RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 ING4Q9UNL4 249 aa2.94□□□□□ -1.94
DHFR-204ENST00000508282 YARS2Q9Y2Z4 477 aaKnown RBP2.94□□□□□ -1.94
DHFR-204ENST00000508282 NACAE9PAV3 2078 aa2.94□□□□□ -1.94
DHFR-204ENST00000508282 IGKV2D-24A0A075B6R9 120 aa2.93□□□□□ -1.94
DHFR-204ENST00000508282 A0A0G2JRQ6 117 aa2.93□□□□□ -1.94
DHFR-204ENST00000508282 GLYATL1P3A0A0U1RQE8 302 aa2.93□□□□□ -1.94
DHFR-204ENST00000508282 PRSS37A4D1T9 235 aa2.93□□□□□ -1.94
DHFR-204ENST00000508282 LYRM9A8MSI8 78 aa2.93□□□□□ -1.94
DHFR-204ENST00000508282 XRCC2O43543 280 aa2.93□□□□□ -1.94
DHFR-204ENST00000508282 EIF3GO75821 320 aaKnown RBP eCLIP2.93□□□□□ -1.94
DHFR-204ENST00000508282 CCL2P13500 99 aa2.93□□□□□ -1.94
DHFR-204ENST00000508282 ZNF250P15622 560 aa2.93□□□□□ -1.94
DHFR-204ENST00000508282 LCN1P31025 176 aa2.93□□□□□ -1.94
DHFR-204ENST00000508282 KLK7P49862 253 aa2.93□□□□□ -1.94
DHFR-204ENST00000508282 MAP3K7CLP57077 242 aa2.93□□□□□ -1.94
DHFR-204ENST00000508282 PSMC5P62195 406 aa2.93□□□□□ -1.94
DHFR-204ENST00000508282 RPS15AP62244 130 aaKnown RBP2.93□□□□□ -1.94
DHFR-204ENST00000508282 SELENOTP62341 195 aa2.93□□□□□ -1.94
DHFR-204ENST00000508282 KCTD19Q17RG1 926 aaPredicted RBP2.93□□□□□ -1.94
DHFR-204ENST00000508282 C1orf94Q6P1W5 598 aa2.93□□□□□ -1.94
DHFR-204ENST00000508282 TMIGD1Q6UXZ0 262 aa2.93□□□□□ -1.94
DHFR-204ENST00000508282 MBOAT1Q6ZNC8 495 aa2.93□□□□□ -1.94
DHFR-204ENST00000508282 TMEM135Q86UB9 458 aa2.93□□□□□ -1.94
DHFR-204ENST00000508282 SPATA24Q86W54 205 aa2.93□□□□□ -1.94
DHFR-204ENST00000508282 FAM71E2Q8N5Q1 922 aa2.93□□□□□ -1.94
DHFR-204ENST00000508282 TRAM1L1Q8N609 369 aa2.93□□□□□ -1.94
DHFR-204ENST00000508282 ZNF740Q8NDX6 193 aa2.93□□□□□ -1.94
DHFR-204ENST00000508282 CHCHD10Q8WYQ3 142 aaPredicted RBP2.93□□□□□ -1.94
DHFR-204ENST00000508282 MED8Q96G25 268 aa2.93□□□□□ -1.94
DHFR-204ENST00000508282 GLT1D1Q96MS3 346 aa2.93□□□□□ -1.94
DHFR-204ENST00000508282 OR5B12Q96R08 314 aa2.93□□□□□ -1.94
DHFR-204ENST00000508282 HINT2Q9BX68 163 aa2.93□□□□□ -1.94
DHFR-204ENST00000508282 RAB1BQ9H0U4 201 aa2.93□□□□□ -1.94
DHFR-204ENST00000508282 DEFB129Q9H1M3 183 aa2.93□□□□□ -1.94
DHFR-204ENST00000508282 PRSS16Q9NQE7 514 aa2.93□□□□□ -1.94
DHFR-204ENST00000508282 ZNF302Q9NR11 478 aa2.93□□□□□ -1.94
DHFR-204ENST00000508282 CD300AQ9UGN4 299 aa2.93□□□□□ -1.94
DHFR-204ENST00000508282 ZNF225Q9UK10 706 aa2.93□□□□□ -1.94
DHFR-204ENST00000508282 ASTN1O14525 1302 aa2.93□□□□□ -1.94
DHFR-204ENST00000508282 MSH6P52701 1360 aa2.92□□□□□ -1.94
DHFR-204ENST00000508282 IGHV3OR16-13A0A075B7E8 117 aa2.92□□□□□ -1.94
DHFR-204ENST00000508282 TSPAN11A1L157 253 aa2.92□□□□□ -1.94
DHFR-204ENST00000508282 RBMY1BA6NDE4 496 aaKnown RBP2.92□□□□□ -1.94
DHFR-204ENST00000508282 RBMY1EA6NEQ0 496 aaKnown RBP2.92□□□□□ -1.94
DHFR-204ENST00000508282 SLC9A3R1O14745 358 aaPredicted RBP2.92□□□□□ -1.94
DHFR-204ENST00000508282 SCAMP2O15127 329 aaKnown RBP2.92□□□□□ -1.94
DHFR-204ENST00000508282 HCRTR1O43613 425 aa2.92□□□□□ -1.94
DHFR-204ENST00000508282 SLC19A2O60779 497 aa2.92□□□□□ -1.94
DHFR-204ENST00000508282 LSM8O95777 96 aaKnown RBP2.92□□□□□ -1.94
DHFR-204ENST00000508282 HBE1P02100 147 aa2.92□□□□□ -1.94
DHFR-204ENST00000508282 RBMY1DP0C7P1 496 aaKnown RBP2.92□□□□□ -1.94
DHFR-204ENST00000508282 RBMY1A1P0DJD3 496 aaKnown RBP2.92□□□□□ -1.94
DHFR-204ENST00000508282 OR1E1P30953 314 aa2.92□□□□□ -1.94
DHFR-204ENST00000508282 SLC26A3P40879 764 aa2.92□□□□□ -1.94
DHFR-204ENST00000508282 AQP2P41181 271 aa2.92□□□□□ -1.94
DHFR-204ENST00000508282 NBL1P41271 181 aa2.92□□□□□ -1.94
DHFR-204ENST00000508282 TWF1Q12792 350 aa2.92□□□□□ -1.94
DHFR-204ENST00000508282 TSC22D1Q15714 1073 aa2.92□□□□□ -1.94
DHFR-204ENST00000508282 ATP6AP1Q15904 470 aa2.92□□□□□ -1.94
DHFR-204ENST00000508282 TRMT5Q32P41 509 aaKnown RBP2.92□□□□□ -1.94
DHFR-204ENST00000508282 VAX1Q5SQQ9 334 aa2.92□□□□□ -1.94
DHFR-204ENST00000508282 C1orf146Q5VVC0 180 aa2.92□□□□□ -1.94
DHFR-204ENST00000508282 CNIH2Q6PI25 160 aa2.92□□□□□ -1.94
DHFR-204ENST00000508282 ASCL4Q6XD76 172 aa2.92□□□□□ -1.94
DHFR-204ENST00000508282 RNF165Q6ZSG1 346 aa2.92□□□□□ -1.94
DHFR-204ENST00000508282 SLC35D2Q76EJ3 337 aa2.92□□□□□ -1.94
DHFR-204ENST00000508282 ZNF547Q8IVP9 402 aa2.92□□□□□ -1.94
DHFR-204ENST00000508282 OR10G3Q8NGC4 313 aa2.92□□□□□ -1.94
DHFR-204ENST00000508282 CLHC1Q8NHS4 586 aa2.92□□□□□ -1.94
DHFR-204ENST00000508282 SUN5Q8TC36 379 aa2.92□□□□□ -1.94
DHFR-204ENST00000508282 FGF14Q92915 247 aa2.92□□□□□ -1.94
DHFR-204ENST00000508282 DNAJC1Q96KC8 554 aaKnown RBP2.92□□□□□ -1.94
DHFR-204ENST00000508282 C20orf85Q9H1P6 137 aa2.92□□□□□ -1.94
DHFR-204ENST00000508282 CSNK1G1Q9HCP0 422 aa2.92□□□□□ -1.94
DHFR-204ENST00000508282 CALYQ9NYX4 217 aa2.92□□□□□ -1.94
DHFR-204ENST00000508282 ADA2Q9NZK5 511 aa2.92□□□□□ -1.94
DHFR-204ENST00000508282 CTSFQ9UBX1 484 aa2.92□□□□□ -1.94
DHFR-204ENST00000508282 ZNF282Q9UDV7 671 aaPredicted RBP2.92□□□□□ -1.94
DHFR-204ENST00000508282 KIF25Q9UIL4 384 aa2.92□□□□□ -1.94
DHFR-204ENST00000508282 BTNL2Q9UIR0 455 aa2.92□□□□□ -1.94
DHFR-204ENST00000508282 GNPTGQ9UJJ9 305 aa2.92□□□□□ -1.94
DHFR-204ENST00000508282 RCL1Q9Y2P8 373 aaKnown RBP2.92□□□□□ -1.94
DHFR-204ENST00000508282 RBMX2Q9Y388 322 aaKnown RBP2.92□□□□□ -1.94
DHFR-204ENST00000508282 UGT2A1Q9Y4X1 527 aa2.92□□□□□ -1.94
DHFR-204ENST00000508282 ADGRA3Q8IWK6 1321 aa2.92□□□□□ -1.94
DHFR-204ENST00000508282 AQRO60306 1485 aaKnown RBP eCLIP2.91□□□□□ -1.942e-19■■■□□ 14.9
DHFR-204ENST00000508282 ZNF816-ZNF321PA0A0X1KG74 233 aa2.91□□□□□ -1.94
DHFR-204ENST00000508282 SPRR5A0A1B0GTR4 108 aa2.91□□□□□ -1.94
DHFR-204ENST00000508282 A0A1W2PRF3 423 aa2.91□□□□□ -1.94
DHFR-204ENST00000508282 A0A1W2PRM7 423 aa2.91□□□□□ -1.94
DHFR-204ENST00000508282 A6NDX4 124 aa2.91□□□□□ -1.94
DHFR-204ENST00000508282 PLPP1O14494 284 aa2.91□□□□□ -1.94
DHFR-204ENST00000508282 E2F6O75461 281 aa2.91□□□□□ -1.94
DHFR-204ENST00000508282 SNAPINO95295 136 aa2.91□□□□□ -1.94
DHFR-204ENST00000508282 SMC2O95347 1197 aa2.91□□□□□ -1.94
DHFR-204ENST00000508282 DEKP35659 375 aaKnown RBP2.91□□□□□ -1.94
DHFR-204ENST00000508282 RFC3P40938 356 aa2.91□□□□□ -1.94
DHFR-204ENST00000508282 CSKP41240 450 aa2.91□□□□□ -1.94
DHFR-204ENST00000508282 GPR6P46095 362 aaPredicted RBP2.91□□□□□ -1.94
DHFR-204ENST00000508282 SUB1P53999 127 aaKnown RBP eCLIP2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms