1 102 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 SHQ1Q6PI26 577 aaKnown RBP7.78□□□□□ -1.16
CMTM1-210ENST00000528441 RFPL4BQ6ZWI9 263 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 USP51Q70EK9 711 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 TRPM8Q7Z2W7 1104 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 ZER1Q7Z7L7 766 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 SYT9Q86SS6 491 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 PEG10Q86TG7 708 aaKnown RBP7.78□□□□□ -1.16
CMTM1-210ENST00000528441 LINC00471Q8N535 108 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 AQP11Q8NBQ7 271 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 NPEPL1Q8NDH3 523 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 OR52E2Q8NGJ4 325 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 ELMOD3Q96FG2 381 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 POM121L2Q96KW2 1035 aa7.78□□□□□ -1.16
CMTM1-210ENST00000528441 TSSK2Q96PF2 358 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms