RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 IPCEF1Q8WWN9 437 aaPredicted RBP7.23□□□□□ -1.25
HMGXB4-207ENST00000498212 TMEM158Q8WZ71 300 aa7.23□□□□□ -1.25
HMGXB4-207ENST00000498212 GTF3AQ92664 365 aaKnown RBP7.23□□□□□ -1.25
HMGXB4-207ENST00000498212 MCUR1Q96AQ8 359 aa7.23□□□□□ -1.25
HMGXB4-207ENST00000498212 C1orf159Q96HA4 380 aa7.23□□□□□ -1.25
HMGXB4-207ENST00000498212 PYURFQ96I23 114 aa7.23□□□□□ -1.25
HMGXB4-207ENST00000498212 C4orf45Q96LM5 186 aa7.23□□□□□ -1.25
HMGXB4-207ENST00000498212 NSMCE2Q96MF7 247 aa7.23□□□□□ -1.25
HMGXB4-207ENST00000498212 LRRC37BQ96QE4 947 aa7.23□□□□□ -1.25
HMGXB4-207ENST00000498212 OR2J1Q9GZK6 312 aa7.23□□□□□ -1.25
HMGXB4-207ENST00000498212 RERGLQ9H628 205 aa7.23□□□□□ -1.25
HMGXB4-207ENST00000498212 SAP30LQ9HAJ7 183 aa7.23□□□□□ -1.25
HMGXB4-207ENST00000498212 EMC7Q9NPA0 242 aa7.23□□□□□ -1.25
HMGXB4-207ENST00000498212 DECR2Q9NUI1 292 aa7.23□□□□□ -1.25
HMGXB4-207ENST00000498212 ARL8BQ9NVJ2 186 aa7.23□□□□□ -1.25
HMGXB4-207ENST00000498212 NDE1Q9NXR1 346 aa7.23□□□□□ -1.25
HMGXB4-207ENST00000498212 CD300AQ9UGN4 299 aa7.23□□□□□ -1.25
HMGXB4-207ENST00000498212 IL20RAQ9UHF4 553 aa7.23□□□□□ -1.25
HMGXB4-207ENST00000498212 NDRG4Q9ULP0 352 aaKnown RBP7.23□□□□□ -1.25
HMGXB4-207ENST00000498212 ARL2BPQ9Y2Y0 163 aa7.23□□□□□ -1.25
HMGXB4-207ENST00000498212 IER3IP1Q9Y5U9 82 aa7.23□□□□□ -1.25
HMGXB4-207ENST00000498212 B4DSR2 109 aa7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 H3BSA7 217 aa7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 SOCS2O14508 198 aa7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 ARPC2O15144 300 aa7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 PHF1O43189 567 aaPredicted RBP7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 SGCEO43556 437 aa7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 SPRY3O43610 288 aa7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 CDC14BO60729 498 aa7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 KHDRBS3O75525 346 aaKnown RBP7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 ABHD16AO95870 558 aa7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 TXNDC12O95881 172 aa7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 NGFP01138 241 aa7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 IGHV1-46P01743 117 aa7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 TFP02787 698 aa7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 FABP3P05413 133 aa7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 PCMT1P22061 227 aa7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 THBS2P35442 1172 aa7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 MSX2P35548 267 aaPredicted RBP7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 LIPAP38571 399 aa7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 CRYBB2P43320 205 aa7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 HTR5AP47898 357 aa7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 MMP15P51511 669 aa7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 DVL1P1P54792 670 aaPredicted RBP7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 TSTQ16762 297 aaKnown RBP7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 TMEM255AQ5JRV8 349 aa7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 FAM209AQ5JX71 171 aa7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 SMARCD3Q6STE5 483 aa7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 DPY19L2P2Q6ZN68 376 aa7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 PTCHD4Q6ZW05 846 aa7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 USP51Q70EK9 711 aa7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 PIGWQ7Z7B1 504 aa7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 ADCK1Q86TW2 530 aa7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 GLCCI1Q86VQ1 547 aa7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 DEFB107AQ8IZN7 70 aa7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 FANK1Q8TC84 345 aa7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 CDRT15Q96T59 188 aa7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 FUZQ9BT04 418 aa7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 RACGAP1Q9H0H5 632 aa7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 SYT4Q9H2B2 425 aa7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 CYSLTR2Q9NS75 346 aa7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 PLEK2Q9NYT0 353 aa7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 VSX1Q9NZR4 365 aaPredicted RBP7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 CGGBP1Q9UFW8 167 aaPredicted RBP7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 TMEFF2Q9UIK5 374 aaPredicted RBP7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 COA3Q9Y2R0 106 aaPredicted RBP7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 JMJD1CQ15652 2540 aa7.22□□□□□ -1.25
HMGXB4-207ENST00000498212 FAM157AC9JC47 383 aa7.21□□□□□ -1.26
HMGXB4-207ENST00000498212 CLDN25C9JDP6 229 aa7.21□□□□□ -1.26
HMGXB4-207ENST00000498212 IMPA2O14732 288 aa7.21□□□□□ -1.26
HMGXB4-207ENST00000498212 WNT9BO14905 357 aa7.21□□□□□ -1.26
HMGXB4-207ENST00000498212 TIMM8AO60220 97 aaPredicted RBP7.21□□□□□ -1.26
HMGXB4-207ENST00000498212 OR10H3O60404 316 aa7.21□□□□□ -1.26
HMGXB4-207ENST00000498212 MPZL1O95297 269 aa7.21□□□□□ -1.26
HMGXB4-207ENST00000498212 PPP1R3DO95685 299 aa7.21□□□□□ -1.26
HMGXB4-207ENST00000498212 MSMBP08118 114 aa7.21□□□□□ -1.26
HMGXB4-207ENST00000498212 GAAP10253 952 aa7.21□□□□□ -1.26
HMGXB4-207ENST00000498212 GSTM3P21266 225 aa7.21□□□□□ -1.26
HMGXB4-207ENST00000498212 CRABP1P29762 137 aa7.21□□□□□ -1.26
HMGXB4-207ENST00000498212 RRM2P31350 389 aa7.21□□□□□ -1.26
HMGXB4-207ENST00000498212 SLC6A6P31641 620 aa7.21□□□□□ -1.26
HMGXB4-207ENST00000498212 CDKN2AP42771 156 aaKnown RBP7.21□□□□□ -1.26
HMGXB4-207ENST00000498212 LSM6P62312 80 aaKnown RBP7.21□□□□□ -1.26
HMGXB4-207ENST00000498212 MVKQ03426 396 aa7.21□□□□□ -1.26
HMGXB4-207ENST00000498212 HFEQ30201 348 aa7.21□□□□□ -1.26
HMGXB4-207ENST00000498212 SPATS1Q496A3 300 aa7.21□□□□□ -1.26
HMGXB4-207ENST00000498212 ZMAT1Q5H9K5 638 aa7.21□□□□□ -1.26
HMGXB4-207ENST00000498212 AVPI1Q5T686 147 aa7.21□□□□□ -1.26
HMGXB4-207ENST00000498212 DNM1P34Q6PK57 102 aa7.21□□□□□ -1.26
HMGXB4-207ENST00000498212 VASH1Q7L8A9 365 aaPredicted RBP7.21□□□□□ -1.26
HMGXB4-207ENST00000498212 ZER1Q7Z7L7 766 aa7.21□□□□□ -1.26
HMGXB4-207ENST00000498212 JAZF1Q86VZ6 243 aa7.21□□□□□ -1.26
HMGXB4-207ENST00000498212 ZDHHC21Q8IVQ6 265 aa7.21□□□□□ -1.26
HMGXB4-207ENST00000498212 GLB1L2Q8IW92 636 aa7.21□□□□□ -1.26
HMGXB4-207ENST00000498212 PHC2Q8IXK0 858 aa7.21□□□□□ -1.26
HMGXB4-207ENST00000498212 NPEPL1Q8NDH3 523 aa7.21□□□□□ -1.26
HMGXB4-207ENST00000498212 ELMOD3Q96FG2 381 aa7.21□□□□□ -1.26
HMGXB4-207ENST00000498212 ERMAPQ96PL5 475 aaPredicted RBP7.21□□□□□ -1.26
HMGXB4-207ENST00000498212 DIRC2Q96SL1 478 aa7.21□□□□□ -1.26
HMGXB4-207ENST00000498212 GPA33Q99795 319 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms