RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 KLHL21Q9UJP4 597 aa9.86□□□□□ -0.83
VTI1A-208ENST00000494728 SIGLEC7Q9Y286 467 aa9.86□□□□□ -0.83
VTI1A-208ENST00000494728 TIMM10BQ9Y5J6 103 aa9.86□□□□□ -0.83
VTI1A-208ENST00000494728 V9GYQ6 96 aa9.86□□□□□ -0.83
VTI1A-208ENST00000494728 PRSS37A4D1T9 235 aa9.85□□□□□ -0.83
VTI1A-208ENST00000494728 HTR3EA5X5Y0 456 aa9.85□□□□□ -0.83
VTI1A-208ENST00000494728 DCTN6O00399 190 aa9.85□□□□□ -0.83
VTI1A-208ENST00000494728 SOCS2O14508 198 aa9.85□□□□□ -0.83
VTI1A-208ENST00000494728 DOK2O60496 412 aa9.85□□□□□ -0.83
VTI1A-208ENST00000494728 PTP4A3O75365 173 aa9.85□□□□□ -0.83
VTI1A-208ENST00000494728 ADH4P08319 380 aa9.85□□□□□ -0.83
VTI1A-208ENST00000494728 DBHP09172 617 aa9.85□□□□□ -0.83
VTI1A-208ENST00000494728 GCH1P30793 250 aa9.85□□□□□ -0.83
VTI1A-208ENST00000494728 HTR5AP47898 357 aa9.85□□□□□ -0.83
VTI1A-208ENST00000494728 PSME3P61289 254 aa9.85□□□□□ -0.83
VTI1A-208ENST00000494728 MEP1BQ16820 701 aa9.85□□□□□ -0.83
VTI1A-208ENST00000494728 ANKDD1AQ495B1 522 aa9.85□□□□□ -0.83
VTI1A-208ENST00000494728 FGD3Q5JSP0 725 aa9.85□□□□□ -0.83
VTI1A-208ENST00000494728 FAHD2BQ6P2I3 314 aaPredicted RBP9.85□□□□□ -0.83
VTI1A-208ENST00000494728 FKBP9P1Q75LS8 142 aa9.85□□□□□ -0.83
VTI1A-208ENST00000494728 RNF113BQ8IZP6 322 aaKnown RBP9.85□□□□□ -0.83
VTI1A-208ENST00000494728 CCL17Q92583 94 aa9.85□□□□□ -0.83
VTI1A-208ENST00000494728 ELMOD3Q96FG2 381 aa9.85□□□□□ -0.83
VTI1A-208ENST00000494728 FAHD2AQ96GK7 314 aa9.85□□□□□ -0.83
VTI1A-208ENST00000494728 RSRC1Q96IZ7 334 aaKnown RBP9.85□□□□□ -0.83
VTI1A-208ENST00000494728 C4orf45Q96LM5 186 aa9.85□□□□□ -0.83
VTI1A-208ENST00000494728 TSSK2Q96PF2 358 aa9.85□□□□□ -0.83
VTI1A-208ENST00000494728 GPX7Q96SL4 187 aaPredicted RBP9.85□□□□□ -0.83
VTI1A-208ENST00000494728 HOPXQ9BPY8 73 aaPredicted RBP9.85□□□□□ -0.83
VTI1A-208ENST00000494728 ASH2LQ9UBL3 628 aa9.85□□□□□ -0.83
VTI1A-208ENST00000494728 EIF3KQ9UBQ5 218 aaKnown RBP9.85□□□□□ -0.83
VTI1A-208ENST00000494728 GPR160Q9UJ42 338 aa9.85□□□□□ -0.83
VTI1A-208ENST00000494728 TRAV20A0A0B4J274 112 aa9.84□□□□□ -0.83
VTI1A-208ENST00000494728 A0A1W2PRQ8 180 aa9.84□□□□□ -0.83
VTI1A-208ENST00000494728 PLSCR5A0PG75 271 aa9.84□□□□□ -0.83
VTI1A-208ENST00000494728 OR6C6A6NF89 314 aa9.84□□□□□ -0.83
VTI1A-208ENST00000494728 H3BSA7 217 aa9.84□□□□□ -0.83
VTI1A-208ENST00000494728 SGCEO43556 437 aa9.84□□□□□ -0.83
VTI1A-208ENST00000494728 ABHD16AO95870 558 aa9.84□□□□□ -0.83
VTI1A-208ENST00000494728 SEMG1P04279 462 aa9.84□□□□□ -0.83
VTI1A-208ENST00000494728 H1F0P07305 194 aaKnown RBP9.84□□□□□ -0.83
VTI1A-208ENST00000494728 CD55P08174 381 aa9.84□□□□□ -0.83
VTI1A-208ENST00000494728 EPHA1P21709 976 aa9.84□□□□□ -0.83
VTI1A-208ENST00000494728 ANOS1P23352 680 aa9.84□□□□□ -0.83
VTI1A-208ENST00000494728 SDHAP31040 664 aa9.84□□□□□ -0.83
VTI1A-208ENST00000494728 IFNA8P32881 189 aa9.84□□□□□ -0.83
VTI1A-208ENST00000494728 SEC61A1P61619 476 aaKnown RBP9.84□□□□□ -0.83
VTI1A-208ENST00000494728 DGCR6Q14129 220 aa9.84□□□□□ -0.83
VTI1A-208ENST00000494728 HFEQ30201 348 aa9.84□□□□□ -0.83
VTI1A-208ENST00000494728 CCDC92Q53HC0 331 aaPredicted RBP9.84□□□□□ -0.83
VTI1A-208ENST00000494728 SYT9Q86SS6 491 aa9.84□□□□□ -0.83
VTI1A-208ENST00000494728 ALDH16A1Q8IZ83 802 aa9.84□□□□□ -0.83
VTI1A-208ENST00000494728 FNDC8Q8TC99 324 aa9.84□□□□□ -0.83
VTI1A-208ENST00000494728 DHRS1Q96LJ7 313 aa9.84□□□□□ -0.83
VTI1A-208ENST00000494728 ANKRD19PQ9H560 264 aa9.84□□□□□ -0.83
VTI1A-208ENST00000494728 RERGLQ9H628 205 aa9.84□□□□□ -0.83
VTI1A-208ENST00000494728 EFCAB1Q9HAE3 211 aa9.84□□□□□ -0.83
VTI1A-208ENST00000494728 NRIP3Q9NQ35 241 aa9.84□□□□□ -0.83
VTI1A-208ENST00000494728 VSX1Q9NZR4 365 aaPredicted RBP9.84□□□□□ -0.83
VTI1A-208ENST00000494728 GRHPRQ9UBQ7 328 aa9.84□□□□□ -0.83
VTI1A-208ENST00000494728 OPN4Q9UHM6 478 aa9.84□□□□□ -0.83
VTI1A-208ENST00000494728 PURGQ9UJV8 347 aaKnown RBP9.84□□□□□ -0.83
VTI1A-208ENST00000494728 NDRG4Q9ULP0 352 aaKnown RBP9.84□□□□□ -0.83
VTI1A-208ENST00000494728 COA3Q9Y2R0 106 aaPredicted RBP9.84□□□□□ -0.83
VTI1A-208ENST00000494728 AP3M1Q9Y2T2 418 aa9.84□□□□□ -0.83
VTI1A-208ENST00000494728 STARD10Q9Y365 291 aa9.84□□□□□ -0.83
VTI1A-208ENST00000494728 GRIP1Q9Y3R0 1128 aa9.84□□□□□ -0.83
VTI1A-208ENST00000494728 VWFP04275 2813 aa9.84□□□□□ -0.83
VTI1A-208ENST00000494728 ISPDA4D126 451 aa9.83□□□□□ -0.84
VTI1A-208ENST00000494728 C12orf71A8MTZ7 269 aa9.83□□□□□ -0.84
VTI1A-208ENST00000494728 XKRYO14609 159 aa9.83□□□□□ -0.84
VTI1A-208ENST00000494728 RER1O15258 196 aa9.83□□□□□ -0.84
VTI1A-208ENST00000494728 TIMM8AO60220 97 aaPredicted RBP9.83□□□□□ -0.84
VTI1A-208ENST00000494728 SLC16A7O60669 478 aa9.83□□□□□ -0.84
VTI1A-208ENST00000494728 CCDC22O60826 627 aa9.83□□□□□ -0.84
VTI1A-208ENST00000494728 NDUFB2O95178 105 aa9.83□□□□□ -0.84
VTI1A-208ENST00000494728 PPP1R3DO95685 299 aa9.83□□□□□ -0.84
VTI1A-208ENST00000494728 FSHBP01225 129 aa9.83□□□□□ -0.84
VTI1A-208ENST00000494728 IGHV2-70P01814 119 aa9.83□□□□□ -0.84
VTI1A-208ENST00000494728 MT-ND5P03915 603 aa9.83□□□□□ -0.84
VTI1A-208ENST00000494728 PCMT1P22061 227 aa9.83□□□□□ -0.84
VTI1A-208ENST00000494728 ZFP36P26651 326 aaKnown RBP9.83□□□□□ -0.84
VTI1A-208ENST00000494728 MSX2P35548 267 aaPredicted RBP9.83□□□□□ -0.84
VTI1A-208ENST00000494728 CDKN2AP42771 156 aaKnown RBP9.83□□□□□ -0.84
VTI1A-208ENST00000494728 PRSS12P56730 875 aa9.83□□□□□ -0.84
VTI1A-208ENST00000494728 PCBD1P61457 104 aa9.83□□□□□ -0.84
VTI1A-208ENST00000494728 LCN2P80188 198 aa9.83□□□□□ -0.84
VTI1A-208ENST00000494728 TEKQ02763 1124 aa9.83□□□□□ -0.84
VTI1A-208ENST00000494728 SCRN3Q0VDG4 424 aa9.83□□□□□ -0.84
VTI1A-208ENST00000494728 CDK5R2Q13319 367 aa9.83□□□□□ -0.84
VTI1A-208ENST00000494728 HLXQ14774 488 aaPredicted RBP9.83□□□□□ -0.84
VTI1A-208ENST00000494728 MTX3Q5HYI7 312 aa9.83□□□□□ -0.84
VTI1A-208ENST00000494728 LIPNQ5VXI9 398 aa9.83□□□□□ -0.84
VTI1A-208ENST00000494728 ACSM5Q6NUN0 579 aa9.83□□□□□ -0.84
VTI1A-208ENST00000494728 C1orf94Q6P1W5 598 aa9.83□□□□□ -0.84
VTI1A-208ENST00000494728 SHQ1Q6PI26 577 aaKnown RBP9.83□□□□□ -0.84
VTI1A-208ENST00000494728 OR52J3Q8NH60 311 aa9.83□□□□□ -0.84
VTI1A-208ENST00000494728 RAB39BQ96DA2 213 aa9.83□□□□□ -0.84
VTI1A-208ENST00000494728 SIGLEC11Q96RL6 698 aa9.83□□□□□ -0.84
VTI1A-208ENST00000494728 GAL3ST1Q99999 423 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms