RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 IPCEF1Q8WWN9 437 aaPredicted RBP10.85□□□□□ -0.67
PTPRF-214ENST00000496043 GTF3AQ92664 365 aaKnown RBP10.85□□□□□ -0.67
PTPRF-214ENST00000496043 RAB1CQ92928 201 aa10.85□□□□□ -0.67
PTPRF-214ENST00000496043 TMEM186Q96B77 213 aa10.85□□□□□ -0.67
PTPRF-214ENST00000496043 ELMOD3Q96FG2 381 aa10.85□□□□□ -0.67
PTPRF-214ENST00000496043 TIMD4Q96H15 378 aa10.85□□□□□ -0.67
PTPRF-214ENST00000496043 DIRC2Q96SL1 478 aa10.85□□□□□ -0.67
PTPRF-214ENST00000496043 RERGLQ9H628 205 aa10.85□□□□□ -0.67
PTPRF-214ENST00000496043 SAP30LQ9HAJ7 183 aa10.85□□□□□ -0.67
PTPRF-214ENST00000496043 TBCCD1Q9NVR7 557 aa10.85□□□□□ -0.67
PTPRF-214ENST00000496043 HIF1ANQ9NWT6 349 aa10.85□□□□□ -0.67
PTPRF-214ENST00000496043 CGGBP1Q9UFW8 167 aaPredicted RBP10.85□□□□□ -0.67
PTPRF-214ENST00000496043 ZDHHC8Q9ULC8 765 aa10.85□□□□□ -0.67
PTPRF-214ENST00000496043 GRIP1Q9Y3R0 1128 aa10.85□□□□□ -0.67
PTPRF-214ENST00000496043 TRBV4-1A0A0J9YWV2 114 aa10.84□□□□□ -0.67
PTPRF-214ENST00000496043 FAM157AC9JC47 383 aa10.84□□□□□ -0.67
PTPRF-214ENST00000496043 CLDN25C9JDP6 229 aa10.84□□□□□ -0.67
PTPRF-214ENST00000496043 SGCEO43556 437 aa10.84□□□□□ -0.67
PTPRF-214ENST00000496043 DIRAS1O95057 198 aa10.84□□□□□ -0.67
PTPRF-214ENST00000496043 ABHD16AO95870 558 aa10.84□□□□□ -0.67
PTPRF-214ENST00000496043 IGHV1-46P01743 117 aa10.84□□□□□ -0.67
PTPRF-214ENST00000496043 MSMBP08118 114 aa10.84□□□□□ -0.67
PTPRF-214ENST00000496043 ADH4P08319 380 aa10.84□□□□□ -0.67
PTPRF-214ENST00000496043 CTLA4P16410 223 aa10.84□□□□□ -0.67
PTPRF-214ENST00000496043 GSTM3P21266 225 aa10.84□□□□□ -0.67
PTPRF-214ENST00000496043 LIMS1P48059 325 aa10.84□□□□□ -0.67
PTPRF-214ENST00000496043 LSM6P62312 80 aaKnown RBP10.84□□□□□ -0.67
PTPRF-214ENST00000496043 SLC3A1Q07837 685 aa10.84□□□□□ -0.67
PTPRF-214ENST00000496043 KRR1Q13601 381 aaKnown RBP10.84□□□□□ -0.67
PTPRF-214ENST00000496043 AVPI1Q5T686 147 aa10.84□□□□□ -0.67
PTPRF-214ENST00000496043 ACSM5Q6NUN0 579 aa10.84□□□□□ -0.67
PTPRF-214ENST00000496043 GLB1L2Q8IW92 636 aa10.84□□□□□ -0.67
PTPRF-214ENST00000496043 RFLNBQ8N5W9 214 aa10.84□□□□□ -0.67
PTPRF-214ENST00000496043 OR51F2Q8NH61 342 aa10.84□□□□□ -0.67
PTPRF-214ENST00000496043 CCL17Q92583 94 aa10.84□□□□□ -0.67
PTPRF-214ENST00000496043 MCUR1Q96AQ8 359 aa10.84□□□□□ -0.67
PTPRF-214ENST00000496043 RASD2Q96D21 266 aa10.84□□□□□ -0.67
PTPRF-214ENST00000496043 RSRC1Q96IZ7 334 aaKnown RBP10.84□□□□□ -0.67
PTPRF-214ENST00000496043 DHRS1Q96LJ7 313 aa10.84□□□□□ -0.67
PTPRF-214ENST00000496043 COG8Q96MW5 612 aa10.84□□□□□ -0.67
PTPRF-214ENST00000496043 GPX7Q96SL4 187 aaPredicted RBP10.84□□□□□ -0.67
PTPRF-214ENST00000496043 CDRT15Q96T59 188 aa10.84□□□□□ -0.67
PTPRF-214ENST00000496043 REPIN1Q9BWE0 567 aaKnown RBP10.84□□□□□ -0.67
PTPRF-214ENST00000496043 ZNF665Q9H7R5 613 aa10.84□□□□□ -0.67
PTPRF-214ENST00000496043 LPAR2Q9HBW0 351 aa10.84□□□□□ -0.67
PTPRF-214ENST00000496043 VSX1Q9NZR4 365 aaPredicted RBP10.84□□□□□ -0.67
PTPRF-214ENST00000496043 METRNQ9UJH8 293 aa10.84□□□□□ -0.67
PTPRF-214ENST00000496043 COA3Q9Y2R0 106 aaPredicted RBP10.84□□□□□ -0.67
PTPRF-214ENST00000496043 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.84□□□□□ -0.677e-12■□□□□ 9.8
PTPRF-214ENST00000496043 TRAV20A0A0B4J274 112 aa10.83□□□□□ -0.68
PTPRF-214ENST00000496043 SOCS2O14508 198 aa10.83□□□□□ -0.68
PTPRF-214ENST00000496043 IMPA2O14732 288 aa10.83□□□□□ -0.68
PTPRF-214ENST00000496043 TIMM8AO60220 97 aaPredicted RBP10.83□□□□□ -0.68
PTPRF-214ENST00000496043 DOK2O60496 412 aa10.83□□□□□ -0.68
PTPRF-214ENST00000496043 GADD45GO95257 159 aa10.83□□□□□ -0.68
PTPRF-214ENST00000496043 TXNDC12O95881 172 aa10.83□□□□□ -0.68
PTPRF-214ENST00000496043 HSD17B1P14061 328 aa10.83□□□□□ -0.68
PTPRF-214ENST00000496043 HTR5AP47898 357 aa10.83□□□□□ -0.68
PTPRF-214ENST00000496043 PSG7Q13046 419 aa10.83□□□□□ -0.68
PTPRF-214ENST00000496043 AQP6Q13520 282 aa10.83□□□□□ -0.68
PTPRF-214ENST00000496043 SEC23BQ15437 767 aa10.83□□□□□ -0.68
PTPRF-214ENST00000496043 KRTAP24-1Q3LI83 254 aa10.83□□□□□ -0.68
PTPRF-214ENST00000496043 ZMAT1Q5H9K5 638 aa10.83□□□□□ -0.68
PTPRF-214ENST00000496043 MTX3Q5HYI7 312 aa10.83□□□□□ -0.68
PTPRF-214ENST00000496043 SAMD4BQ5PRF9 694 aaKnown RBP10.83□□□□□ -0.68
PTPRF-214ENST00000496043 FAHD2BQ6P2I3 314 aaPredicted RBP10.83□□□□□ -0.68
PTPRF-214ENST00000496043 SMARCD3Q6STE5 483 aa10.83□□□□□ -0.68
PTPRF-214ENST00000496043 THSD4Q6ZMP0 1018 aa10.83□□□□□ -0.68
PTPRF-214ENST00000496043 RFPL4BQ6ZWI9 263 aa10.83□□□□□ -0.68
PTPRF-214ENST00000496043 VASH1Q7L8A9 365 aaPredicted RBP10.83□□□□□ -0.68
PTPRF-214ENST00000496043 ADCK1Q86TW2 530 aa10.83□□□□□ -0.68
PTPRF-214ENST00000496043 FAM86B1Q8N7N1 296 aa10.83□□□□□ -0.68
PTPRF-214ENST00000496043 NPEPL1Q8NDH3 523 aa10.83□□□□□ -0.68
PTPRF-214ENST00000496043 PTP4A1Q93096 173 aa10.83□□□□□ -0.68
PTPRF-214ENST00000496043 RAB39BQ96DA2 213 aa10.83□□□□□ -0.68
PTPRF-214ENST00000496043 FAHD2AQ96GK7 314 aa10.83□□□□□ -0.68
PTPRF-214ENST00000496043 NSMCE2Q96MF7 247 aa10.83□□□□□ -0.68
PTPRF-214ENST00000496043 LRRC37BQ96QE4 947 aa10.83□□□□□ -0.68
PTPRF-214ENST00000496043 FUZQ9BT04 418 aa10.83□□□□□ -0.68
PTPRF-214ENST00000496043 NUAK2Q9H093 628 aa10.83□□□□□ -0.68
PTPRF-214ENST00000496043 SYT4Q9H2B2 425 aa10.83□□□□□ -0.68
PTPRF-214ENST00000496043 PLEK2Q9NYT0 353 aa10.83□□□□□ -0.68
PTPRF-214ENST00000496043 CD300AQ9UGN4 299 aa10.83□□□□□ -0.68
PTPRF-214ENST00000496043 IL20RAQ9UHF4 553 aa10.83□□□□□ -0.68
PTPRF-214ENST00000496043 TAGLN3Q9UI15 199 aa10.83□□□□□ -0.68
PTPRF-214ENST00000496043 MAGEL2Q9UJ55 1249 aa10.83□□□□□ -0.68
PTPRF-214ENST00000496043 STARD10Q9Y365 291 aa10.83□□□□□ -0.68
PTPRF-214ENST00000496043 WIPI2Q9Y4P8 454 aa10.83□□□□□ -0.68
PTPRF-214ENST00000496043 ZSCAN5BA6NJL1 495 aa10.82□□□□□ -0.68
PTPRF-214ENST00000496043 TCF21O43680 179 aa10.82□□□□□ -0.68
PTPRF-214ENST00000496043 MPZL1O95297 269 aa10.82□□□□□ -0.68
PTPRF-214ENST00000496043 CD55P08174 381 aa10.82□□□□□ -0.68
PTPRF-214ENST00000496043 CRABP1P29762 137 aa10.82□□□□□ -0.68
PTPRF-214ENST00000496043 MSX2P35548 267 aaPredicted RBP10.82□□□□□ -0.68
PTPRF-214ENST00000496043 IFNGR2P38484 337 aa10.82□□□□□ -0.68
PTPRF-214ENST00000496043 CDKN2AP42771 156 aaKnown RBP10.82□□□□□ -0.68
PTPRF-214ENST00000496043 CENPAP49450 140 aa10.82□□□□□ -0.68
PTPRF-214ENST00000496043 SPIBQ01892 262 aa10.82□□□□□ -0.68
PTPRF-214ENST00000496043 CDK5R2Q13319 367 aa10.82□□□□□ -0.68
PTPRF-214ENST00000496043 KCNMB1Q16558 191 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms