RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 PARP12Q9H0J9 701 aaKnown RBP3.71□□□□□ -1.82
HMGB1P47-201ENST00000511281 DMAP1Q9NPF5 467 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P47-201ENST00000511281 ZC4H2Q9NQZ6 224 aa3.71□□□□□ -1.82
HMGB1P47-201ENST00000511281 DUX4Q9UBX2 424 aa3.71□□□□□ -1.82
HMGB1P47-201ENST00000511281 SCN2AQ99250 2005 aa3.71□□□□□ -1.82
HMGB1P47-201ENST00000511281 IGLV1-36A0A0B4J1U3 117 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 GSTTP1A0A1W2PQM5 241 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 PRSS37A4D1T9 235 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 SLC22A20A6NK97 555 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 NCBP2LA6PVI3 153 aaKnown RBP3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 PES1O00541 588 aaKnown RBP3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 KLF8O95600 359 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 TGM6O95932 706 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 ACTL6AO96019 429 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 RETP07949 1114 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 STAG3L2P0CL84 134 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 OR5H8P0DN80 308 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 NR2C1P13056 603 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 ELK1P19419 428 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 RAB3BP20337 219 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 CCNE1P24864 410 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 CFHR2P36980 270 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 RFC3P40938 356 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 GPR1P46091 355 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 RND2P52198 227 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 PRR3P79522 188 aaKnown RBP3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 SLC7A9P82251 487 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 CDH17Q12864 832 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 HSP90AA4PQ58FG1 418 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 TPTE2P1Q5T6R2 138 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 GPR107Q5VW38 600 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 LINC00336Q6ZUF6 198 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 MBOAT2Q6ZWT7 520 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 MYOCDQ8IZQ8 938 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 NPWQ8N729 165 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 ITFG1Q8TB96 612 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 BLOC1S5Q8TDH9 187 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 CREB3L1Q96BA8 519 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 PHYHIPLQ96FC7 376 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 FAM210BQ96KR6 192 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 NANOGQ9H9S0 305 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 TMEM9BQ9NQ34 198 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 LZTFL1Q9NQ48 299 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 DYRK4Q9NR20 520 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 PCYOX1Q9UHG3 505 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 HEBP2Q9Y5Z4 205 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 MEGF6O75095 1541 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 GAKO14976 1311 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 NFASCO94856 1347 aa3.7□□□□□ -1.82
HMGB1P47-201ENST00000511281 NKX2-6A6NCS4 301 aa3.69□□□□□ -1.82
HMGB1P47-201ENST00000511281 HPRT1P00492 218 aa3.69□□□□□ -1.82
HMGB1P47-201ENST00000511281 MBP02144 154 aa3.69□□□□□ -1.82
HMGB1P47-201ENST00000511281 GNAO1P09471 354 aa3.69□□□□□ -1.82
HMGB1P47-201ENST00000511281 RHOXF2BP0C7M4 288 aa3.69□□□□□ -1.82
HMGB1P47-201ENST00000511281 PNMA6AP0CW24 399 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P47-201ENST00000511281 ZNF17P17021 662 aa3.69□□□□□ -1.82
HMGB1P47-201ENST00000511281 CSNK1DP48730 415 aa3.69□□□□□ -1.82
HMGB1P47-201ENST00000511281 ZNF138P52744 262 aa3.69□□□□□ -1.82
HMGB1P47-201ENST00000511281 CRISP3P54108 245 aa3.69□□□□□ -1.82
HMGB1P47-201ENST00000511281 KRTAP10-12P60413 245 aa3.69□□□□□ -1.82
HMGB1P47-201ENST00000511281 LCN2P80188 198 aa3.69□□□□□ -1.82
HMGB1P47-201ENST00000511281 HMGCS1Q01581 520 aa3.69□□□□□ -1.82
HMGB1P47-201ENST00000511281 STK38Q15208 465 aa3.69□□□□□ -1.82
HMGB1P47-201ENST00000511281 PSG5Q15238 335 aa3.69□□□□□ -1.82
HMGB1P47-201ENST00000511281 CHRFAM7AQ494W8 412 aa3.69□□□□□ -1.82
HMGB1P47-201ENST00000511281 THEM4Q5T1C6 240 aa3.69□□□□□ -1.82
HMGB1P47-201ENST00000511281 WDR82Q6UXN9 313 aa3.69□□□□□ -1.82
HMGB1P47-201ENST00000511281 ASCL4Q6XD76 172 aa3.69□□□□□ -1.82
HMGB1P47-201ENST00000511281 SLC35D2Q76EJ3 337 aa3.69□□□□□ -1.82
HMGB1P47-201ENST00000511281 C6orf120Q7Z4R8 191 aa3.69□□□□□ -1.82
HMGB1P47-201ENST00000511281 OAFQ86UD1 273 aa3.69□□□□□ -1.82
HMGB1P47-201ENST00000511281 ZNF584Q8IVC4 421 aa3.69□□□□□ -1.82
HMGB1P47-201ENST00000511281 TMEM230Q96A57 120 aa3.69□□□□□ -1.82
HMGB1P47-201ENST00000511281 FOXC2Q99958 501 aa3.69□□□□□ -1.82
HMGB1P47-201ENST00000511281 MICU1Q9BPX6 476 aa3.69□□□□□ -1.82
HMGB1P47-201ENST00000511281 RHOXF2Q9BQY4 288 aa3.69□□□□□ -1.82
HMGB1P47-201ENST00000511281 PATZ1Q9HBE1 687 aaKnown RBP3.69□□□□□ -1.82
HMGB1P47-201ENST00000511281 SLCO1B3Q9NPD5 702 aa3.69□□□□□ -1.82
HMGB1P47-201ENST00000511281 ABCB10Q9NRK6 738 aa3.69□□□□□ -1.82
HMGB1P47-201ENST00000511281 MRPS18BQ9Y676 258 aaKnown RBP3.69□□□□□ -1.82
HMGB1P47-201ENST00000511281 SMAD5-AS1Q9Y6J3 95 aa3.69□□□□□ -1.82
HMGB1P47-201ENST00000511281 CARMIL3Q8ND23 1372 aa3.68□□□□□ -1.82
HMGB1P47-201ENST00000511281 IGHV3-64DA0A0J9YX35 117 aa3.68□□□□□ -1.82
HMGB1P47-201ENST00000511281 SUPT3HO75486 399 aa3.68□□□□□ -1.82
HMGB1P47-201ENST00000511281 HSBP1O75506 76 aa3.68□□□□□ -1.82
HMGB1P47-201ENST00000511281 GFAPP14136 432 aa3.68□□□□□ -1.82
HMGB1P47-201ENST00000511281 NMUP48645 174 aa3.68□□□□□ -1.82
HMGB1P47-201ENST00000511281 ZNF121P58317 390 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P47-201ENST00000511281 NDPQ00604 133 aa3.68□□□□□ -1.82
HMGB1P47-201ENST00000511281 TCP10Q12799 353 aa3.68□□□□□ -1.82
HMGB1P47-201ENST00000511281 SMARCB1Q12824 385 aa3.68□□□□□ -1.82
HMGB1P47-201ENST00000511281 FAM58AQ8N1B3 248 aa3.68□□□□□ -1.82
HMGB1P47-201ENST00000511281 CSGALNACT2Q8N6G5 542 aa3.68□□□□□ -1.82
HMGB1P47-201ENST00000511281 CCDC54Q8NEL0 328 aa3.68□□□□□ -1.82
HMGB1P47-201ENST00000511281 NOXO1Q8NFA2 376 aa3.68□□□□□ -1.82
HMGB1P47-201ENST00000511281 OR52E2Q8NGJ4 325 aa3.68□□□□□ -1.82
HMGB1P47-201ENST00000511281 OR8K3Q8NH51 312 aa3.68□□□□□ -1.82
HMGB1P47-201ENST00000511281 OR51F2Q8NH61 342 aa3.68□□□□□ -1.82
HMGB1P47-201ENST00000511281 PIH1D2Q8WWB5 315 aa3.68□□□□□ -1.82
HMGB1P47-201ENST00000511281 RPEQ96AT9 228 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms