RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 GATA3P23771 443 aa6.11□□□□□ -1.43
USP46-208ENST00000512656 STOMP27105 288 aa6.11□□□□□ -1.43
USP46-208ENST00000512656 LIPAP38571 399 aa6.11□□□□□ -1.43
USP46-208ENST00000512656 GDI2P50395 445 aaKnown RBP6.11□□□□□ -1.43
USP46-208ENST00000512656 ZNF133P52736 654 aaPredicted RBP6.11□□□□□ -1.43
USP46-208ENST00000512656 UGT2B15P54855 530 aa6.11□□□□□ -1.43
USP46-208ENST00000512656 KRTAP10-2P60368 255 aa6.11□□□□□ -1.43
USP46-208ENST00000512656 PCBD1P61457 104 aa6.11□□□□□ -1.43
USP46-208ENST00000512656 RUNX1T1Q06455 604 aa6.11□□□□□ -1.43
USP46-208ENST00000512656 RPL18Q07020 188 aaKnown RBP6.11□□□□□ -1.43
USP46-208ENST00000512656 CD47Q08722 323 aa6.11□□□□□ -1.43
USP46-208ENST00000512656 SELPLGQ14242 412 aa6.11□□□□□ -1.43
USP46-208ENST00000512656 SGCAQ16586 387 aa6.11□□□□□ -1.43
USP46-208ENST00000512656 PABPC1L2AQ5JQF8 200 aa6.11□□□□□ -1.43
USP46-208ENST00000512656 AVPI1Q5T686 147 aa6.11□□□□□ -1.43
USP46-208ENST00000512656 NANOGP8Q6NSW7 305 aa6.11□□□□□ -1.43
USP46-208ENST00000512656 ERICH5Q6P6B1 374 aa6.11□□□□□ -1.43
USP46-208ENST00000512656 USP51Q70EK9 711 aa6.11□□□□□ -1.43
USP46-208ENST00000512656 ZER1Q7Z7L7 766 aa6.11□□□□□ -1.43
USP46-208ENST00000512656 PEG10Q86TG7 708 aaKnown RBP6.11□□□□□ -1.43
USP46-208ENST00000512656 LRRC18Q8N456 261 aa6.11□□□□□ -1.43
USP46-208ENST00000512656 PAQR4Q8N4S7 273 aaPredicted RBP6.11□□□□□ -1.43
USP46-208ENST00000512656 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.11□□□□□ -1.43
USP46-208ENST00000512656 LINC00482Q8N8I6 264 aa6.11□□□□□ -1.43
USP46-208ENST00000512656 SEMA6DQ8NFY4 1073 aa6.11□□□□□ -1.43
USP46-208ENST00000512656 OR4D11Q8NGI4 311 aa6.11□□□□□ -1.43
USP46-208ENST00000512656 OR1J1Q8NGS3 322 aa6.11□□□□□ -1.43
USP46-208ENST00000512656 FAM216AQ8WUB2 273 aa6.11□□□□□ -1.43
USP46-208ENST00000512656 TMEM239Q8WW34 195 aa6.11□□□□□ -1.43
USP46-208ENST00000512656 LIPHQ8WWY8 451 aa6.11□□□□□ -1.43
USP46-208ENST00000512656 ASB10Q8WXI3 467 aa6.11□□□□□ -1.43
USP46-208ENST00000512656 GCDHQ92947 438 aaPredicted RBP6.11□□□□□ -1.43
USP46-208ENST00000512656 MAGEB18Q96M61 343 aa6.11□□□□□ -1.43
USP46-208ENST00000512656 RBP7Q96R05 134 aa6.11□□□□□ -1.43
USP46-208ENST00000512656 ZNF347Q96SE7 839 aa6.11□□□□□ -1.43
USP46-208ENST00000512656 SEPHS2Q99611 448 aa6.11□□□□□ -1.43
USP46-208ENST00000512656 ECSITQ9BQ95 431 aa6.11□□□□□ -1.43
USP46-208ENST00000512656 PRSS27Q9BQR3 290 aa6.11□□□□□ -1.43
USP46-208ENST00000512656 ALG12Q9BV10 488 aa6.11□□□□□ -1.43
USP46-208ENST00000512656 RBM4Q9BWF3 364 aaKnown RBP6.11□□□□□ -1.43
USP46-208ENST00000512656 SUCNR1Q9BXA5 334 aa6.11□□□□□ -1.43
USP46-208ENST00000512656 ELOVL3Q9HB03 270 aa6.11□□□□□ -1.43
USP46-208ENST00000512656 MEPEQ9NQ76 525 aaPredicted RBP6.11□□□□□ -1.43
USP46-208ENST00000512656 RIMS3Q9UJD0 308 aa6.11□□□□□ -1.43
USP46-208ENST00000512656 MED31Q9Y3C7 131 aa6.11□□□□□ -1.43
USP46-208ENST00000512656 A0A0G2JND7 137 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 C5orf49A4QMS7 147 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 WNT9BO14905 357 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 PLPP2O43688 288 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 IGHV2-5P01817 119 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 ADH4P08319 380 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 CST2P09228 141 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 ZNF32P17041 273 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 FPR2P25090 351 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 AQP2P41181 271 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 COMPP49747 757 aaPredicted RBP6.1□□□□□ -1.43
USP46-208ENST00000512656 ARHGDIAP52565 204 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 HILS1P60008 231 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 ERVS71-1P61550 626 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 ST3GAL3Q11203 375 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 MAPRE2Q15555 327 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 TSTQ16762 297 aaKnown RBP6.1□□□□□ -1.43
USP46-208ENST00000512656 ANKDD1AQ495B1 522 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 ALG10Q5BKT4 473 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 COQ5Q5HYK3 327 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 THEM4Q5T1C6 240 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 ARMC4Q5T2S8 1044 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 FAM27BQ5VT28 67 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 DCAF12L2Q5VW00 463 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 FAM205BPQ63HN1 556 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 C1QL2Q7Z5L3 287 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 C3orf56Q8N813 242 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 OR8J3Q8NGG0 315 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 NANPQ8TBE9 248 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 ST7LQ8TDW4 575 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 TMEM255BQ8WV15 326 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 LZICQ8WZA0 190 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 CCL17Q92583 94 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 THOC1Q96FV9 657 aaKnown RBP6.1□□□□□ -1.43
USP46-208ENST00000512656 POM121L2Q96KW2 1035 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 TSPAN32Q96QS1 320 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 GAL3ST1Q99999 423 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 SPATA25Q9BR10 227 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 TXNIPQ9H3M7 391 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 G6PC2Q9NQR9 355 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 FBLN5Q9UBX5 448 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 ZDHHC8Q9ULC8 765 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 WIPI2Q9Y4P8 454 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 TIMM10BQ9Y5J6 103 aa6.1□□□□□ -1.43
USP46-208ENST00000512656 LOC105371242A0A075B767 164 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 ISPDA4D126 451 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 A6NIZ1 184 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 BBIP1A8MTZ0 92 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 C12orf71A8MTZ7 269 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 SPRY3O43610 288 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 EDF1O60869 148 aaKnown RBP6.09□□□□□ -1.43
USP46-208ENST00000512656 SLC2A10O95528 541 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 TSPAN19P0C672 248 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 GSTM3P21266 225 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 TUBG1P23258 451 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms