RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 TIMP1P01033 207 aa15.39■□□□□ 0.05
SQSTM1-211ENST00000506690 ERCC1P07992 297 aaPredicted RBP15.39■□□□□ 0.05
SQSTM1-211ENST00000506690 SERPINF1P36955 418 aa15.39■□□□□ 0.05
SQSTM1-211ENST00000506690 CTXN1P60606 82 aa15.39■□□□□ 0.05
SQSTM1-211ENST00000506690 ITPRIPL2Q3MIP1 535 aa15.39■□□□□ 0.05
SQSTM1-211ENST00000506690 CDNFQ49AH0 187 aa15.39■□□□□ 0.05
SQSTM1-211ENST00000506690 LRRC69Q6ZNQ3 347 aa15.39■□□□□ 0.05
SQSTM1-211ENST00000506690 ADAD2Q8NCV1 583 aaKnown RBP15.39■□□□□ 0.05
SQSTM1-211ENST00000506690 TRIM43Q96BQ3 446 aaPredicted RBP15.39■□□□□ 0.05
SQSTM1-211ENST00000506690 ZNF775Q96BV0 537 aaPredicted RBP15.39■□□□□ 0.05
SQSTM1-211ENST00000506690 ZNF587Q96SQ5 575 aaPredicted RBP15.39■□□□□ 0.05
SQSTM1-211ENST00000506690 CDC6Q99741 560 aa15.39■□□□□ 0.05
SQSTM1-211ENST00000506690 KIR3DX1Q9H7L2 352 aa15.39■□□□□ 0.05
SQSTM1-211ENST00000506690 LOC100509620A0A075B734 347 aa15.39■□□□□ 0.05
SQSTM1-211ENST00000506690 GRXCR1A8MXD5 290 aa15.39■□□□□ 0.05
SQSTM1-211ENST00000506690 NPIPB9F8W1W9 429 aa15.39■□□□□ 0.05
SQSTM1-211ENST00000506690 H7C1C5 153 aa15.39■□□□□ 0.05
SQSTM1-211ENST00000506690 STK17BO94768 372 aa15.39■□□□□ 0.05
SQSTM1-211ENST00000506690 HTR3BO95264 441 aa15.39■□□□□ 0.05
SQSTM1-211ENST00000506690 IGHV2-5P01817 119 aa15.39■□□□□ 0.05
SQSTM1-211ENST00000506690 VAMP1P23763 118 aa15.39■□□□□ 0.05
SQSTM1-211ENST00000506690 GRK6P43250 576 aa15.39■□□□□ 0.05
SQSTM1-211ENST00000506690 CX3CR1P49238 355 aa15.39■□□□□ 0.05
SQSTM1-211ENST00000506690 LCN6P62502 163 aa15.39■□□□□ 0.05
SQSTM1-211ENST00000506690 ALG10Q5BKT4 473 aa15.39■□□□□ 0.05
SQSTM1-211ENST00000506690 TMEM244Q5VVB8 128 aa15.39■□□□□ 0.05
SQSTM1-211ENST00000506690 AWAT2Q6E213 333 aa15.39■□□□□ 0.05
SQSTM1-211ENST00000506690 OR10K2Q6IF99 312 aa15.39■□□□□ 0.05
SQSTM1-211ENST00000506690 LIPHQ8WWY8 451 aa15.39■□□□□ 0.05
SQSTM1-211ENST00000506690 AQP3Q92482 292 aa15.39■□□□□ 0.05
SQSTM1-211ENST00000506690 LRRC3BQ96PB8 259 aa15.39■□□□□ 0.05
SQSTM1-211ENST00000506690 MICU1Q9BPX6 476 aa15.39■□□□□ 0.05
SQSTM1-211ENST00000506690 PRMT8Q9NR22 394 aaPredicted RBP15.39■□□□□ 0.05
SQSTM1-211ENST00000506690 RPH3AQ9Y2J0 694 aaPredicted RBP15.39■□□□□ 0.05
SQSTM1-211ENST00000506690 WIF1Q9Y5W5 379 aa15.39■□□□□ 0.05
SQSTM1-211ENST00000506690 COLEC10Q9Y6Z7 277 aa15.39■□□□□ 0.05
SQSTM1-211ENST00000506690 C13orf42A0A1B0GVH6 325 aa15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 FITM1A5D6W6 292 aa15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 MFNGO00587 321 aa15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 CYR61O00622 381 aa15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 PHYHO14832 338 aa15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 MT-ND4LP03901 98 aa15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 FCGR3AP08637 254 aa15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 PRF1P14222 555 aa15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 IGFBP3P17936 291 aaPredicted RBP15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 MAOAP21397 527 aa15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 CYCSP99999 105 aaKnown RBP15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 ZNF74Q16587 644 aa15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 MESTQ5EB52 335 aa15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 ETV3LQ6ZN32 361 aa15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 TMPPEQ6ZT21 453 aa15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 NUBPLQ8TB37 319 aa15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 RNF128Q8TEB7 428 aa15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 FBXO17Q96EF6 278 aa15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 ZC3H10Q96K80 434 aaKnown RBP15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 INTS14Q96SY0 518 aa15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 LMF2Q9BU23 707 aaKnown RBP15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 SLC22A13Q9Y226 551 aa15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 TRBV23-1A0A0A0MS06 115 aa15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 URADA6NGE7 173 aa15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 FOXS1O43638 330 aa15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 CTSVO60911 334 aa15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 RHOP08100 348 aa15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 FBP1P09467 338 aa15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 FOSL1P15407 271 aa15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 PMELP40967 661 aa15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 EEF1A1P5Q5VTE0 462 aa15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 FBXO46Q6PJ61 603 aaPredicted RBP15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 DGAT2L6Q6ZPD8 337 aa15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 ETFBKMTQ8IXQ9 262 aa15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 OTOSQ8NHW6 89 aa15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 MOGAT1Q96PD6 335 aa15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 SYT4Q9H2B2 425 aa15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 ELOVL3Q9HB03 270 aa15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 CACFD1Q9UGQ2 172 aa15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 KCNG2Q9UJ96 466 aa15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 PILRAQ9UKJ1 303 aa15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 MRPS33Q9Y291 106 aaKnown RBP15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 TIMM10BQ9Y5J6 103 aa15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 CACNA1CQ13936 2221 aa15.38■□□□□ 0.05
SQSTM1-211ENST00000506690 WIPF3A6NGB9 483 aa15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 MSGN1A6NI15 193 aa15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 C9JQL5 133 aa15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 MBTPS2O43462 519 aa15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 NDUFS6O75380 124 aaKnown RBP15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 FGF19O95750 216 aa15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 CEACAM5P06731 702 aa15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 LYL1P12980 280 aa15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 ZNF10P21506 573 aaPredicted RBP15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 CPT2P23786 658 aa15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 STARD6P59095 220 aa15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 SLC17A1Q14916 467 aa15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 TEX30Q5JUR7 227 aa15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 ZNF585AQ6P3V2 769 aa15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 PRSS41Q7RTY9 318 aa15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 SFTPA1Q8IWL2 248 aa15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 ASB5Q8WWX0 329 aa15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 OR8B4Q96RC9 309 aa15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 NUDT9Q9BW91 350 aa15.37■□□□□ 0.05
SQSTM1-211ENST00000506690 FN3KRPQ9HA64 309 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms