RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 SLC9A3R1O14745 358 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P46-201ENST00000520062 MEGF6O75095 1541 aa3.57□□□□□ -1.84
HMGB1P46-201ENST00000520062 FLOT1O75955 427 aa3.57□□□□□ -1.84
HMGB1P46-201ENST00000520062 TRBC1P01850 177 aa3.57□□□□□ -1.84
HMGB1P46-201ENST00000520062 GNAO1P09471 354 aa3.57□□□□□ -1.84
HMGB1P46-201ENST00000520062 WARSP23381 471 aaKnown RBP3.57□□□□□ -1.84
HMGB1P46-201ENST00000520062 MAS1LP35410 378 aa3.57□□□□□ -1.84
HMGB1P46-201ENST00000520062 CXCL5P42830 114 aa3.57□□□□□ -1.84
HMGB1P46-201ENST00000520062 BCAP31P51572 246 aa3.57□□□□□ -1.84
HMGB1P46-201ENST00000520062 CRISP3P54108 245 aa3.57□□□□□ -1.84
HMGB1P46-201ENST00000520062 HERVK_113P61574 105 aa3.57□□□□□ -1.84
HMGB1P46-201ENST00000520062 ZSCAN26Q16670 478 aa3.57□□□□□ -1.84
HMGB1P46-201ENST00000520062 TRMT5Q32P41 509 aaKnown RBP3.57□□□□□ -1.84
HMGB1P46-201ENST00000520062 PIGGQ5H8A4 983 aa3.57□□□□□ -1.84
HMGB1P46-201ENST00000520062 TPTE2P1Q5T6R2 138 aa3.57□□□□□ -1.84
HMGB1P46-201ENST00000520062 MBOAT2Q6ZWT7 520 aa3.57□□□□□ -1.84
HMGB1P46-201ENST00000520062 CARMIL3Q8ND23 1372 aa3.57□□□□□ -1.84
HMGB1P46-201ENST00000520062 OR10G4Q8NGN3 311 aa3.57□□□□□ -1.84
HMGB1P46-201ENST00000520062 IL22RA2Q969J5 263 aa3.57□□□□□ -1.84
HMGB1P46-201ENST00000520062 RNF185Q96GF1 192 aa3.57□□□□□ -1.84
HMGB1P46-201ENST00000520062 ZIM3Q96PE6 472 aa3.57□□□□□ -1.84
HMGB1P46-201ENST00000520062 BEX1Q9HBH7 125 aa3.57□□□□□ -1.84
HMGB1P46-201ENST00000520062 ACP6Q9NPH0 428 aa3.57□□□□□ -1.84
HMGB1P46-201ENST00000520062 TMEM9BQ9NQ34 198 aa3.57□□□□□ -1.84
HMGB1P46-201ENST00000520062 AGPAT4Q9NRZ5 378 aa3.57□□□□□ -1.84
HMGB1P46-201ENST00000520062 TNIKQ9UKE5 1360 aa3.57□□□□□ -1.84
HMGB1P46-201ENST00000520062 KIF27Q86VH2 1401 aa3.56□□□□□ -1.84
HMGB1P46-201ENST00000520062 PINLYPA6NC86 204 aa3.56□□□□□ -1.84
HMGB1P46-201ENST00000520062 A6NDX4 124 aa3.56□□□□□ -1.84
HMGB1P46-201ENST00000520062 FAM166BA8MTA8 275 aa3.56□□□□□ -1.84
HMGB1P46-201ENST00000520062 ZNF99A8MXY4 864 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P46-201ENST00000520062 PANO1I0J062 215 aa3.56□□□□□ -1.84
HMGB1P46-201ENST00000520062 PES1O00541 588 aaKnown RBP3.56□□□□□ -1.84
HMGB1P46-201ENST00000520062 XRCC2O43543 280 aa3.56□□□□□ -1.84
HMGB1P46-201ENST00000520062 SS18L1O75177 396 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P46-201ENST00000520062 FARS2O95363 451 aaKnown RBP3.56□□□□□ -1.84
HMGB1P46-201ENST00000520062 TACSTD2P09758 323 aa3.56□□□□□ -1.84
HMGB1P46-201ENST00000520062 NR2C1P13056 603 aa3.56□□□□□ -1.84
HMGB1P46-201ENST00000520062 ATF6P18850 670 aa3.56□□□□□ -1.84
HMGB1P46-201ENST00000520062 RAB4AP20338 218 aa3.56□□□□□ -1.84
HMGB1P46-201ENST00000520062 NBL1P41271 181 aa3.56□□□□□ -1.84
HMGB1P46-201ENST00000520062 CYB561P49447 251 aa3.56□□□□□ -1.84
HMGB1P46-201ENST00000520062 LHX2P50458 406 aa3.56□□□□□ -1.84
HMGB1P46-201ENST00000520062 RND2P52198 227 aa3.56□□□□□ -1.84
HMGB1P46-201ENST00000520062 UBE2MP61081 183 aaKnown RBP3.56□□□□□ -1.84
HMGB1P46-201ENST00000520062 RPS15AP62244 130 aaKnown RBP3.56□□□□□ -1.84
HMGB1P46-201ENST00000520062 SEMG2Q02383 582 aa3.56□□□□□ -1.84
HMGB1P46-201ENST00000520062 ZNF33AQ06730 810 aa3.56□□□□□ -1.84
HMGB1P46-201ENST00000520062 POU2AF1Q16633 256 aa3.56□□□□□ -1.84
HMGB1P46-201ENST00000520062 RPEL1Q2QD12 228 aa3.56□□□□□ -1.84
HMGB1P46-201ENST00000520062 CHRFAM7AQ494W8 412 aa3.56□□□□□ -1.84
HMGB1P46-201ENST00000520062 ULK3Q6PHR2 472 aa3.56□□□□□ -1.84
HMGB1P46-201ENST00000520062 MRPL21Q7Z2W9 205 aaKnown RBP3.56□□□□□ -1.84
HMGB1P46-201ENST00000520062 CBLN2Q8IUK8 224 aa3.56□□□□□ -1.84
HMGB1P46-201ENST00000520062 C11orf53Q8IXP5 236 aa3.56□□□□□ -1.84
HMGB1P46-201ENST00000520062 Q8N9W7 124 aa3.56□□□□□ -1.84
HMGB1P46-201ENST00000520062 OR5T3Q8NGG3 340 aa3.56□□□□□ -1.84
HMGB1P46-201ENST00000520062 GIMAP1Q8WWP7 306 aa3.56□□□□□ -1.84
HMGB1P46-201ENST00000520062 EXOSC8Q96B26 276 aaKnown RBP3.56□□□□□ -1.84
HMGB1P46-201ENST00000520062 CDC42EP4Q9H3Q1 356 aaKnown RBP3.56□□□□□ -1.84
HMGB1P46-201ENST00000520062 MRM3Q9HC36 420 aaKnown RBP3.56□□□□□ -1.84
HMGB1P46-201ENST00000520062 ISYNA1Q9NPH2 558 aa3.56□□□□□ -1.84
HMGB1P46-201ENST00000520062 YARS2Q9Y2Z4 477 aaKnown RBP3.56□□□□□ -1.84
HMGB1P46-201ENST00000520062 IGLV11-55A0A075B6I3 123 aa3.55□□□□□ -1.84
HMGB1P46-201ENST00000520062 TRAV6A0A075B6T7 132 aa3.55□□□□□ -1.84
HMGB1P46-201ENST00000520062 IGLV1-36A0A0B4J1U3 117 aa3.55□□□□□ -1.84
HMGB1P46-201ENST00000520062 A0A1B0GUH1 482 aa3.55□□□□□ -1.84
HMGB1P46-201ENST00000520062 CIB4A0PJX0 185 aa3.55□□□□□ -1.84
HMGB1P46-201ENST00000520062 BOLA2-SMG1P6H3BVE0 249 aa3.55□□□□□ -1.84
HMGB1P46-201ENST00000520062 SIVA1O15304 175 aa3.55□□□□□ -1.84
HMGB1P46-201ENST00000520062 HSBP1O75506 76 aa3.55□□□□□ -1.84
HMGB1P46-201ENST00000520062 HPRT1P00492 218 aa3.55□□□□□ -1.84
HMGB1P46-201ENST00000520062 PCCAP05165 728 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P46-201ENST00000520062 ADRB3P13945 408 aa3.55□□□□□ -1.84
HMGB1P46-201ENST00000520062 GGT1P19440 569 aa3.55□□□□□ -1.84
HMGB1P46-201ENST00000520062 RFC3P40938 356 aa3.55□□□□□ -1.84
HMGB1P46-201ENST00000520062 GPR1P46091 355 aa3.55□□□□□ -1.84
HMGB1P46-201ENST00000520062 ZNF138P52744 262 aa3.55□□□□□ -1.84
HMGB1P46-201ENST00000520062 VSX2P58304 361 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P46-201ENST00000520062 KRTAP10-6P60371 365 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P46-201ENST00000520062 PTPN20Q4JDL3 420 aa3.55□□□□□ -1.84
HMGB1P46-201ENST00000520062 HSP90AA4PQ58FG1 418 aa3.55□□□□□ -1.84
HMGB1P46-201ENST00000520062 MYOCDQ8IZQ8 938 aa3.55□□□□□ -1.84
HMGB1P46-201ENST00000520062 MDS2Q8NDY4 140 aa3.55□□□□□ -1.84
HMGB1P46-201ENST00000520062 NOXO1Q8NFA2 376 aa3.55□□□□□ -1.84
HMGB1P46-201ENST00000520062 OR52E2Q8NGJ4 325 aa3.55□□□□□ -1.84
HMGB1P46-201ENST00000520062 CA5BP1Q8WTZ4 195 aa3.55□□□□□ -1.84
HMGB1P46-201ENST00000520062 RNF138Q8WVD3 245 aa3.55□□□□□ -1.84
HMGB1P46-201ENST00000520062 APH1BQ8WW43 257 aa3.55□□□□□ -1.84
HMGB1P46-201ENST00000520062 COL21A1Q96P44 957 aa3.55□□□□□ -1.84
HMGB1P46-201ENST00000520062 CALN1Q9BXU9 219 aa3.55□□□□□ -1.84
HMGB1P46-201ENST00000520062 DEFB129Q9H1M3 183 aa3.55□□□□□ -1.84
HMGB1P46-201ENST00000520062 CD209Q9NNX6 404 aa3.55□□□□□ -1.84
HMGB1P46-201ENST00000520062 ANAPC11Q9NYG5 84 aa3.55□□□□□ -1.84
HMGB1P46-201ENST00000520062 PSG8Q9UQ74 426 aa3.55□□□□□ -1.84
HMGB1P46-201ENST00000520062 ADAMTS9Q9P2N4 1935 aa3.54□□□□□ -1.84
HMGB1P46-201ENST00000520062 ADGRA3Q8IWK6 1321 aa3.54□□□□□ -1.84
HMGB1P46-201ENST00000520062 IGHV3-74A0A0B4J1X5 117 aa3.54□□□□□ -1.84
HMGB1P46-201ENST00000520062 A0A1B0GVY2 172 aa3.54□□□□□ -1.84
HMGB1P46-201ENST00000520062 A0A1W2PPV4 95 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms