RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 PCNX2A6NKB5 2137 aa6.19□□□□□ -1.42
USP39-219ENST00000496047 MYO15AQ9UKN7 3530 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 TEX51A0A1B0GUA7 166 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 LOC102725191A0A1B0GVB3 256 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 LINC00854A0A1B0GVQ3 168 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 NAP1L6A6NFF2 107 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 OR4C45A6NMZ5 311 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 IFITM5A6NNB3 132 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 C17orf51A8MQB3 221 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 DCTN6O00399 190 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 CTDSPLO15194 276 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 MAGEB4O15481 346 aaPredicted RBP6.18□□□□□ -1.42
USP39-219ENST00000496047 RAD1O60671 282 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 ZNF354AO60765 605 aaPredicted RBP6.18□□□□□ -1.42
USP39-219ENST00000496047 LRP3O75074 770 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 DHFRP00374 187 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 ERCC1P07992 297 aaPredicted RBP6.18□□□□□ -1.42
USP39-219ENST00000496047 CCL3P10147 92 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 PSKH1P11801 424 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 CD59P13987 128 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 FSTP19883 344 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 SOX2P48431 317 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 EIF2B2P49770 351 aaKnown RBP6.18□□□□□ -1.42
USP39-219ENST00000496047 MMP15P51511 669 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 ART1P52961 327 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 OR10A3P58181 314 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 GRB2P62993 217 aaKnown RBP6.18□□□□□ -1.42
USP39-219ENST00000496047 RAC1P63000 192 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 TAGLNQ01995 201 aaKnown RBP6.18□□□□□ -1.42
USP39-219ENST00000496047 POU4F3Q15319 338 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 BAK1Q16611 211 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 WDR38Q5JTN6 314 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 FAM27D1Q5T7N8 215 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 HES5Q5TA89 166 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 AGAP6Q5VW22 663 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 CDCP2Q5VXM1 449 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 TIGD3Q6B0B8 471 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 STAC2Q6ZMT1 411 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 RHOUQ7L0Q8 258 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 DCXRQ7Z4W1 244 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 PPP1R32Q7Z5V6 425 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 WDSUB1Q8N9V3 476 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 CLEC1AQ8NC01 280 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 SLC26A10Q8NG04 563 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 OR4M1Q8NGD0 313 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 OR13C3Q8NGS6 347 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 POC1BQ8TC44 478 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 LGALS14Q8TCE9 139 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 CHAC2Q8WUX2 184 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 ZNRF4Q8WWF5 429 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 TMEM106AQ96A25 262 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 FOXRED1Q96CU9 486 aaPredicted RBP6.18□□□□□ -1.42
USP39-219ENST00000496047 SFXN2Q96NB2 322 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 AGAP4Q96P64 663 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 SDHCQ99643 169 aaPredicted RBP6.18□□□□□ -1.42
USP39-219ENST00000496047 KCNJ15Q99712 375 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 KLHDC3Q9BQ90 382 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 SF3B5Q9BWJ5 86 aaKnown RBP6.18□□□□□ -1.42
USP39-219ENST00000496047 SLC25A18Q9H1K4 315 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 DPAGT1Q9H3H5 408 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 TMEM185BQ9H7F4 350 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 PPP1R3EQ9H7J1 279 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 RNF121Q9H920 327 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 SEC61A2Q9H9S3 476 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 NEK6Q9HC98 313 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 DIABLOQ9NR28 239 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 MED29Q9NX70 200 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 P4HTMQ9NXG6 502 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 QPCTLQ9NXS2 382 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 SLCO1C1Q9NYB5 712 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 FRRS1LQ9P0K9 344 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 STEAP1Q9UHE8 339 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 ZNF221Q9UK13 617 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 TBC1D24Q9ULP9 559 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 KLHDC2Q9Y2U9 406 aa6.18□□□□□ -1.42
USP39-219ENST00000496047 MRPS18CQ9Y3D5 142 aaKnown RBP6.18□□□□□ -1.42
USP39-219ENST00000496047 AK6Q9Y3D8 172 aaKnown RBP6.18□□□□□ -1.42
USP39-219ENST00000496047 ALPK2Q86TB3 2170 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 A0A0G2JK05 382 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 A0A1B0GVI7 797 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 A0A1W2PPK0 400 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 SHISA3A0PJX4 238 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 SHISA8B8ZZ34 492 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 ADAM10O14672 748 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 TFECO14948 347 aaPredicted RBP6.17□□□□□ -1.42
USP39-219ENST00000496047 CCNKO75909 580 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 SCGNO76038 276 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 MAS1P04201 325 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 EIF4EP06730 217 aaKnown RBP6.17□□□□□ -1.42
USP39-219ENST00000496047 CELA2AP08217 269 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 PGA4P0DJD7 388 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 PGA3P0DJD8 388 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 HLA-DOBP13765 273 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 ZNF20P17024 532 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 ATF1P18846 271 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 POU3F2P20265 443 aaPredicted RBP6.17□□□□□ -1.42
USP39-219ENST00000496047 IL11P20809 199 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 SDHBP21912 280 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 ENPP1P22413 925 aa6.17□□□□□ -1.42
USP39-219ENST00000496047 ITGA3P26006 1051 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms