RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 PLA2G12AQ9BZM1 189 aa2.39□□□□□ -2.03
NCL-210ENST00000494618 PKIBQ9C010 78 aa2.39□□□□□ -2.03
NCL-210ENST00000494618 KLHL28Q9NXS3 571 aa2.39□□□□□ -2.03
NCL-210ENST00000494618 TRMT112Q9UI30 125 aaKnown RBP2.39□□□□□ -2.03
NCL-210ENST00000494618 CTNNA3Q9UI47 895 aa2.39□□□□□ -2.03
NCL-210ENST00000494618 ZNF639Q9UID6 485 aa2.39□□□□□ -2.03
NCL-210ENST00000494618 ING4Q9UNL4 249 aa2.39□□□□□ -2.03
NCL-210ENST00000494618 GOLT1BQ9Y3E0 138 aa2.39□□□□□ -2.03
NCL-210ENST00000494618 CAMTA1Q9Y6Y1 1673 aa2.38□□□□□ -2.03
NCL-210ENST00000494618 CENPVL3A0A0U1RRI6 287 aa2.38□□□□□ -2.03
NCL-210ENST00000494618 ZNF816-ZNF321PA0A0X1KG74 233 aa2.38□□□□□ -2.03
NCL-210ENST00000494618 BTBD17A6NE02 478 aa2.38□□□□□ -2.03
NCL-210ENST00000494618 CDC7O00311 574 aa2.38□□□□□ -2.03
NCL-210ENST00000494618 DPM1O60762 260 aa2.38□□□□□ -2.03
NCL-210ENST00000494618 ZNF735P0CB33 412 aa2.38□□□□□ -2.03
NCL-210ENST00000494618 NCF2P19878 526 aaPredicted RBP2.38□□□□□ -2.03
NCL-210ENST00000494618 SSR4P51571 173 aa2.38□□□□□ -2.03
NCL-210ENST00000494618 FLI1Q01543 452 aaPredicted RBP2.38□□□□□ -2.03
NCL-210ENST00000494618 MXD1Q05195 221 aa2.38□□□□□ -2.03
NCL-210ENST00000494618 TAF9Q16594 264 aa2.38□□□□□ -2.03
NCL-210ENST00000494618 NANOGNBQ7Z5D8 188 aa2.38□□□□□ -2.03
NCL-210ENST00000494618 CDKL3Q8IVW4 592 aaPredicted RBP2.38□□□□□ -2.03
NCL-210ENST00000494618 WDFY1Q8IWB7 410 aa2.38□□□□□ -2.03
NCL-210ENST00000494618 NECAB1Q8N987 351 aa2.38□□□□□ -2.03
NCL-210ENST00000494618 SHC3Q92529 594 aa2.38□□□□□ -2.03
NCL-210ENST00000494618 GALNT14Q96FL9 552 aa2.38□□□□□ -2.03
NCL-210ENST00000494618 ZNF488Q96MN9 340 aa2.38□□□□□ -2.03
NCL-210ENST00000494618 PLIN2Q99541 437 aa2.38□□□□□ -2.03
NCL-210ENST00000494618 ZNF229Q9UJW7 825 aa2.38□□□□□ -2.03
NCL-210ENST00000494618 SHANK1Q9Y566 2161 aa2.38□□□□□ -2.03
NCL-210ENST00000494618 A0A1W2PPE3 182 aa2.37□□□□□ -2.03
NCL-210ENST00000494618 OR52A4PA6NMU1 304 aa2.37□□□□□ -2.03
NCL-210ENST00000494618 SOCS1O15524 211 aa2.37□□□□□ -2.03
NCL-210ENST00000494618 EEDO75530 441 aaKnown RBP2.37□□□□□ -2.03
NCL-210ENST00000494618 SURF6O75683 361 aaKnown RBP2.37□□□□□ -2.03
NCL-210ENST00000494618 NDUFB10O96000 172 aa2.37□□□□□ -2.03
NCL-210ENST00000494618 IL1BP01584 269 aa2.37□□□□□ -2.03
NCL-210ENST00000494618 OR5H8P0DN80 308 aa2.37□□□□□ -2.03
NCL-210ENST00000494618 MX1P20591 662 aa2.37□□□□□ -2.03
NCL-210ENST00000494618 KITLGP21583 273 aa2.37□□□□□ -2.03
NCL-210ENST00000494618 CEACAM3P40198 252 aa2.37□□□□□ -2.03
NCL-210ENST00000494618 KIR3DL2P43630 455 aa2.37□□□□□ -2.03
NCL-210ENST00000494618 DDX39BQ13838 428 aaKnown RBP2.37□□□□□ -2.03
NCL-210ENST00000494618 GK3PQ14409 553 aa2.37□□□□□ -2.03
NCL-210ENST00000494618 TGFBIQ15582 683 aa2.37□□□□□ -2.03
NCL-210ENST00000494618 CTSL3PQ5NE16 218 aa2.37□□□□□ -2.03
NCL-210ENST00000494618 CIRBP-AS1Q8TBR5 109 aa2.37□□□□□ -2.03
NCL-210ENST00000494618 TPD52L3Q96J77 140 aa2.37□□□□□ -2.03
NCL-210ENST00000494618 FRMD8P1Q9BZ68 369 aaPredicted RBP2.37□□□□□ -2.03
NCL-210ENST00000494618 GCOM2Q9BZD3 368 aaPredicted RBP2.37□□□□□ -2.03
NCL-210ENST00000494618 OR52D1Q9H346 318 aa2.37□□□□□ -2.03
NCL-210ENST00000494618 CWH43Q9H720 699 aa2.37□□□□□ -2.03
NCL-210ENST00000494618 ZNF716A6NP11 495 aa2.36□□□□□ -2.03
NCL-210ENST00000494618 MRPS12O15235 138 aaKnown RBP2.36□□□□□ -2.03
NCL-210ENST00000494618 HLA-DQB1P01920 261 aa2.36□□□□□ -2.03
NCL-210ENST00000494618 MCF2P10911 925 aa2.36□□□□□ -2.03
NCL-210ENST00000494618 KRTAP12-4P60329 112 aa2.36□□□□□ -2.03
NCL-210ENST00000494618 SPIN3Q5JUX0 258 aa2.36□□□□□ -2.03
NCL-210ENST00000494618 AVPI1Q5T686 147 aa2.36□□□□□ -2.03
NCL-210ENST00000494618 ANKRD26P1Q6NSI1 321 aa2.36□□□□□ -2.03
NCL-210ENST00000494618 SPINT4Q6UDR6 99 aa2.36□□□□□ -2.03
NCL-210ENST00000494618 SLC16A13Q7RTY0 426 aa2.36□□□□□ -2.03
NCL-210ENST00000494618 EGFL6Q8IUX8 553 aa2.36□□□□□ -2.03
NCL-210ENST00000494618 UBE2J2Q8N2K1 259 aa2.36□□□□□ -2.03
NCL-210ENST00000494618 ST20-AS1Q8NBB2 130 aa2.36□□□□□ -2.03
NCL-210ENST00000494618 APCDD1LQ8NCL9 501 aa2.36□□□□□ -2.03
NCL-210ENST00000494618 SDR9C7Q8NEX9 313 aa2.36□□□□□ -2.03
NCL-210ENST00000494618 PTX4Q96A99 478 aa2.36□□□□□ -2.03
NCL-210ENST00000494618 ZNF586Q9NXT0 402 aa2.36□□□□□ -2.03
NCL-210ENST00000494618 SUN2Q9UH99 717 aa2.36□□□□□ -2.03
NCL-210ENST00000494618 SLC7A8Q9UHI5 535 aa2.36□□□□□ -2.03
NCL-210ENST00000494618 ST3GAL6Q9Y274 331 aa2.36□□□□□ -2.03
NCL-210ENST00000494618 ATAD2BQ9ULI0 1458 aa2.36□□□□□ -2.03
NCL-210ENST00000494618 CNTNAP1P78357 1384 aa2.36□□□□□ -2.03
NCL-210ENST00000494618 H0YJW9 148 aa2.35□□□□□ -2.03
NCL-210ENST00000494618 CHST10O43529 356 aa2.35□□□□□ -2.03
NCL-210ENST00000494618 WBP4O75554 376 aaKnown RBP2.35□□□□□ -2.03
NCL-210ENST00000494618 SERPIND1P05546 499 aa2.35□□□□□ -2.03
NCL-210ENST00000494618 CD3GP09693 182 aa2.35□□□□□ -2.03
NCL-210ENST00000494618 OR8U9P0C7N5 309 aa2.35□□□□□ -2.03
NCL-210ENST00000494618 SLC2A3P11169 496 aa2.35□□□□□ -2.03
NCL-210ENST00000494618 RAB3AP20336 220 aa2.35□□□□□ -2.03
NCL-210ENST00000494618 TNFSF9P41273 254 aa2.35□□□□□ -2.03
NCL-210ENST00000494618 CRYBB2P43320 205 aa2.35□□□□□ -2.03
NCL-210ENST00000494618 KRTAP12-3P60328 96 aa2.35□□□□□ -2.03
NCL-210ENST00000494618 UBE2HP62256 183 aa2.35□□□□□ -2.03
NCL-210ENST00000494618 TMEM256Q8N2U0 113 aa2.35□□□□□ -2.03
NCL-210ENST00000494618 TMEM104Q8NE00 496 aa2.35□□□□□ -2.03
NCL-210ENST00000494618 OR1S2Q8NGQ3 325 aa2.35□□□□□ -2.03
NCL-210ENST00000494618 OR1P1Q8NH06 330 aa2.35□□□□□ -2.03
NCL-210ENST00000494618 PLPPR1Q8TBJ4 325 aa2.35□□□□□ -2.03
NCL-210ENST00000494618 PKNOX2Q96KN3 472 aa2.35□□□□□ -2.03
NCL-210ENST00000494618 HSD17B10Q99714 261 aaKnown RBP2.35□□□□□ -2.03
NCL-210ENST00000494618 LZTS2Q9BRK4 669 aa2.35□□□□□ -2.03
NCL-210ENST00000494618 NUP50Q9UKX7 468 aa2.35□□□□□ -2.03
NCL-210ENST00000494618 KCNE3Q9Y6H6 103 aa2.35□□□□□ -2.03
NCL-210ENST00000494618 DNASE2O00115 360 aaPredicted RBP2.34□□□□□ -2.03
NCL-210ENST00000494618 CLIC3O95833 236 aa2.34□□□□□ -2.03
NCL-210ENST00000494618 TGFBR1P36897 503 aa2.34□□□□□ -2.03
NCL-210ENST00000494618 HCAR3P49019 387 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms