RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 COPS3Q9UNS2 423 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 MOKQ9UQ07 419 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 EXOGQ9Y2C4 368 aaKnown RBP4.29□□□□□ -1.72
LMNB1-208ENST00000504788 LRRC42Q9Y546 428 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 HSPE1-MOB4S4R3N1 261 aa4.29□□□□□ -1.72
LMNB1-208ENST00000504788 FLNBO75369 2602 aaKnown RBP4.29□□□□□ -1.72
LMNB1-208ENST00000504788 CACNA1DQ01668 2161 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 SH3D21A4FU49 640 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 C5orf63A6NC05 138 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 TVP23AA6NH52 213 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 RER1O15258 196 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 ABHD16AO95870 558 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 RENP00797 406 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 IFNGP01579 166 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 IGHA1P01876 353 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 HTR1AP08908 422 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 CECR9P0C854 216 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 OR8G3PP0DMU2 310 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 DBTP11182 482 aaKnown RBP4.28□□□□□ -1.72
LMNB1-208ENST00000504788 NR2C1P13056 603 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 PRF1P14222 555 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 CBR1P16152 277 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 PPP3CBP16298 524 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 CDH2P19022 906 aaPredicted RBP4.28□□□□□ -1.72
LMNB1-208ENST00000504788 NPR2P20594 1047 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 HTR1FP30939 366 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 CALCRP30988 508 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 HCCSP53701 268 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 RAB1AP62820 205 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 NKX6-1P78426 367 aaPredicted RBP4.28□□□□□ -1.72
LMNB1-208ENST00000504788 ZNF91Q05481 1191 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 SPOCK1Q08629 439 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 APOFQ13790 326 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 NCMAPQ5T1S8 102 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 TTC23Q5W5X9 447 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 HIST2H2BCQ6DN03 193 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 CORO6Q6QEF8 472 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 RHOUQ7L0Q8 258 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 MEPCEQ7L2J0 689 aaKnown RBP4.28□□□□□ -1.72
LMNB1-208ENST00000504788 VASH1Q7L8A9 365 aaPredicted RBP4.28□□□□□ -1.72
LMNB1-208ENST00000504788 DPY19L4Q7Z388 723 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 ABHD12BQ7Z5M8 362 aaPredicted RBP4.28□□□□□ -1.72
LMNB1-208ENST00000504788 MDP1Q86V88 176 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 LRRC18Q8N456 261 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 OR52N5Q8NH56 324 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 OTOSQ8NHW6 89 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 RNF133Q8WVZ7 376 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 CYGBQ8WWM9 190 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 HSD17B8Q92506 261 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 SGCDQ92629 289 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 ZMYND19Q96E35 227 aaPredicted RBP4.28□□□□□ -1.72
LMNB1-208ENST00000504788 ZNF184Q99676 751 aaPredicted RBP4.28□□□□□ -1.72
LMNB1-208ENST00000504788 USB1Q9BQ65 265 aaKnown RBP4.28□□□□□ -1.72
LMNB1-208ENST00000504788 WACQ9BTA9 647 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 JAM3Q9BX67 310 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 OR2H1Q9GZK4 316 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 RASSF4Q9H2L5 321 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 DUSP21Q9H596 190 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 RASSF1Q9NS23 344 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 DNAJC27Q9NZQ0 273 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 ASH2LQ9UBL3 628 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 KCNG2Q9UJ96 466 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 RAB26Q9ULW5 256 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 MYRFQ9Y2G1 1151 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 GMPPBQ9Y5P6 360 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 CELSR1Q9NYQ6 3014 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 SVEP1Q4LDE5 3571 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.28□□□□□ -1.72
LMNB1-208ENST00000504788 A1L4Q6 167 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 TUBAL3A6NHL2 446 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 SHISA9B4DS77 424 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 CTAG2O75638 210 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 PLAUP00749 431 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 IGLV3-1P01715 115 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 SERPINA5P05154 406 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 LIMS3P0CW19 117 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 LIMS4P0CW20 117 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 COX5BP10606 129 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 OPRL1P41146 370 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 WNT5AP41221 380 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 CENPAP49450 140 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 ZNF84P51523 738 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 NUDT6P53370 316 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 CDC42P60953 191 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 CXCR4P61073 352 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 SLC35A2P78381 396 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 TGFBR3Q03167 851 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 ROM1Q03395 351 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 ZNF85Q03923 595 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 PIGFQ07326 219 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 TMED1Q13445 227 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 AQP6Q13520 282 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 PPA1Q15181 289 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 GSG1Q2KHT4 349 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 PABPC1L2AQ5JQF8 200 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 MEDAGQ5VYS4 303 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 SP5Q6BEB4 398 aaPredicted RBP4.28□□□□□ -1.72
LMNB1-208ENST00000504788 ZNF774Q6NX45 483 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 JAZF1Q86VZ6 243 aa4.28□□□□□ -1.72
LMNB1-208ENST00000504788 LINC00346Q8IVM7 164 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms