RNA–Protein interactions for RNA: ENST00000505874.1

LINC00616-202, long intergenic non-protein coding RNA 616, humanhuman

TSL 3

Gene LINC00616, Length 260 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-202ENST00000505874 SLC17A5Q9NRA2 495 aa1.75□□□□□ -2.13
LINC00616-202ENST00000505874 AGPAT3Q9NRZ7 376 aa1.75□□□□□ -2.13
LINC00616-202ENST00000505874 GLRX2Q9NS18 164 aa1.75□□□□□ -2.13
LINC00616-202ENST00000505874 DMAC2Q9NW81 257 aa1.75□□□□□ -2.13
LINC00616-202ENST00000505874 COPS3Q9UNS2 423 aa1.75□□□□□ -2.13
LINC00616-202ENST00000505874 RASD1Q9Y272 281 aa1.75□□□□□ -2.13
LINC00616-202ENST00000505874 RPL36Q9Y3U8 105 aaKnown RBP1.75□□□□□ -2.13
LINC00616-202ENST00000505874 VWA8A3KMH1 1905 aa1.75□□□□□ -2.13
LINC00616-202ENST00000505874 ANAPC1Q9H1A4 1944 aa1.75□□□□□ -2.13
LINC00616-202ENST00000505874 NLRC5Q86WI3 1866 aa1.75□□□□□ -2.13
LINC00616-202ENST00000505874 TANC1Q9C0D5 1861 aa1.75□□□□□ -2.13
LINC00616-202ENST00000505874 PIKFYVEQ9Y2I7 2098 aa1.75□□□□□ -2.13
LINC00616-202ENST00000505874 BDP1A6H8Y1 2624 aa1.74□□□□□ -2.13
LINC00616-202ENST00000505874 MN1Q10571 1320 aaPredicted RBP1.74□□□□□ -2.13
LINC00616-202ENST00000505874 IGHV5-51A0A0C4DH38 117 aa1.74□□□□□ -2.13
LINC00616-202ENST00000505874 IGHV3-66A0A0C4DH42 116 aa1.74□□□□□ -2.13
LINC00616-202ENST00000505874 LOC110117498-PIK3R3F6TDL0 507 aa1.74□□□□□ -2.13
LINC00616-202ENST00000505874 INS-IGF2F8WCM5 200 aa1.74□□□□□ -2.13
LINC00616-202ENST00000505874 TNNC2P02585 160 aa1.74□□□□□ -2.13
LINC00616-202ENST00000505874 BGLAPP02818 100 aa1.74□□□□□ -2.13
LINC00616-202ENST00000505874 KCNE1P15382 129 aa1.74□□□□□ -2.13
LINC00616-202ENST00000505874 ARF4P18085 180 aaPredicted RBP1.74□□□□□ -2.13
LINC00616-202ENST00000505874 TNNI1P19237 187 aa1.74□□□□□ -2.13
LINC00616-202ENST00000505874 OMGP23515 440 aa1.74□□□□□ -2.13
LINC00616-202ENST00000505874 CASP1P29466 404 aa1.74□□□□□ -2.13
LINC00616-202ENST00000505874 FGF8P55075 233 aaPredicted RBP1.74□□□□□ -2.13
LINC00616-202ENST00000505874 ACVR1Q04771 509 aa1.74□□□□□ -2.13
LINC00616-202ENST00000505874 MGAT3Q09327 533 aa1.74□□□□□ -2.13
LINC00616-202ENST00000505874 SNRNP35Q16560 246 aaKnown RBP1.74□□□□□ -2.13
LINC00616-202ENST00000505874 EXOC3L4Q17RC7 722 aa1.74□□□□□ -2.13
LINC00616-202ENST00000505874 COA6Q5JTJ3 125 aaKnown RBP1.74□□□□□ -2.13
LINC00616-202ENST00000505874 SPECC1LQ69YQ0 1117 aa1.74□□□□□ -2.13
LINC00616-202ENST00000505874 PPP1R2P3Q6NXS1 205 aa1.74□□□□□ -2.13
LINC00616-202ENST00000505874 ALKAL1Q6UXT8 129 aa1.74□□□□□ -2.13
LINC00616-202ENST00000505874 ZNF546Q86UE3 836 aa1.74□□□□□ -2.13
LINC00616-202ENST00000505874 NELFCDQ8IXH7 590 aa1.74□□□□□ -2.13
LINC00616-202ENST00000505874 CLEC4FQ8N1N0 589 aa1.74□□□□□ -2.13
LINC00616-202ENST00000505874 CCDC112Q8NEF3 446 aa1.74□□□□□ -2.13
LINC00616-202ENST00000505874 MGARPQ8TDB4 240 aa1.74□□□□□ -2.13
LINC00616-202ENST00000505874 DNAJB3Q8WWF6 145 aa1.74□□□□□ -2.13
LINC00616-202ENST00000505874 RGP1Q92546 391 aaPredicted RBP1.74□□□□□ -2.13
LINC00616-202ENST00000505874 LRRC58Q96CX6 371 aa1.74□□□□□ -2.13
LINC00616-202ENST00000505874 MRPL38Q96DV4 380 aaKnown RBP1.74□□□□□ -2.13
LINC00616-202ENST00000505874 RBMXL1Q96E39 390 aaKnown RBP1.74□□□□□ -2.13
LINC00616-202ENST00000505874 ANKRD36BP1Q96IX9 119 aa1.74□□□□□ -2.13
LINC00616-202ENST00000505874 NIPSNAP3BQ9BS92 247 aa1.74□□□□□ -2.13
LINC00616-202ENST00000505874 SPXQ9BT56 116 aa1.74□□□□□ -2.13
LINC00616-202ENST00000505874 RIOK2Q9BVS4 552 aaKnown RBP1.74□□□□□ -2.13
LINC00616-202ENST00000505874 CCDC94Q9BW85 323 aaPredicted RBP1.74□□□□□ -2.13
LINC00616-202ENST00000505874 MRPL13Q9BYD1 178 aaKnown RBP1.74□□□□□ -2.13
LINC00616-202ENST00000505874 HSD3B7Q9H2F3 369 aa1.74□□□□□ -2.13
LINC00616-202ENST00000505874 C11orf49Q9H6J7 331 aa1.74□□□□□ -2.13
LINC00616-202ENST00000505874 CTPS2Q9NRF8 586 aa1.74□□□□□ -2.13
LINC00616-202ENST00000505874 RGS18Q9NS28 235 aa1.74□□□□□ -2.13
LINC00616-202ENST00000505874 SAMSN1Q9NSI8 373 aaKnown RBP1.74□□□□□ -2.13
LINC00616-202ENST00000505874 ZNHIT6Q9NWK9 470 aaKnown RBP1.74□□□□□ -2.13
LINC00616-202ENST00000505874 ZNF229Q9UJW7 825 aa1.74□□□□□ -2.13
LINC00616-202ENST00000505874 COQ4Q9Y3A0 265 aa1.74□□□□□ -2.13
LINC00616-202ENST00000505874 F11RQ9Y624 299 aaKnown RBP1.74□□□□□ -2.13
LINC00616-202ENST00000505874 BZW2Q9Y6E2 419 aaKnown RBP1.74□□□□□ -2.13
LINC00616-202ENST00000505874 LTBP2Q14767 1821 aa1.74□□□□□ -2.13
LINC00616-202ENST00000505874 CACNA1EQ15878 2313 aa1.74□□□□□ -2.13
LINC00616-202ENST00000505874 CNTRLQ7Z7A1 2325 aa1.74□□□□□ -2.13
LINC00616-202ENST00000505874 LAMA3Q16787 3333 aa1.74□□□□□ -2.13
LINC00616-202ENST00000505874 CHD5Q8TDI0 1954 aa1.74□□□□□ -2.13
LINC00616-202ENST00000505874 CHD7Q9P2D1 2997 aa1.74□□□□□ -2.13
LINC00616-202ENST00000505874 FAM186AA6NE01 2351 aa1.73□□□□□ -2.13
LINC00616-202ENST00000505874 GBF1Q92538 1859 aa1.73□□□□□ -2.13
LINC00616-202ENST00000505874 ADGRA3Q8IWK6 1321 aa1.73□□□□□ -2.13
LINC00616-202ENST00000505874 RP1L1Q8IWN7 2480 aaPredicted RBP1.73□□□□□ -2.13
LINC00616-202ENST00000505874 IGLV3-12A0A075B6K2 115 aa1.73□□□□□ -2.13
LINC00616-202ENST00000505874 A0A1B0GVX0 72 aa1.73□□□□□ -2.13
LINC00616-202ENST00000505874 A0A1W2PNV4 684 aa1.73□□□□□ -2.13
LINC00616-202ENST00000505874 LRRIQ3A6PVS8 624 aaPredicted RBP1.73□□□□□ -2.13
LINC00616-202ENST00000505874 NPIPA7E9PJI5 369 aa1.73□□□□□ -2.13
LINC00616-202ENST00000505874 K7EM74 188 aa1.73□□□□□ -2.13
LINC00616-202ENST00000505874 RBFOX2O43251 390 aaKnown RBP eCLIP1.73□□□□□ -2.13
LINC00616-202ENST00000505874 TRAPPC3O43617 180 aa1.73□□□□□ -2.13
LINC00616-202ENST00000505874 NEBLO76041 1014 aa1.73□□□□□ -2.13
LINC00616-202ENST00000505874 ASS1P00966 412 aaKnown RBP1.73□□□□□ -2.13
LINC00616-202ENST00000505874 IQCF3P0C7M6 154 aa1.73□□□□□ -2.13
LINC00616-202ENST00000505874 ZDHHC11BP0C7U3 371 aa1.73□□□□□ -2.13
LINC00616-202ENST00000505874 LINC00869P0C866 280 aa1.73□□□□□ -2.13
LINC00616-202ENST00000505874 NPIPA8P0DM63 369 aa1.73□□□□□ -2.13
LINC00616-202ENST00000505874 TNNI3P19429 210 aa1.73□□□□□ -2.13
LINC00616-202ENST00000505874 PCMT1P22061 227 aa1.73□□□□□ -2.13
LINC00616-202ENST00000505874 HNRNPH3P31942 346 aaKnown RBP1.73□□□□□ -2.13
LINC00616-202ENST00000505874 CASP4P49662 377 aa1.73□□□□□ -2.13
LINC00616-202ENST00000505874 YWHAEP62258 255 aaKnown RBP1.73□□□□□ -2.13
LINC00616-202ENST00000505874 RAP1AP62834 184 aa1.73□□□□□ -2.13
LINC00616-202ENST00000505874 CYP24A1Q07973 514 aa1.73□□□□□ -2.13
LINC00616-202ENST00000505874 FZD2Q14332 565 aa1.73□□□□□ -2.13
LINC00616-202ENST00000505874 ZBTB6Q15916 424 aa1.73□□□□□ -2.13
LINC00616-202ENST00000505874 ZBED5Q49AG3 693 aa1.73□□□□□ -2.13
LINC00616-202ENST00000505874 GGTA1PQ4G0N0 100 aa1.73□□□□□ -2.13
LINC00616-202ENST00000505874 VAX1Q5SQQ9 334 aa1.73□□□□□ -2.13
LINC00616-202ENST00000505874 ZNF684Q5T5D7 378 aa1.73□□□□□ -2.13
LINC00616-202ENST00000505874 TWF2Q6IBS0 349 aaKnown RBP1.73□□□□□ -2.13
LINC00616-202ENST00000505874 OR52E8Q6IFG1 317 aa1.73□□□□□ -2.13
LINC00616-202ENST00000505874 KCNIP4Q6PIL6 250 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms