RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 ACSM4P0C7M7 580 aa3.02□□□□□ -1.93
HMGB1P1-201ENST00000522557 RALBP11234 206 aa3.02□□□□□ -1.93
HMGB1P1-201ENST00000522557 HPGDP15428 266 aa3.02□□□□□ -1.93
HMGB1P1-201ENST00000522557 TRAM2Q15035 370 aa3.02□□□□□ -1.93
HMGB1P1-201ENST00000522557 SF3A2Q15428 464 aaKnown RBP3.02□□□□□ -1.93
HMGB1P1-201ENST00000522557 RFX4Q33E94 735 aa3.02□□□□□ -1.93
HMGB1P1-201ENST00000522557 UBE2UQ5VVX9 321 aa3.02□□□□□ -1.93
HMGB1P1-201ENST00000522557 SPESP1Q6UW49 350 aa3.02□□□□□ -1.93
HMGB1P1-201ENST00000522557 MBOAT1Q6ZNC8 495 aa3.02□□□□□ -1.93
HMGB1P1-201ENST00000522557 TMEM179Q6ZVK1 233 aa3.02□□□□□ -1.93
HMGB1P1-201ENST00000522557 ZNF433Q8N7K0 673 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P1-201ENST00000522557 OR4S2Q8NH73 311 aa3.02□□□□□ -1.93
HMGB1P1-201ENST00000522557 GIMAP1Q8WWP7 306 aa3.02□□□□□ -1.93
HMGB1P1-201ENST00000522557 TOP1MTQ969P6 601 aa3.02□□□□□ -1.93
HMGB1P1-201ENST00000522557 CYYR1Q96J86 154 aa3.02□□□□□ -1.93
HMGB1P1-201ENST00000522557 FAM210BQ96KR6 192 aa3.02□□□□□ -1.93
HMGB1P1-201ENST00000522557 KRTAP4-3Q9BYR4 195 aa3.02□□□□□ -1.93
HMGB1P1-201ENST00000522557 LINC00597Q9H2U6 94 aa3.02□□□□□ -1.93
HMGB1P1-201ENST00000522557 RPRD1BQ9NQG5 326 aaKnown RBP3.02□□□□□ -1.93
HMGB1P1-201ENST00000522557 RBAKQ9NYW8 714 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P1-201ENST00000522557 NYAP2Q9P242 653 aa3.02□□□□□ -1.93
HMGB1P1-201ENST00000522557 GOLT1BQ9Y3E0 138 aa3.02□□□□□ -1.93
HMGB1P1-201ENST00000522557 PRXQ9BXM0 1461 aa3.02□□□□□ -1.93
HMGB1P1-201ENST00000522557 NPATQ14207 1427 aa3.02□□□□□ -1.93
HMGB1P1-201ENST00000522557 LTBP4Q8N2S1 1624 aa3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 CENPJQ9HC77 1338 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 NKX2-6A6NCS4 301 aa3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 SMCO2A6NFE2 343 aa3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 LYRM9A8MSI8 78 aa3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 SMKR1H3BMG3 65 aa3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 LSM1O15116 133 aaKnown RBP3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 CD5LO43866 347 aa3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 AIREO43918 545 aa3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 HLA-HP01893 362 aa3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 GNAO1P09471 354 aa3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 ATF6P18850 670 aa3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 SRMP19623 302 aa3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 MDKP21741 143 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 TNFSF9P41273 254 aa3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 RND2P52198 227 aa3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 ZNF136P52737 540 aa3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 SLC7A9P82251 487 aa3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 RAD51Q06609 339 aa3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 CLINT1Q14677 625 aa3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 NCF4Q15080 339 aa3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 NKAIN1Q4KMZ8 207 aa3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 BEX5Q5H9J7 111 aa3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 ANKRD22Q5VYY1 191 aa3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 NPWQ8N729 165 aa3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 TTC29Q8NA56 475 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 LRRC75AQ8NAA5 344 aa3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 RNF138Q8WVD3 245 aa3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 GEMIN6Q8WXD5 167 aaKnown RBP3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 SRSF12Q8WXF0 261 aaKnown RBP3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 SERPINB12Q96P63 405 aa3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 C8orf33Q9H7E9 229 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 NANOGQ9H9S0 305 aa3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 CYP3A43Q9HB55 503 aa3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 RETNQ9HD89 108 aa3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 PRSS16Q9NQE7 514 aa3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 CLN6Q9NWW5 311 aa3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 RPS6KB2Q9UBS0 482 aa3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 RCL1Q9Y2P8 373 aaKnown RBP3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 RHBDD3Q9Y3P4 386 aa3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 ARHGEF12Q9NZN5 1544 aa3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 NUP153P49790 1475 aaKnown RBP3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 ZNF518AQ6AHZ1 1483 aa3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 SHANK2Q9UPX8 1470 aa3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 HECW1Q76N89 1606 aa3.01□□□□□ -1.93
HMGB1P1-201ENST00000522557 NOTCH2Q04721 2471 aa3□□□□□ -1.93
HMGB1P1-201ENST00000522557 NFASCO94856 1347 aa3□□□□□ -1.93
HMGB1P1-201ENST00000522557 A6NDN8 102 aa3□□□□□ -1.93
HMGB1P1-201ENST00000522557 XKRYO14609 159 aa3□□□□□ -1.93
HMGB1P1-201ENST00000522557 TRDMT1O14717 391 aaKnown RBP3□□□□□ -1.93
HMGB1P1-201ENST00000522557 RTL8CO15255 209 aa3□□□□□ -1.93
HMGB1P1-201ENST00000522557 ERI3O43414 337 aaKnown RBP3□□□□□ -1.93
HMGB1P1-201ENST00000522557 FCN3O75636 299 aa3□□□□□ -1.93
HMGB1P1-201ENST00000522557 SNAI1O95863 264 aaPredicted RBP3□□□□□ -1.93
HMGB1P1-201ENST00000522557 PCCAP05165 728 aaPredicted RBP3□□□□□ -1.93
HMGB1P1-201ENST00000522557 CRYGCP07315 174 aa3□□□□□ -1.93
HMGB1P1-201ENST00000522557 DCNP07585 359 aaKnown RBP3□□□□□ -1.93
HMGB1P1-201ENST00000522557 UBTFL6P0CB48 400 aaPredicted RBP3□□□□□ -1.93
HMGB1P1-201ENST00000522557 MGMTP16455 207 aa3□□□□□ -1.93
HMGB1P1-201ENST00000522557 CXCL5P42830 114 aa3□□□□□ -1.93
HMGB1P1-201ENST00000522557 MAGEA1P43355 309 aa3□□□□□ -1.93
HMGB1P1-201ENST00000522557 NMUP48645 174 aa3□□□□□ -1.93
HMGB1P1-201ENST00000522557 RAB11AP62491 216 aa3□□□□□ -1.93
HMGB1P1-201ENST00000522557 MPPED2Q15777 294 aa3□□□□□ -1.93
HMGB1P1-201ENST00000522557 RAB11BQ15907 218 aa3□□□□□ -1.93
HMGB1P1-201ENST00000522557 RPEL1Q2QD12 228 aa3□□□□□ -1.93
HMGB1P1-201ENST00000522557 TWF2Q6IBS0 349 aaKnown RBP3□□□□□ -1.93
HMGB1P1-201ENST00000522557 ZNF493Q6ZR52 646 aa3□□□□□ -1.93
HMGB1P1-201ENST00000522557 CMC1Q7Z7K0 106 aa3□□□□□ -1.93
HMGB1P1-201ENST00000522557 TMEM150AQ86TG1 271 aa3□□□□□ -1.93
HMGB1P1-201ENST00000522557 ZNF429Q86V71 674 aa3□□□□□ -1.93
HMGB1P1-201ENST00000522557 MICU2Q8IYU8 434 aa3□□□□□ -1.93
HMGB1P1-201ENST00000522557 NOXO1Q8NFA2 376 aa3□□□□□ -1.93
HMGB1P1-201ENST00000522557 OR51G1Q8NGK1 321 aa3□□□□□ -1.93
HMGB1P1-201ENST00000522557 FAM104AQ969W3 186 aa3□□□□□ -1.93
HMGB1P1-201ENST00000522557 GALNT14Q96FL9 552 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms