RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 C1orf100Q5SVJ3 147 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 TPRG1LQ5T0D9 272 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 PDPK2PQ6A1A2 396 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 ERICH5Q6P6B1 374 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 TMIGD1Q6UXZ0 262 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 CDC20BQ86Y33 519 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 RBM45Q8IUH3 476 aaKnown RBP3.39□□□□□ -1.87
GTF3A-208ENST00000493903 FAM86B1Q8N7N1 296 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 CT45A3Q8NHU0 189 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 SPATA3Q8NHX4 192 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 ISOC2Q96AB3 205 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 ECHDC3Q96DC8 303 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 GLT1D1Q96MS3 346 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 SH3GL3Q99963 347 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 APOL2Q9BQE5 337 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 TRIM15Q9C019 465 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 RAB1BQ9H0U4 201 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 OR52A5Q9H2C5 316 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 OR51J1Q9H342 316 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 Q9H3A6 140 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 KIR3DX1Q9H7L2 352 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 SPACA1Q9HBV2 294 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 RETNQ9HD89 108 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 ZNF302Q9NR11 478 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 CLN6Q9NWW5 311 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 BTNL2Q9UIR0 455 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 GNPTGQ9UJJ9 305 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 PROCRQ9UNN8 238 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 RCL1Q9Y2P8 373 aaKnown RBP3.39□□□□□ -1.87
GTF3A-208ENST00000493903 YARS2Q9Y2Z4 477 aaKnown RBP3.39□□□□□ -1.87
GTF3A-208ENST00000493903 BTAF1O14981 1849 aa3.39□□□□□ -1.87
GTF3A-208ENST00000493903 CENPJQ9HC77 1338 aaPredicted RBP3.39□□□□□ -1.87
GTF3A-208ENST00000493903 BRD4O60885 1362 aaPredicted RBP3.38□□□□□ -1.87
GTF3A-208ENST00000493903 PPIP5K1Q6PFW1 1433 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 CICQ96RK0 1608 aaPredicted RBP3.38□□□□□ -1.87
GTF3A-208ENST00000493903 A0A1W2PRF3 423 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 A0A1W2PRM7 423 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 PRSS37A4D1T9 235 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 SLC22A20A6NK97 555 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 ERVV-1B6SEH8 477 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 C12orf77C9JDV5 145 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 E7EWF7 191 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 AGPAT2O15120 278 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 IGHV3-48P01763 117 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 HBE1P02100 147 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 KRT16P08779 473 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 OR1E1P30953 314 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 NBL1P41271 181 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 KCNJ3P48549 501 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 SUB1P53999 127 aaKnown RBP eCLIP3.38□□□□□ -1.87
GTF3A-208ENST00000493903 UBE2MP61081 183 aaKnown RBP3.38□□□□□ -1.87
GTF3A-208ENST00000493903 TNNC1P63316 161 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 IRX3P78415 501 aaPredicted RBP3.38□□□□□ -1.87
GTF3A-208ENST00000493903 SP4Q02446 784 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 PDIA2Q13087 525 aaKnown RBP3.38□□□□□ -1.87
GTF3A-208ENST00000493903 XRCC4Q13426 336 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 C18orf21Q32NC0 220 aaPredicted RBP3.38□□□□□ -1.87
GTF3A-208ENST00000493903 TRMT5Q32P41 509 aaKnown RBP3.38□□□□□ -1.87
GTF3A-208ENST00000493903 SPECC1LQ69YQ0 1117 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 ZNF343Q6P1L6 599 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 PRMT9Q6P2P2 845 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 COPS6Q7L5N1 327 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 ZBED8Q8IZ13 594 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 NKAPP1Q8N9T2 125 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 OR5B3Q8NH48 314 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 ITFG1Q8TB96 612 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 TMEM54Q969K7 222 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 APH1AQ96BI3 265 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 SLC25A38Q96DW6 304 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 PIK3IP1Q96FE7 263 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 DNAJC1Q96KC8 554 aaKnown RBP3.38□□□□□ -1.87
GTF3A-208ENST00000493903 SMIM14Q96QK8 99 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 ZNF184Q99676 751 aaPredicted RBP3.38□□□□□ -1.87
GTF3A-208ENST00000493903 KIR2DL4Q99706 377 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 OSBPL10Q9BXB5 764 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 ZDHHC11Q9H8X9 412 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 PATZ1Q9HBE1 687 aaKnown RBP3.38□□□□□ -1.87
GTF3A-208ENST00000493903 QPCTLQ9NXS2 382 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 ADA2Q9NZK5 511 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 CTSFQ9UBX1 484 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 ASF1AQ9Y294 204 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 USP54Q70EL1 1684 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 QRICH2Q9H0J4 1663 aa3.38□□□□□ -1.87
GTF3A-208ENST00000493903 A0A0B4J2A0 478 aa3.37□□□□□ -1.87
GTF3A-208ENST00000493903 IQCF5A8MTL0 148 aa3.37□□□□□ -1.87
GTF3A-208ENST00000493903 GMDSO60547 372 aa3.37□□□□□ -1.87
GTF3A-208ENST00000493903 AQP8O94778 261 aa3.37□□□□□ -1.87
GTF3A-208ENST00000493903 VAPBO95292 243 aa3.37□□□□□ -1.87
GTF3A-208ENST00000493903 LSM8O95777 96 aaKnown RBP3.37□□□□□ -1.87
GTF3A-208ENST00000493903 HPNP05981 417 aa3.37□□□□□ -1.87
GTF3A-208ENST00000493903 KLK1P06870 262 aa3.37□□□□□ -1.87
GTF3A-208ENST00000493903 ZNF250P15622 560 aa3.37□□□□□ -1.87
GTF3A-208ENST00000493903 HOXB6P17509 224 aaKnown RBP3.37□□□□□ -1.87
GTF3A-208ENST00000493903 LCN1P31025 176 aa3.37□□□□□ -1.87
GTF3A-208ENST00000493903 CCR8P51685 355 aa3.37□□□□□ -1.87
GTF3A-208ENST00000493903 ACTA2P62736 377 aa3.37□□□□□ -1.87
GTF3A-208ENST00000493903 ACTG2P63267 376 aa3.37□□□□□ -1.87
GTF3A-208ENST00000493903 ACTC1P68032 377 aa3.37□□□□□ -1.87
GTF3A-208ENST00000493903 ACTA1P68133 377 aa3.37□□□□□ -1.87
GTF3A-208ENST00000493903 EGFEM1PQ0D2K5 195 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms