RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 CLEC12AQ5QGZ9 265 aa14.88□□□□□ -0.03
CLDND1-221ENST00000510541 KDM4DQ6B0I6 523 aa14.88□□□□□ -0.03
CLDND1-221ENST00000510541 SLC37A3Q8NCC5 494 aa14.88□□□□□ -0.03
CLDND1-221ENST00000510541 OR4Q3Q8NH05 313 aa14.88□□□□□ -0.03
CLDND1-221ENST00000510541 C11orf40Q8WZ69 217 aa14.88□□□□□ -0.03
CLDND1-221ENST00000510541 COQ7Q99807 217 aa14.88□□□□□ -0.03
CLDND1-221ENST00000510541 HDHD2Q9H0R4 259 aa14.88□□□□□ -0.03
CLDND1-221ENST00000510541 FN3KQ9H479 309 aa14.88□□□□□ -0.03
CLDND1-221ENST00000510541 MARCH7Q9H992 704 aa14.88□□□□□ -0.03
CLDND1-221ENST00000510541 ELOVL3Q9HB03 270 aa14.88□□□□□ -0.03
CLDND1-221ENST00000510541 CDH20Q9HBT6 801 aa14.88□□□□□ -0.03
CLDND1-221ENST00000510541 RPRD1BQ9NQG5 326 aaKnown RBP14.88□□□□□ -0.03
CLDND1-221ENST00000510541 DLL4Q9NR61 685 aa14.88□□□□□ -0.03
CLDND1-221ENST00000510541 CYB5R1Q9UHQ9 305 aa14.88□□□□□ -0.03
CLDND1-221ENST00000510541 LOC100509620A0A075B734 347 aa14.87□□□□□ -0.03
CLDND1-221ENST00000510541 RIIAD1A6NNX1 92 aa14.87□□□□□ -0.03
CLDND1-221ENST00000510541 CSF3P09919 207 aa14.87□□□□□ -0.03
CLDND1-221ENST00000510541 RGS6P49758 472 aa14.87□□□□□ -0.03
CLDND1-221ENST00000510541 GDI2P50395 445 aaKnown RBP14.87□□□□□ -0.03
CLDND1-221ENST00000510541 RAB35Q15286 201 aa14.87□□□□□ -0.03
CLDND1-221ENST00000510541 KRTAP27-1Q3LI81 207 aa14.87□□□□□ -0.03
CLDND1-221ENST00000510541 VASH1Q7L8A9 365 aaPredicted RBP14.87□□□□□ -0.03
CLDND1-221ENST00000510541 ATG16L2Q8NAA4 619 aa14.87□□□□□ -0.03
CLDND1-221ENST00000510541 SDR9C7Q8NEX9 313 aa14.87□□□□□ -0.03
CLDND1-221ENST00000510541 CACNG6Q9BXT2 260 aa14.87□□□□□ -0.03
CLDND1-221ENST00000510541 MS4A5Q9H3V2 200 aa14.87□□□□□ -0.03
CLDND1-221ENST00000510541 PAPOLBQ9NRJ5 636 aaKnown RBP14.87□□□□□ -0.03
CLDND1-221ENST00000510541 EIF3KQ9UBQ5 218 aaKnown RBP14.87□□□□□ -0.03
CLDND1-221ENST00000510541 CGGBP1Q9UFW8 167 aaPredicted RBP14.87□□□□□ -0.03
CLDND1-221ENST00000510541 GPR160Q9UJ42 338 aa14.87□□□□□ -0.03
CLDND1-221ENST00000510541 ITGB1BP2Q9UKP3 347 aa14.87□□□□□ -0.03
CLDND1-221ENST00000510541 FLNAP21333 2647 aaKnown RBP14.86□□□□□ -0.03
CLDND1-221ENST00000510541 F12P00748 615 aaPredicted RBP14.86□□□□□ -0.03
CLDND1-221ENST00000510541 TFP02787 698 aa14.86□□□□□ -0.03
CLDND1-221ENST00000510541 APEX1P27695 318 aaKnown RBP14.86□□□□□ -0.03
CLDND1-221ENST00000510541 GGT2P36268 569 aa14.86□□□□□ -0.03
CLDND1-221ENST00000510541 DAPP51397 102 aa14.86□□□□□ -0.03
CLDND1-221ENST00000510541 EFNA4P52798 201 aa14.86□□□□□ -0.03
CLDND1-221ENST00000510541 SELENOVP59797 346 aa14.86□□□□□ -0.03
CLDND1-221ENST00000510541 TEKQ02763 1124 aa14.86□□□□□ -0.03
CLDND1-221ENST00000510541 FAM209AQ5JX71 171 aa14.86□□□□□ -0.03
CLDND1-221ENST00000510541 Q5PR19 223 aa14.86□□□□□ -0.03
CLDND1-221ENST00000510541 SLC35F1Q5T1Q4 408 aa14.86□□□□□ -0.03
CLDND1-221ENST00000510541 MBNL2Q5VZF2 373 aaKnown RBP14.86□□□□□ -0.03
CLDND1-221ENST00000510541 NEU4Q8WWR8 484 aaPredicted RBP14.86□□□□□ -0.03
CLDND1-221ENST00000510541 TSSK2Q96PF2 358 aa14.86□□□□□ -0.03
CLDND1-221ENST00000510541 PRRG3Q9BZD7 231 aa14.86□□□□□ -0.03
CLDND1-221ENST00000510541 SRA1Q9HD15 236 aaKnown RBP14.86□□□□□ -0.03
CLDND1-221ENST00000510541 ASH2LQ9UBL3 628 aa14.86□□□□□ -0.03
CLDND1-221ENST00000510541 LHFPL6Q9Y693 200 aa14.86□□□□□ -0.03
CLDND1-221ENST00000510541 VPS13CQ709C8 3753 aa14.85□□□□□ -0.03
CLDND1-221ENST00000510541 H3BN98 237 aa14.85□□□□□ -0.03
CLDND1-221ENST00000510541 SURF4O15260 269 aa14.85□□□□□ -0.03
CLDND1-221ENST00000510541 PRODHO43272 600 aa14.85□□□□□ -0.03
CLDND1-221ENST00000510541 SOX14O95416 240 aa14.85□□□□□ -0.03
CLDND1-221ENST00000510541 IGHV3-13P01766 116 aa14.85□□□□□ -0.03
CLDND1-221ENST00000510541 PAICSP22234 425 aaKnown RBP14.85□□□□□ -0.03
CLDND1-221ENST00000510541 PRKACGP22612 351 aa14.85□□□□□ -0.03
CLDND1-221ENST00000510541 LIPAP38571 399 aa14.85□□□□□ -0.03
CLDND1-221ENST00000510541 CRISP1P54107 249 aa14.85□□□□□ -0.03
CLDND1-221ENST00000510541 EFNB1P98172 346 aa14.85□□□□□ -0.03
CLDND1-221ENST00000510541 PPP2R2BQ00005 443 aa14.85□□□□□ -0.03
CLDND1-221ENST00000510541 CRMP1Q14194 572 aa14.85□□□□□ -0.03
CLDND1-221ENST00000510541 CCDC92Q53HC0 331 aaPredicted RBP14.85□□□□□ -0.03
CLDND1-221ENST00000510541 SLC35D3Q5M8T2 416 aa14.85□□□□□ -0.03
CLDND1-221ENST00000510541 LINC01590Q5TEZ4 76 aa14.85□□□□□ -0.03
CLDND1-221ENST00000510541 KRT80Q6KB66 452 aa14.85□□□□□ -0.03
CLDND1-221ENST00000510541 RGS7BPQ6MZT1 257 aaPredicted RBP14.85□□□□□ -0.03
CLDND1-221ENST00000510541 SLC18B1Q6NT16 456 aa14.85□□□□□ -0.03
CLDND1-221ENST00000510541 UGT2A3Q6UWM9 527 aa14.85□□□□□ -0.03
CLDND1-221ENST00000510541 COLCA1Q6ZS62 124 aa14.85□□□□□ -0.03
CLDND1-221ENST00000510541 HS3ST5Q8IZT8 346 aa14.85□□□□□ -0.03
CLDND1-221ENST00000510541 HTRA1Q92743 480 aa14.85□□□□□ -0.03
CLDND1-221ENST00000510541 PTP4A1Q93096 173 aa14.85□□□□□ -0.03
CLDND1-221ENST00000510541 PERPQ96FX8 193 aa14.85□□□□□ -0.03
CLDND1-221ENST00000510541 EMC7Q9NPA0 242 aa14.85□□□□□ -0.03
CLDND1-221ENST00000510541 DDX28Q9NUL7 540 aaKnown RBP14.85□□□□□ -0.03
CLDND1-221ENST00000510541 MRPL22Q9NWU5 206 aaKnown RBP14.85□□□□□ -0.03
CLDND1-221ENST00000510541 SLCO1C1Q9NYB5 712 aa14.85□□□□□ -0.03
CLDND1-221ENST00000510541 NKIRAS2Q9NYR9 191 aa14.85□□□□□ -0.03
CLDND1-221ENST00000510541 MED13LQ71F56 2210 aa14.85□□□□□ -0.03
CLDND1-221ENST00000510541 H3BNX3 289 aa14.84□□□□□ -0.03
CLDND1-221ENST00000510541 DOK2O60496 412 aa14.84□□□□□ -0.03
CLDND1-221ENST00000510541 IGHV4-39P01824 125 aa14.84□□□□□ -0.03
CLDND1-221ENST00000510541 ERCC1P07992 297 aaPredicted RBP14.84□□□□□ -0.03
CLDND1-221ENST00000510541 IGFBP1P08833 259 aaPredicted RBP14.84□□□□□ -0.03
CLDND1-221ENST00000510541 SPI1P17947 270 aa14.84□□□□□ -0.03
CLDND1-221ENST00000510541 FMO3P31513 532 aa14.84□□□□□ -0.03
CLDND1-221ENST00000510541 OTX1P32242 354 aaPredicted RBP14.84□□□□□ -0.03
CLDND1-221ENST00000510541 MRPS11P82912 194 aaKnown RBP14.84□□□□□ -0.03
CLDND1-221ENST00000510541 GINS1Q14691 196 aa14.84□□□□□ -0.03
CLDND1-221ENST00000510541 KPNB1Q14974 876 aaKnown RBP14.84□□□□□ -0.03
CLDND1-221ENST00000510541 ELFN2Q5R3F8 820 aa14.84□□□□□ -0.03
CLDND1-221ENST00000510541 ACSM5Q6NUN0 579 aa14.84□□□□□ -0.03
CLDND1-221ENST00000510541 ZNF774Q6NX45 483 aa14.84□□□□□ -0.03
CLDND1-221ENST00000510541 PAQR4Q8N4S7 273 aaPredicted RBP14.84□□□□□ -0.03
CLDND1-221ENST00000510541 OR10H5Q8NGA6 315 aa14.84□□□□□ -0.03
CLDND1-221ENST00000510541 OR1F12Q8NHA8 337 aa14.84□□□□□ -0.03
CLDND1-221ENST00000510541 AKR7LQ8NHP1 331 aa14.84□□□□□ -0.03
CLDND1-221ENST00000510541 LRTOMTQ8WZ04 291 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms