RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 TNFSF10P50591 281 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 MMP16P51512 607 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 OR10A3P58181 314 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 HIST1H3AP68431 136 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 MFGE8Q08431 387 aaPredicted RBP4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 CDC20Q12834 499 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 RIN1Q13671 783 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 SLC10A1Q14973 349 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 OXA1LQ15070 435 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 ZNF79Q15937 498 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 RGS21Q2M5E4 152 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 SLC25A35Q3KQZ1 300 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 HSD17B12Q53GQ0 312 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 ZNF766Q5HY98 468 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 RNFT1Q5M7Z0 435 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 PDSS1Q5T2R2 415 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 IDNKQ5T6J7 187 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 HIST2H3PS2Q5TEC6 136 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 XKRXQ6PP77 449 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 CORO6Q6QEF8 472 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 STAC2Q6ZMT1 411 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 CFAP77Q6ZQR2 320 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 DCDC5Q6ZRR9 648 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 HIST2H3AQ71DI3 136 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 FCRLAQ7L513 359 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 LRRTM1Q86UE6 522 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 SLC22A16Q86VW1 577 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 ZGRF1Q86YA3 2104 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 SNX29P2Q8IUI4 249 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 LYSMD2Q8IV50 215 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 LINC00346Q8IVM7 164 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 RDH10Q8IZV5 341 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 CENPSQ8N2Z9 138 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 GDPD1Q8N9F7 314 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 FDCSPQ8NFU4 85 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 OR51A4Q8NGJ6 313 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 OR10AC1Q8NH08 325 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 GPR148Q8TDV2 347 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 ROBO4Q8WZ75 1007 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 THRSPQ92748 146 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 ABTB1Q969K4 478 aaPredicted RBP4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 PPP1R14AQ96A00 147 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 PNPLA2Q96AD5 504 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 NABP1Q96AH0 204 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 TMEM45BQ96B21 275 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 ZNF845Q96IR2 970 aaPredicted RBP4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 CEP19Q96LK0 163 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 GFI1Q99684 422 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 SRRQ9GZT4 340 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 COMMD4Q9H0A8 199 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 PPP1R3EQ9H7J1 279 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 ZDHHC11Q9H8X9 412 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 EMC7Q9NPA0 242 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 B3GAT2Q9NPZ5 323 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 CYSLTR2Q9NS75 346 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 FAM206AQ9NX38 181 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 COMMD3Q9UBI1 195 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 GDF2Q9UK05 429 aaPredicted RBP4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 SLC22A13Q9Y226 551 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 SSUH2Q9Y2M2 353 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 PTPRQQ9UMZ3 2332 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 CFAP47Q6ZTR5 3102 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 SPTBN4Q9H254 2564 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 MGAQ8IWI9 3026 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 ASPMQ8IZT6 3477 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 PRR14LQ5THK1 2151 aa4.8□□□□□ -1.64
SCARNA20.4-201ENST00000516969 TRAV8-7A0A075B6U6 113 aa4.79□□□□□ -1.64
SCARNA20.4-201ENST00000516969 TMEM269A0A1B0GVZ9 245 aa4.79□□□□□ -1.64
SCARNA20.4-201ENST00000516969 A0A1W2PPL8 197 aa4.79□□□□□ -1.64
SCARNA20.4-201ENST00000516969 FABP12A6NFH5 140 aa4.79□□□□□ -1.64
SCARNA20.4-201ENST00000516969 ACOD1A6NK06 481 aa4.79□□□□□ -1.64
SCARNA20.4-201ENST00000516969 IFITM5A6NNB3 132 aa4.79□□□□□ -1.64
SCARNA20.4-201ENST00000516969 FAM166BA8MTA8 275 aa4.79□□□□□ -1.64
SCARNA20.4-201ENST00000516969 PDCD5O14737 125 aa4.79□□□□□ -1.64
SCARNA20.4-201ENST00000516969 DHHO43323 396 aa4.79□□□□□ -1.64
SCARNA20.4-201ENST00000516969 TBX1O43435 398 aa4.79□□□□□ -1.64
SCARNA20.4-201ENST00000516969 HPGDSO60760 199 aa4.79□□□□□ -1.64
SCARNA20.4-201ENST00000516969 SLC19A2O60779 497 aa4.79□□□□□ -1.64
SCARNA20.4-201ENST00000516969 ITGB2P05107 769 aa4.79□□□□□ -1.64
SCARNA20.4-201ENST00000516969 OCM2P0CE71 109 aa4.79□□□□□ -1.64
SCARNA20.4-201ENST00000516969 CPN1P15169 458 aa4.79□□□□□ -1.64
SCARNA20.4-201ENST00000516969 ADRA2CP18825 462 aa4.79□□□□□ -1.64
SCARNA20.4-201ENST00000516969 ATF1P18846 271 aa4.79□□□□□ -1.64
SCARNA20.4-201ENST00000516969 ELK1P19419 428 aa4.79□□□□□ -1.64
SCARNA20.4-201ENST00000516969 NPR2P20594 1047 aa4.79□□□□□ -1.64
SCARNA20.4-201ENST00000516969 MSR1P21757 451 aa4.79□□□□□ -1.64
SCARNA20.4-201ENST00000516969 EIF1AXP47813 144 aaKnown RBP4.79□□□□□ -1.64
SCARNA20.4-201ENST00000516969 SELENOPP49908 381 aa4.79□□□□□ -1.64
SCARNA20.4-201ENST00000516969 CCL11P51671 97 aa4.79□□□□□ -1.64
SCARNA20.4-201ENST00000516969 ARG2P78540 354 aa4.79□□□□□ -1.64
SCARNA20.4-201ENST00000516969 MRPS34P82930 218 aaKnown RBP4.79□□□□□ -1.64
SCARNA20.4-201ENST00000516969 PLGLB1Q02325 96 aa4.79□□□□□ -1.64
SCARNA20.4-201ENST00000516969 ENDOGQ14249 297 aaKnown RBP4.79□□□□□ -1.64
SCARNA20.4-201ENST00000516969 RSPO1Q2MKA7 263 aaPredicted RBP4.79□□□□□ -1.64
SCARNA20.4-201ENST00000516969 RIPPLY2Q5TAB7 128 aa4.79□□□□□ -1.64
SCARNA20.4-201ENST00000516969 FAM27BQ5VT28 67 aa4.79□□□□□ -1.64
SCARNA20.4-201ENST00000516969 STEAP3Q658P3 488 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms