RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 SLC22A23A1A5C7 686 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 ZNF785A8K8V0 405 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 LINC01387J3KSC0 135 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 FZD7O75084 574 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 OR7C1O76099 320 aaPredicted RBP2.68□□□□□ -1.98
NEDD4-208ENST00000508342 SCAF4O95104 1147 aaKnown RBP2.68□□□□□ -1.98
NEDD4-208ENST00000508342 UBL3O95164 117 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 IFNA1P01562 189 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 IFNA7P01567 189 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 TK1P04183 234 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 GNAO1P09471 354 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 CTRB1P17538 263 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 PAX6P26367 422 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 FKBP2P26885 142 aaKnown RBP2.68□□□□□ -1.98
NEDD4-208ENST00000508342 MSX2P35548 267 aaPredicted RBP2.68□□□□□ -1.98
NEDD4-208ENST00000508342 SOX18P35713 384 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 SUB1P53999 127 aaKnown RBP eCLIP2.68□□□□□ -1.98
NEDD4-208ENST00000508342 GNB1P62873 340 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 DAG1Q14118 895 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 TBRG1Q3YBR2 411 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 CTRB2Q6GPI1 263 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 HEPHL1Q6MZM0 1159 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 SLC27A4Q6P1M0 643 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 OGFOD3Q6PK18 319 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 UGT2A3Q6UWM9 527 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 UNQ9370/PRO34162Q6UXP9 181 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 SLC36A1Q7Z2H8 476 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 CLEC14AQ86T13 490 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 CARM1Q86X55 608 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 ZNF695Q8IW36 515 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 SVOPLQ8N434 492 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 DNAJC22Q8N4W6 341 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 NAT8LQ8N9F0 302 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 FADS6Q8N9I5 356 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 OR5D14Q8NGL3 314 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 OR2V1Q8NHB1 315 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 CMTM2Q8TAZ6 248 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 ABHD4Q8TB40 342 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 VWCEQ96DN2 955 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 SCARF2Q96GP6 870 aaPredicted RBP2.68□□□□□ -1.98
NEDD4-208ENST00000508342 JMJD8Q96S16 334 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 SLC6A7Q99884 636 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 CHIAQ9BZP6 476 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 ZNF350Q9GZX5 532 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 FN3KRPQ9HA64 309 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 MEPEQ9NQ76 525 aaPredicted RBP2.68□□□□□ -1.98
NEDD4-208ENST00000508342 TAAR3PQ9P1P4 343 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 A3GALT2U3KPV4 340 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 SCN3AQ9NY46 2000 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 DOCK8Q8NF50 2099 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 KANTRA0A1W2PQU2 76 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 TMEM82A0PJX8 343 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 RNF212BA8MTL3 300 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 PRAMEF4O60810 478 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 B3GALT4O96024 378 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 CYC1P08574 325 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 MRPL3P09001 348 aaKnown RBP2.68□□□□□ -1.98
NEDD4-208ENST00000508342 FUT4P22083 530 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 CPT2P23786 658 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 GFRA1P56159 465 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 POU3F1Q03052 451 aaPredicted RBP2.68□□□□□ -1.98
NEDD4-208ENST00000508342 KHDC1Q4VXA5 237 aaKnown RBP2.68□□□□□ -1.98
NEDD4-208ENST00000508342 PLAG1Q6DJT9 500 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 PGAP1Q75T13 922 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 PTOV1Q86YD1 416 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 CMIPQ8IY22 773 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 CADM3Q8N126 398 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 TMEM104Q8NE00 496 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 OR51G2Q8NGK0 314 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 DYNLRB2Q8TF09 96 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 ASB11Q8WXH4 323 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 EID2BQ96D98 161 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 OR7D2Q96RA2 312 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 LPAR3Q9UBY5 353 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 TCRBV16S1A1N1A0A5B0 115 aa2.67□□□□□ -1.98
NEDD4-208ENST00000508342 ANTXRLA6NF34 631 aa2.67□□□□□ -1.98
NEDD4-208ENST00000508342 FABP12A6NFH5 140 aa2.67□□□□□ -1.98
NEDD4-208ENST00000508342 CD300LBA8K4G0 201 aa2.67□□□□□ -1.98
NEDD4-208ENST00000508342 M0QZK8 103 aa2.67□□□□□ -1.98
NEDD4-208ENST00000508342 SPRY3O43610 288 aa2.67□□□□□ -1.98
NEDD4-208ENST00000508342 LCMT2O60294 686 aaKnown RBP2.67□□□□□ -1.98
NEDD4-208ENST00000508342 ZG16O60844 167 aa2.67□□□□□ -1.98
NEDD4-208ENST00000508342 RBBP9O75884 186 aa2.67□□□□□ -1.98
NEDD4-208ENST00000508342 HLA-DPB1P04440 258 aa2.67□□□□□ -1.98
NEDD4-208ENST00000508342 EPXP11678 715 aa2.67□□□□□ -1.98
NEDD4-208ENST00000508342 TBPP20226 339 aa2.67□□□□□ -1.98
NEDD4-208ENST00000508342 S100PP25815 95 aa2.67□□□□□ -1.98
NEDD4-208ENST00000508342 PRDX6P30041 224 aa2.67□□□□□ -1.98
NEDD4-208ENST00000508342 SERPINF1P36955 418 aa2.67□□□□□ -1.98
NEDD4-208ENST00000508342 NPBWR1P48145 328 aa2.67□□□□□ -1.98
NEDD4-208ENST00000508342 ACTA2P62736 377 aa2.67□□□□□ -1.98
NEDD4-208ENST00000508342 ERVK-25P63136 954 aa2.67□□□□□ -1.98
NEDD4-208ENST00000508342 ACTG2P63267 376 aa2.67□□□□□ -1.98
NEDD4-208ENST00000508342 EIF2B1Q14232 305 aaKnown RBP2.67□□□□□ -1.98
NEDD4-208ENST00000508342 CDNFQ49AH0 187 aa2.67□□□□□ -1.98
NEDD4-208ENST00000508342 HSD17B12Q53GQ0 312 aa2.67□□□□□ -1.98
NEDD4-208ENST00000508342 FAM69AQ5T7M9 428 aa2.67□□□□□ -1.98
NEDD4-208ENST00000508342 FOXB2Q5VYV0 432 aa2.67□□□□□ -1.98
NEDD4-208ENST00000508342 SNX29P2Q8IUI4 249 aa2.67□□□□□ -1.98
NEDD4-208ENST00000508342 CNTN4Q8IWV2 1026 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms