RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 ZNF45Q02386 682 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 EGFEM1PQ0D2K5 195 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 ALKBH6Q3KRA9 238 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 FAM78AQ5JUQ0 283 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 SASS6Q6UVJ0 657 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 CLEC2AQ6UVW9 174 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 CD300LGQ6UXG3 332 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 TMIGD1Q6UXZ0 262 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 CCDC73Q6ZRK6 1079 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 OTUD6AQ7L8S5 288 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 SSX9Q7RTT3 188 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 CDC20BQ86Y33 519 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 RDH10Q8IZV5 341 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 COMMD1Q8N668 190 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 FAM184AQ8NB25 1140 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 OR10G3Q8NGC4 313 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 OR2AP1Q8NGE2 309 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 OR52I1Q8NGK6 324 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 SPATA3Q8NHX4 192 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 TCEAL3Q969E4 200 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 HSFY1Q96LI6 401 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 OR8B4Q96RC9 309 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 SORT1Q99523 831 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 SH3GL1Q99961 368 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 P2RY13Q9BPV8 354 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 BPIFA3Q9BQP9 254 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 EBF4Q9BQW3 602 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 NICN1Q9BSH3 213 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 NAT9Q9BTE0 207 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 FAIM2Q9BWQ8 316 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 TMEM59Q9BXS4 323 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 POLR2J2Q9GZM3 115 aaKnown RBP2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 POLR2J3Q9H1A7 115 aaKnown RBP2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 AUNIPQ9H7T9 357 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 GEMIN7Q9H840 131 aaKnown RBP2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 ZDHHC11Q9H8X9 412 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 CRLF2Q9HC73 371 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 MRPL47Q9HD33 250 aaKnown RBP2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 IL26Q9NPH9 171 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 INPP5EQ9NRR6 644 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 CD274Q9NZQ7 290 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 Q9UF83 564 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 ZNF107Q9UII5 783 aaPredicted RBP2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 KIF25Q9UIL4 384 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 VANGL2Q9ULK5 521 aa2.39□□□□□ -2.03
TRAPPC11-205ENST00000506426 LOXHD1Q8IVV2 1947 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 SMG1Q96Q15 3661 aaKnown RBP2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 A0A1B0GUA9 196 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 L7N2F9 121 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 CCL21O00585 134 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 DLGAP1O14490 977 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 GOSR2O14653 212 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 AIM2O14862 343 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 MGRN1O60291 552 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 OR2J3O76001 311 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 OR2F2O95006 317 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 IGHV2-5P01817 119 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 STAG3L3P0CL85 134 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 CXCL8P10145 99 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 TDGF1P13385 188 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 ZNF43P17038 809 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 PSMB1P20618 241 aaKnown RBP2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 CMA1P23946 247 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 CCNE1P24864 410 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 CXCR2P25025 360 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 U2AF2P26368 475 aaKnown RBP eCLIP2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 KRTAP5-9P26371 169 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 ATP5C1P36542 298 aaKnown RBP2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 PEX19P40855 299 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 TNFSF9P41273 254 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 RFX3P48380 749 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 KLK7P49862 253 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 RAB9AP51151 201 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 TGFBR3Q03167 851 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 TWF1Q12792 350 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 SF3A2Q15428 464 aaKnown RBP2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 ATP6AP1Q15904 470 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 KYAT1Q16773 422 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 EOGTQ5NDL2 527 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 SLC25A30Q5SVS4 291 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 KRTAP5-4Q6L8H1 288 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 TRIM40Q6P9F5 258 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 FAM220AQ7Z4H9 259 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 SCD5Q86SK9 330 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 ZBTB8OSQ8IWT0 167 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 PIANPQ8IYJ0 282 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 DAW1Q8N136 415 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 C6orf223Q8N319 242 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 GPD1LQ8N335 351 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 BPIFCQ8NFQ6 507 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 OR6C4Q8NGE1 309 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 OR51S1Q8NGJ8 323 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 OR2G2Q8NGZ5 317 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 MRAPQ8TCY5 172 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 SMARCD2Q92925 531 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 PEX13Q92968 403 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 CCDC126Q96EE4 140 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 ITCHQ96J02 903 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 ATP5SQ99766 215 aa2.38□□□□□ -2.03
TRAPPC11-205ENST00000506426 ARHGDIGQ99819 225 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms