RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 CENPEQ02224 2701 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 RPL36A-HNRNPH2H7BZ11 118 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 PGA4P0DJD7 388 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 PGA3P0DJD8 388 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 LIPAP38571 399 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 CDH15P55291 814 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 TMEM244Q5VVB8 128 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 TMEM236Q5W0B7 351 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 ZNF433Q8N7K0 673 aaPredicted RBP7.6□□□□□ -1.19
U2AF1-212ENST00000496462 OR52H1Q8NGJ2 320 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 OR1F12Q8NHA8 337 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 HDAC2Q92769 488 aaKnown RBP7.6□□□□□ -1.19
U2AF1-212ENST00000496462 C1QTNF6Q9BXI9 259 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 GSTK1Q9Y2Q3 226 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 NKX2-6A6NCS4 301 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 SLC16A6O15403 523 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 SLC2A10O95528 541 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 MRPL3P09001 348 aaKnown RBP7.6□□□□□ -1.19
U2AF1-212ENST00000496462 COX5BP10606 129 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 DNASE1P24855 282 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 MAPK3P27361 379 aaPredicted RBP7.6□□□□□ -1.19
U2AF1-212ENST00000496462 RPS4XP62701 263 aaKnown RBP7.6□□□□□ -1.19
U2AF1-212ENST00000496462 SLC3A1Q07837 685 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 SP5Q6BEB4 398 aaPredicted RBP7.6□□□□□ -1.19
U2AF1-212ENST00000496462 ZNF322Q6U7Q0 402 aaPredicted RBP7.6□□□□□ -1.19
U2AF1-212ENST00000496462 SPATC1Q76KD6 591 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 TIGD4Q8IY51 512 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 OR8S1Q8NH09 359 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 PHF21AQ96BD5 680 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 S100PBPQ96BU1 408 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 MICU1Q9BPX6 476 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 RAB1BQ9H0U4 201 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 RGCCQ9H4X1 137 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 EMC7Q9NPA0 242 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 ATPIF1Q9UII2 106 aa7.6□□□□□ -1.19
U2AF1-212ENST00000496462 ADAM11O75078 769 aa7.59□□□□□ -1.19
U2AF1-212ENST00000496462 EDNRAP25101 427 aa7.59□□□□□ -1.19
U2AF1-212ENST00000496462 DDOSTP39656 456 aa7.59□□□□□ -1.19
U2AF1-212ENST00000496462 CDK5Q00535 292 aa7.59□□□□□ -1.19
U2AF1-212ENST00000496462 LTBQ06643 244 aa7.59□□□□□ -1.19
U2AF1-212ENST00000496462 FAM27E3Q08E93 113 aa7.59□□□□□ -1.19
U2AF1-212ENST00000496462 DEGS2Q6QHC5 323 aa7.59□□□□□ -1.19
U2AF1-212ENST00000496462 KCNK17Q96T54 332 aa7.59□□□□□ -1.19
U2AF1-212ENST00000496462 TBX5Q99593 518 aa7.59□□□□□ -1.19
U2AF1-212ENST00000496462 BARD1Q99728 777 aaKnown RBP7.59□□□□□ -1.19
U2AF1-212ENST00000496462 BARX1Q9HBU1 254 aaPredicted RBP7.59□□□□□ -1.19
U2AF1-212ENST00000496462 DUSP13Q9UII6 198 aa7.59□□□□□ -1.19
U2AF1-212ENST00000496462 J3QLW9 94 aa7.59□□□□□ -1.19
U2AF1-212ENST00000496462 J3QW42 95 aa7.59□□□□□ -1.19
U2AF1-212ENST00000496462 HSMCR30P0CW71 290 aa7.59□□□□□ -1.19
U2AF1-212ENST00000496462 ZNF19P17023 458 aa7.59□□□□□ -1.19
U2AF1-212ENST00000496462 SLC25A47Q6Q0C1 308 aa7.59□□□□□ -1.19
U2AF1-212ENST00000496462 DRAM2Q6UX65 266 aa7.59□□□□□ -1.19
U2AF1-212ENST00000496462 AHSA2Q719I0 299 aa7.59□□□□□ -1.19
U2AF1-212ENST00000496462 SPERTQ8NA61 448 aa7.59□□□□□ -1.19
U2AF1-212ENST00000496462 CSNK2A3Q8NEV1 391 aa7.59□□□□□ -1.19
U2AF1-212ENST00000496462 TIMD4Q96H15 378 aa7.59□□□□□ -1.19
U2AF1-212ENST00000496462 COQ7Q99807 217 aa7.59□□□□□ -1.19
U2AF1-212ENST00000496462 MND1Q9BWT6 205 aa7.59□□□□□ -1.19
U2AF1-212ENST00000496462 EXOSC4Q9NPD3 245 aaKnown RBP7.59□□□□□ -1.19
U2AF1-212ENST00000496462 CNOT2Q9NZN8 540 aaKnown RBP7.59□□□□□ -1.19
U2AF1-212ENST00000496462 CGGBP1Q9UFW8 167 aaPredicted RBP7.59□□□□□ -1.19
U2AF1-212ENST00000496462 C5orf49A4QMS7 147 aa7.59□□□□□ -1.2
U2AF1-212ENST00000496462 METTL15A6NJ78 407 aa7.59□□□□□ -1.2
U2AF1-212ENST00000496462 ACOD1A6NK06 481 aa7.59□□□□□ -1.2
U2AF1-212ENST00000496462 FAM183AA6NL82 134 aa7.59□□□□□ -1.2
U2AF1-212ENST00000496462 H3BUI4 141 aa7.59□□□□□ -1.2
U2AF1-212ENST00000496462 MRPS14O60783 128 aaKnown RBP7.59□□□□□ -1.2
U2AF1-212ENST00000496462 GATBO75879 557 aaKnown RBP7.59□□□□□ -1.2
U2AF1-212ENST00000496462 SEC14L2O76054 403 aa7.59□□□□□ -1.2
U2AF1-212ENST00000496462 RPP14O95059 124 aaKnown RBP7.59□□□□□ -1.2
U2AF1-212ENST00000496462 HLA-HP01893 362 aa7.59□□□□□ -1.2
U2AF1-212ENST00000496462 ZNF32P17041 273 aa7.59□□□□□ -1.2
U2AF1-212ENST00000496462 UGT2B10P36537 528 aa7.59□□□□□ -1.2
U2AF1-212ENST00000496462 CRYBA2P53672 197 aa7.59□□□□□ -1.2
U2AF1-212ENST00000496462 RAB39AQ14964 217 aa7.59□□□□□ -1.2
U2AF1-212ENST00000496462 TRAM1Q15629 374 aa7.59□□□□□ -1.2
U2AF1-212ENST00000496462 PABPC1L2AQ5JQF8 200 aa7.59□□□□□ -1.2
U2AF1-212ENST00000496462 KCTD8Q6ZWB6 473 aa7.59□□□□□ -1.2
U2AF1-212ENST00000496462 DPY19L4Q7Z388 723 aa7.59□□□□□ -1.2
U2AF1-212ENST00000496462 DCXRQ7Z4W1 244 aa7.59□□□□□ -1.2
U2AF1-212ENST00000496462 EGFL6Q8IUX8 553 aa7.59□□□□□ -1.2
U2AF1-212ENST00000496462 ABHD4Q8TB40 342 aa7.59□□□□□ -1.2
U2AF1-212ENST00000496462 TEAD3Q99594 435 aa7.59□□□□□ -1.2
U2AF1-212ENST00000496462 DECR2Q9NUI1 292 aa7.59□□□□□ -1.2
U2AF1-212ENST00000496462 VNN3Q9NY84 501 aa7.59□□□□□ -1.2
U2AF1-212ENST00000496462 MAST4O15021 2626 aa7.59□□□□□ -1.2
U2AF1-212ENST00000496462 H3BNX3 289 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 M0R135 149 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 GYPBP06028 91 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 STOMP27105 288 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 CXCR4P61073 352 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 MVKQ03426 396 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 FOXF2Q12947 444 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 CARTPTQ16568 116 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 MESTQ5EB52 335 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 THSD4Q6ZMP0 1018 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 COMTD1Q86VU5 262 aa7.58□□□□□ -1.2
U2AF1-212ENST00000496462 CHERPQ8IWX8 916 aaKnown RBP7.58□□□□□ -1.2
U2AF1-212ENST00000496462 PNLDC1Q8NA58 520 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms