RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 SIX6O95475 246 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 ZNF823P16415 610 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 H2BFSP57053 126 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 OC90Q02509 493 aaPredicted RBP8.82□□□□□ -1
CLIP1-204ENST00000501271 SPOCK1Q08629 439 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 OPCMLQ14982 345 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 CLLU1Q5K131 121 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 GLT8D1Q68CQ7 371 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 RHBDD2Q6NTF9 364 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 CORO6Q6QEF8 472 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 CCDC28AQ8IWP9 274 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 ZNF248Q8NDW4 579 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 ST8SIA1Q92185 356 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 SLC7A5P2Q9GIP4 190 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 TGIF2Q9GZN2 237 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 GLTPQ9NZD2 209 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 MYEF2Q9P2K5 600 aaKnown RBP8.82□□□□□ -1
CLIP1-204ENST00000501271 OR52A1Q9UKL2 312 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 HHLA2Q9UM44 414 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 ARPC4-TTLL3A0A0A6YYG9 625 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 A6NIZ1 184 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 TMEM200CA6NKL6 621 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 CRYZL1O95825 349 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 AFF3P51826 1226 aaKnown RBP8.81□□□□□ -1
CLIP1-204ENST00000501271 RAP1BP61224 184 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 RAP1AP62834 184 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 C17orf67Q0P5P2 114 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 ZP4Q12836 540 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 PCK2Q16822 640 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 OR10K2Q6IF99 312 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 STEAP1BQ6NZ63 245 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 LRFN4Q6PJG9 635 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 ZNF574Q6ZN55 896 aaPredicted RBP8.81□□□□□ -1
CLIP1-204ENST00000501271 H1FNTQ75WM6 255 aaPredicted RBP8.81□□□□□ -1
CLIP1-204ENST00000501271 ZNF627Q7L945 461 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 MUC20Q8N307 709 aaPredicted RBP8.81□□□□□ -1
CLIP1-204ENST00000501271 OR6M1Q8NGM8 313 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 MFSD8Q8NHS3 518 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 SEH1LQ96EE3 360 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 CHST6Q9GZX3 395 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 OPN4Q9UHM6 478 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 CACNA1EQ15878 2313 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 IGLV3-12A0A075B6K2 115 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 TMEM269A0A1B0GVZ9 245 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 UBE2QL1A1L167 161 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 H3BML4 177 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 EIF1AYO14602 144 aaKnown RBP8.81□□□□□ -1
CLIP1-204ENST00000501271 ISG15P05161 165 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 CD37P11049 281 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 ACHEP22303 614 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 DNASE1L1P49184 302 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 ARRB1P49407 418 aaPredicted RBP8.81□□□□□ -1
CLIP1-204ENST00000501271 DAP3P51398 398 aaKnown RBP8.81□□□□□ -1
CLIP1-204ENST00000501271 HSF1Q00613 529 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 TLE3Q04726 772 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 TOMM20Q15388 145 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 SHBQ15464 509 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 MOGAT2Q3SYC2 334 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 DCAF12L2Q5VW00 463 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 FAM198BQ6UWH4 519 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 ADGRE4PQ86SQ3 457 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 COMMD7Q86VX2 200 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 GABRG1Q8N1C3 465 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 JAGN1Q8N5M9 183 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 OR6S1Q8NH40 331 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 DNASE2BQ8WZ79 361 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 CMKLR1Q99788 373 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 UBE2ZQ9H832 354 aaPredicted RBP8.81□□□□□ -1
CLIP1-204ENST00000501271 ZMAT3Q9HA38 289 aaKnown RBP8.81□□□□□ -1
CLIP1-204ENST00000501271 APMAPQ9HDC9 416 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 CHST11Q9NPF2 352 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 SRPK3Q9UPE1 567 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 RHBDD3Q9Y3P4 386 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 MAB21L2Q9Y586 359 aa8.81□□□□□ -1
CLIP1-204ENST00000501271 VPS13AQ96RL7 3174 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 TRBV11-1A0A0K0K1C0 115 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 L7N2F9 121 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 P2RY10O00398 339 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 GOSR2O14653 212 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 LDLRAD4O15165 306 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 EFNA2O43921 213 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 RGS11O94810 467 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 LPLP06858 475 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 HEXBP07686 556 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 ZNF35P13682 527 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 GABRA1P14867 456 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 FOSL2P15408 326 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 NFYAP23511 347 aaPredicted RBP8.8□□□□□ -1
CLIP1-204ENST00000501271 APOBEC1P41238 236 aaKnown RBP8.8□□□□□ -1
CLIP1-204ENST00000501271 DLX5P56178 289 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 ACTBP60709 375 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 ACTG1P63261 375 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 DNM1P34Q6PK57 102 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 LYPD6Q86Y78 171 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 GALNT16Q8N428 558 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 OR2AK2Q8NG84 335 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 OR4D6Q8NGJ1 314 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 C17orf50Q8WW18 174 aa8.8□□□□□ -1
CLIP1-204ENST00000501271 PNPLA2Q96AD5 504 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms