RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 GDF2Q9UK05 429 aaPredicted RBP6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 NOSIPQ9Y314 301 aaKnown RBP6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 LRP12Q9Y561 859 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 FAM215AQ9Y5M1 114 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 TMEM14AQ9Y6G1 99 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 TLN1Q9Y490 2541 aaKnown RBP6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 PIEZO2Q9H5I5 2752 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 ZGRF1Q86YA3 2104 aa6.07□□□□□ -1.44
TOPBP1-203ENST00000503464 TRDV1A0A1B0GX56 115 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 C5orf63A6NC05 138 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 OR14I1A6ND48 311 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 ZNF503-AS2A6NEH8 195 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 CD8B2A6NJW9 211 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 RPL36A-HNRNPH2H7BZ11 118 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 RER1O15258 196 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 TOXO94900 526 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 ZFPL1O95159 310 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 CRYABP02511 175 aaKnown RBP6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 KRT8P05787 483 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 CD1AP06126 327 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 CLEC2LP0C7M8 214 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 CD8BP10966 210 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 NR2C1P13056 603 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 B4GALT1P15291 398 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 ZNF823P16415 610 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 CD53P19397 219 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 MSR1P21757 451 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 PSMA1P25786 263 aaKnown RBP6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 FGF9P31371 208 aaPredicted RBP6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 UGT2B10P36537 528 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 MAGEB1P43366 347 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 CAPZA2P47755 286 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 GDI2P50395 445 aaKnown RBP6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 GBX2P52951 348 aaPredicted RBP6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 TAS2R43P59537 309 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 LSM6P62312 80 aaKnown RBP6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 ROR2Q01974 943 aaKnown RBP6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 SLC3A1Q07837 685 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 FOXF2Q12947 444 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 LSAMPQ13449 338 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 SGCAQ16586 387 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 RSPO1Q2MKA7 263 aaPredicted RBP6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 CCDC58Q4VC31 144 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 CCDC92Q53HC0 331 aaPredicted RBP6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 FAM27BQ5VT28 67 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 C22orf42Q6IC83 251 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 RPL22L1Q6P5R6 122 aaKnown RBP6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 KCTD20Q7Z5Y7 419 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 EGFL6Q8IUX8 553 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 GCNT2Q8N0V5 402 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 GPR137CQ8N3F9 429 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 CISD2Q8N5K1 135 aaKnown RBP6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 YIPF7Q8N8F6 280 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 OR2G2Q8NGZ5 317 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 OR10AC1Q8NH08 325 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 FGFBP3Q8TAT2 258 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 GHSRQ92847 366 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 SLAMF6Q96DU3 332 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 GMPPAQ96IJ6 420 aaPredicted RBP6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 DACH2Q96NX9 599 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 TRIB1Q96RU8 372 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 RBM24Q9BX46 236 aaKnown RBP6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 HDHD5Q9BXW7 423 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 PRRG4Q9BZD6 226 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 BARHL1Q9BZE3 327 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 SLIRPQ9GZT3 109 aaKnown RBP6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 DCSTAMPQ9H295 470 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 GP6Q9HCN6 339 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 G6PC2Q9NQR9 355 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 DDX28Q9NUL7 540 aaKnown RBP6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 FAM206AQ9NX38 181 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 TUBD1Q9UJT1 453 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 IKZF2Q9UKS7 526 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 PRRC2CQ9Y520 2896 aaKnown RBP6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 RTTNQ86VV8 2226 aa6.06□□□□□ -1.44
TOPBP1-203ENST00000503464 TRBV2A0A0J9YWF9 115 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 MBD3L4A6NDZ8 208 aaPredicted RBP6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 MBD3L3A6NE82 208 aaPredicted RBP6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 MBD3L5A6NJ08 208 aaPredicted RBP6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 HSPB2A8KAH6 182 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 E9PLN8 166 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 PIN1P1O15428 100 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 NOL3O60936 208 aaKnown RBP6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 MRPL33O75394 65 aaKnown RBP6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 RGS9O75916 674 aaPredicted RBP6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 IL18BPO95998 194 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 ITGA5P08648 1049 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 MMP7P09237 267 aaPredicted RBP6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 PATE4P0C8F1 98 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 FCGR2AP12318 317 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 GALP22466 123 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 RPS19P39019 145 aaKnown RBP6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 KIR2DL2P43627 348 aaPredicted RBP6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 OR3A2P47893 321 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 SERPINB10P48595 397 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 ARF1P84077 181 aaKnown RBP6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 HGFACQ04756 655 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 ALKBH1Q13686 389 aaKnown RBP6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 HSPB2Q16082 182 aa6.05□□□□□ -1.44
TOPBP1-203ENST00000503464 KRTAP27-1Q3LI81 207 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms