RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 PPIAL4CA0A0B4J2A2 164 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 A0A1W2PPL8 197 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 CDHR4A6H8M9 788 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 EVPLLA8MZ36 301 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 FAM220BPB1ANY3 271 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 PPIAL4DF5H284 164 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 H0YL77 283 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 GTPBP1O00178 669 aaKnown RBP5.56□□□□□ -1.52
SDCBP-210ENST00000522843 ZNF264O43296 627 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 DNPH1O43598 174 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 EIF4E2O60573 245 aaKnown RBP5.56□□□□□ -1.52
SDCBP-210ENST00000522843 UPK3AO75631 287 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 CLPXO76031 633 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 SEC14L2O76054 403 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 KRT75O95678 551 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 ALOX5P09917 674 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 PPIAL4FP0DN26 164 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 TFPIP10646 304 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 NTSP30990 170 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 CCR4P51679 360 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 ATP12AP54707 1039 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 OR2B6P58173 313 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 UBE2NP61088 152 aaKnown RBP5.56□□□□□ -1.52
SDCBP-210ENST00000522843 HBA1P69905 142 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 POU6F2P78424 691 aaPredicted RBP5.56□□□□□ -1.52
SDCBP-210ENST00000522843 SLC34A1Q06495 639 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 RBBP4Q09028 425 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 CBFBQ13951 182 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 FLOT2Q14254 428 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 HLXQ14774 488 aaPredicted RBP5.56□□□□□ -1.52
SDCBP-210ENST00000522843 ARMCX4Q5H9R4 360 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 ERICH5Q6P6B1 374 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 Q6ZNX1 250 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 C9orf139Q6ZV77 190 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 CCDC80Q76M96 950 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 OLIG3Q7RTU3 272 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 AAED1Q7RTV5 226 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 DHFR2Q86XF0 187 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 TMCO5AQ8N6Q1 288 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 TRIML2Q8N7C3 387 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 OR4F5Q8NH21 305 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 CDC26Q8NHZ8 85 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 LINC01006Q8NI28 216 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 PPP1R35Q8TAP8 253 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 MIPOL1Q8TD10 442 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 ST8SIA1Q92185 356 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 MOAP1Q96BY2 351 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 RAB39BQ96DA2 213 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 ZNF75AQ96N20 296 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 MS4A4EQ96PG1 132 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 ALKBH3Q96Q83 286 aaPredicted RBP5.56□□□□□ -1.52
SDCBP-210ENST00000522843 PANX1Q96RD7 426 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 ECSITQ9BQ95 431 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 LAT2Q9GZY6 243 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 RAD21L1Q9H4I0 556 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 IKZF5Q9H5V7 419 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 TMEM38AQ9H6F2 299 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 THUMPD1Q9NXG2 353 aaKnown RBP5.56□□□□□ -1.52
SDCBP-210ENST00000522843 CHRNA9Q9UGM1 479 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 PURGQ9UJV8 347 aaKnown RBP5.56□□□□□ -1.52
SDCBP-210ENST00000522843 FZR1Q9UM11 496 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 PCDHGB4Q9UN71 923 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 DTNAQ9Y4J8 743 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 SNX13Q9Y5W8 968 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 STARD9Q9P2P6 4700 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 ELOVL7A1L3X0 281 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 H3BNX3 289 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 MGST3O14880 152 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 CASQ2O14958 399 aaPredicted RBP5.55□□□□□ -1.52
SDCBP-210ENST00000522843 HMGN2P05204 90 aaKnown RBP5.55□□□□□ -1.52
SDCBP-210ENST00000522843 GPIP06744 558 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 GUSBP08236 651 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 UBL4AP11441 157 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 ZNF35P13682 527 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 ZNF12P17014 697 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 EFNA1P20827 205 aaPredicted RBP5.55□□□□□ -1.52
SDCBP-210ENST00000522843 CDKN2CP42773 168 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 CRYBB2P43320 205 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 P2RY4P51582 365 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 NPRL3Q12980 569 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 ZNF154Q13106 437 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 SELPLGQ14242 412 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 LASP1Q14847 261 aaKnown RBP5.55□□□□□ -1.52
SDCBP-210ENST00000522843 RGNQ15493 299 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 SNCBQ16143 134 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 ALKBH6Q3KRA9 238 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 DCST2Q5T1A1 773 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 OTUD3Q5T2D3 398 aaPredicted RBP5.55□□□□□ -1.52
SDCBP-210ENST00000522843 PDZK1Q5T2W1 519 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 RUSC1-AS1Q66K80 236 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 GLYATQ6IB77 296 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 ZCCHC12Q6PEW1 402 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 FIP1L1Q6UN15 594 aaKnown RBP5.55□□□□□ -1.52
SDCBP-210ENST00000522843 ZNF621Q6ZSS3 439 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 MDP1Q86V88 176 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 SLC30A8Q8IWU4 369 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 MICU2Q8IYU8 434 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 CLECL1Q8IZS7 167 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 TMEM99Q8N816 258 aa5.55□□□□□ -1.52
SDCBP-210ENST00000522843 ZNF614Q8N883 585 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms