RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 ZNF488Q96MN9 340 aa2.08□□□□□ -2.08
SUB1-204ENST00000504016 RNF157Q96PX1 679 aa2.08□□□□□ -2.08
SUB1-204ENST00000504016 DDX19AQ9NUU7 478 aaKnown RBP2.08□□□□□ -2.08
SUB1-204ENST00000504016 TUBGCP6Q96RT7 1819 aa2.07□□□□□ -2.08
SUB1-204ENST00000504016 PCM1Q15154 2024 aa2.07□□□□□ -2.08
SUB1-204ENST00000504016 FAM240BA0A1B0GVZ2 78 aa2.07□□□□□ -2.08
SUB1-204ENST00000504016 ZNF233A6NK53 670 aa2.07□□□□□ -2.08
SUB1-204ENST00000504016 CXCL11O14625 94 aa2.07□□□□□ -2.08
SUB1-204ENST00000504016 RAB29O14966 203 aa2.07□□□□□ -2.08
SUB1-204ENST00000504016 NUPL2O15504 423 aaKnown RBP2.07□□□□□ -2.08
SUB1-204ENST00000504016 CDRT1O95170 752 aa2.07□□□□□ -2.08
SUB1-204ENST00000504016 TSPAN13O95857 204 aa2.07□□□□□ -2.08
SUB1-204ENST00000504016 CRYGBP07316 175 aa2.07□□□□□ -2.08
SUB1-204ENST00000504016 C1GALT1C1LP0DN25 315 aa2.07□□□□□ -2.08
SUB1-204ENST00000504016 RNASE2P10153 161 aaKnown RBP2.07□□□□□ -2.08
SUB1-204ENST00000504016 CCNB1P14635 433 aa2.07□□□□□ -2.08
SUB1-204ENST00000504016 NSG1P42857 185 aa2.07□□□□□ -2.08
SUB1-204ENST00000504016 TMED10P49755 219 aaKnown RBP2.07□□□□□ -2.08
SUB1-204ENST00000504016 SSR4P51571 173 aa2.07□□□□□ -2.08
SUB1-204ENST00000504016 CDKN2DP55273 166 aa2.07□□□□□ -2.08
SUB1-204ENST00000504016 ZNF816Q0VGE8 651 aaPredicted RBP2.07□□□□□ -2.08
SUB1-204ENST00000504016 IRF4Q15306 451 aa2.07□□□□□ -2.08
SUB1-204ENST00000504016 SF3A2Q15428 464 aaKnown RBP2.07□□□□□ -2.08
SUB1-204ENST00000504016 VPS26BQ4G0F5 336 aa2.07□□□□□ -2.08
SUB1-204ENST00000504016 SOHLH1Q5JUK2 328 aa2.07□□□□□ -2.08
SUB1-204ENST00000504016 LINC01560Q8TB33 94 aa2.07□□□□□ -2.08
SUB1-204ENST00000504016 SHC3Q92529 594 aa2.07□□□□□ -2.08
SUB1-204ENST00000504016 NT5C3BQ969T7 300 aa2.07□□□□□ -2.08
SUB1-204ENST00000504016 PARP12Q9H0J9 701 aaKnown RBP2.07□□□□□ -2.08
SUB1-204ENST00000504016 METTL7AQ9H8H3 244 aa2.07□□□□□ -2.08
SUB1-204ENST00000504016 TMEM9BQ9NQ34 198 aa2.07□□□□□ -2.08
SUB1-204ENST00000504016 PSMC3IPQ9P2W1 217 aaPredicted RBP2.07□□□□□ -2.08
SUB1-204ENST00000504016 STARD10Q9Y365 291 aa2.07□□□□□ -2.08
SUB1-204ENST00000504016 KANK1Q14678 1352 aa2.07□□□□□ -2.08
SUB1-204ENST00000504016 LRRIQ3A6PVS8 624 aaPredicted RBP2.06□□□□□ -2.08
SUB1-204ENST00000504016 MRPS12O15235 138 aaKnown RBP2.06□□□□□ -2.08
SUB1-204ENST00000504016 YIF1AO95070 293 aa2.06□□□□□ -2.08
SUB1-204ENST00000504016 IGHDP01880 384 aa2.06□□□□□ -2.08
SUB1-204ENST00000504016 HLA-DQA1P01909 254 aa2.06□□□□□ -2.08
SUB1-204ENST00000504016 CD3GP09693 182 aa2.06□□□□□ -2.08
SUB1-204ENST00000504016 ACSM4P0C7M7 580 aa2.06□□□□□ -2.08
SUB1-204ENST00000504016 OR8U9P0C7N5 309 aa2.06□□□□□ -2.08
SUB1-204ENST00000504016 PABPC4LP0CB38 370 aaKnown RBP2.06□□□□□ -2.08
SUB1-204ENST00000504016 GGT1P19440 569 aa2.06□□□□□ -2.08
SUB1-204ENST00000504016 CSNK1EP49674 416 aaKnown RBP2.06□□□□□ -2.08
SUB1-204ENST00000504016 RPL23AP62750 156 aaKnown RBP2.06□□□□□ -2.08
SUB1-204ENST00000504016 PPM1LQ5SGD2 360 aa2.06□□□□□ -2.08
SUB1-204ENST00000504016 SASS6Q6UVJ0 657 aa2.06□□□□□ -2.08
SUB1-204ENST00000504016 Q6ZSR3 168 aa2.06□□□□□ -2.08
SUB1-204ENST00000504016 PRELID2Q8N945 189 aa2.06□□□□□ -2.08
SUB1-204ENST00000504016 FBXL13Q8NEE6 735 aa2.06□□□□□ -2.08
SUB1-204ENST00000504016 SPATA4Q8NEY3 305 aa2.06□□□□□ -2.08
SUB1-204ENST00000504016 OR9K2Q8NGE7 335 aa2.06□□□□□ -2.08
SUB1-204ENST00000504016 N4BP2L2Q92802 583 aaPredicted RBP2.06□□□□□ -2.08
SUB1-204ENST00000504016 NTAN1Q96AB6 310 aa2.06□□□□□ -2.08
SUB1-204ENST00000504016 DUS3LQ96G46 650 aaKnown RBP2.06□□□□□ -2.08
SUB1-204ENST00000504016 OSBPL11Q9BXB4 747 aa2.06□□□□□ -2.08
SUB1-204ENST00000504016 NT5C3AQ9H0P0 336 aa2.06□□□□□ -2.08
SUB1-204ENST00000504016 OR52D1Q9H346 318 aa2.06□□□□□ -2.08
SUB1-204ENST00000504016 ETNK2Q9NVF9 386 aa2.06□□□□□ -2.08
SUB1-204ENST00000504016 SLC2A8Q9NY64 477 aa2.06□□□□□ -2.08
SUB1-204ENST00000504016 CABIN1Q9Y6J0 2220 aa2.05□□□□□ -2.08
SUB1-204ENST00000504016 IGLV1-36A0A0B4J1U3 117 aa2.05□□□□□ -2.08
SUB1-204ENST00000504016 A0A0U1RQV1 116 aa2.05□□□□□ -2.08
SUB1-204ENST00000504016 OR6C74A6NCV1 312 aa2.05□□□□□ -2.08
SUB1-204ENST00000504016 A8MUU9 505 aa2.05□□□□□ -2.08
SUB1-204ENST00000504016 UBXN8O00124 270 aa2.05□□□□□ -2.08
SUB1-204ENST00000504016 AIM2O14862 343 aa2.05□□□□□ -2.08
SUB1-204ENST00000504016 HLA-DQB1P01920 261 aa2.05□□□□□ -2.08
SUB1-204ENST00000504016 IGKV4-1P06312 121 aa2.05□□□□□ -2.08
SUB1-204ENST00000504016 ZNF43P17038 809 aa2.05□□□□□ -2.08
SUB1-204ENST00000504016 F2RP25116 425 aa2.05□□□□□ -2.08
SUB1-204ENST00000504016 DCKP27707 260 aa2.05□□□□□ -2.08
SUB1-204ENST00000504016 GPX4P36969 197 aaPredicted RBP2.05□□□□□ -2.08
SUB1-204ENST00000504016 CXCL12P48061 93 aa2.05□□□□□ -2.08
SUB1-204ENST00000504016 VSX2P58304 361 aaPredicted RBP2.05□□□□□ -2.08
SUB1-204ENST00000504016 TGM3Q08188 693 aa2.05□□□□□ -2.08
SUB1-204ENST00000504016 LRRC74AQ0VAA2 488 aa2.05□□□□□ -2.08
SUB1-204ENST00000504016 C12orf54Q6X4T0 127 aa2.05□□□□□ -2.08
SUB1-204ENST00000504016 SNX20Q7Z614 316 aa2.05□□□□□ -2.08
SUB1-204ENST00000504016 LRRC52Q8N7C0 313 aa2.05□□□□□ -2.08
SUB1-204ENST00000504016 NECAB1Q8N987 351 aa2.05□□□□□ -2.08
SUB1-204ENST00000504016 OR10AD1Q8NGE0 317 aa2.05□□□□□ -2.08
SUB1-204ENST00000504016 LILRB4Q8NHJ6 448 aa2.05□□□□□ -2.08
SUB1-204ENST00000504016 KCNG3Q8TAE7 436 aa2.05□□□□□ -2.08
SUB1-204ENST00000504016 MRGPRFQ96AM1 343 aa2.05□□□□□ -2.08
SUB1-204ENST00000504016 EEF1AKMT3Q96AZ1 226 aa2.05□□□□□ -2.08
SUB1-204ENST00000504016 COX16Q9P0S2 106 aa2.05□□□□□ -2.08
SUB1-204ENST00000504016 EXTL2Q9UBQ6 330 aa2.05□□□□□ -2.08
SUB1-204ENST00000504016 HYOU1Q9Y4L1 999 aa2.05□□□□□ -2.08
SUB1-204ENST00000504016 ASB3Q9Y575 518 aa2.05□□□□□ -2.08
SUB1-204ENST00000504016 MAPK8IP3Q9UPT6 1336 aa2.05□□□□□ -2.08
SUB1-204ENST00000504016 ATAD2BQ9ULI0 1458 aa2.05□□□□□ -2.08
SUB1-204ENST00000504016 TRIM64CA6NLI5 447 aa2.04□□□□□ -2.08
SUB1-204ENST00000504016 LGALS9O00182 355 aa2.04□□□□□ -2.08
SUB1-204ENST00000504016 SLC2A3P11169 496 aa2.04□□□□□ -2.08
SUB1-204ENST00000504016 ZNF24P17028 368 aa2.04□□□□□ -2.08
SUB1-204ENST00000504016 WARSP23381 471 aaKnown RBP2.04□□□□□ -2.08
SUB1-204ENST00000504016 NAA10P41227 235 aaPredicted RBP2.04□□□□□ -2.08
SUB1-204ENST00000504016 HCAR3P49019 387 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms