RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 CNR1P21554 472 aa20.32■□□□□ 0.84
USF3-203ENST00000491165 NME2P22392 152 aa20.32■□□□□ 0.84
USF3-203ENST00000491165 CCR9P51686 369 aa20.32■□□□□ 0.84
USF3-203ENST00000491165 PRPS1P60891 318 aa20.32■□□□□ 0.84
USF3-203ENST00000491165 CAMK2DQ13557 499 aa20.32■□□□□ 0.84
USF3-203ENST00000491165 LINC00303Q3SY05 128 aa20.32■□□□□ 0.84
USF3-203ENST00000491165 SLC25A25Q6KCM7 469 aa20.32■□□□□ 0.84
USF3-203ENST00000491165 CCDC28AQ8IWP9 274 aa20.32■□□□□ 0.84
USF3-203ENST00000491165 ELMOD2Q8IZ81 293 aa20.32■□□□□ 0.84
USF3-203ENST00000491165 PIAS4Q8N2W9 510 aaPredicted RBP20.32■□□□□ 0.84
USF3-203ENST00000491165 ZNF433Q8N7K0 673 aaPredicted RBP20.32■□□□□ 0.84
USF3-203ENST00000491165 OR2M7Q8NG81 312 aa20.32■□□□□ 0.84
USF3-203ENST00000491165 ORAI1Q96D31 301 aa20.32■□□□□ 0.84
USF3-203ENST00000491165 SLC25A38Q96DW6 304 aa20.32■□□□□ 0.84
USF3-203ENST00000491165 TMEM41AQ96HV5 264 aa20.32■□□□□ 0.84
USF3-203ENST00000491165 DLL4Q9NR61 685 aa20.32■□□□□ 0.84
USF3-203ENST00000491165 SHISA8B8ZZ34 492 aa20.32■□□□□ 0.84
USF3-203ENST00000491165 GABARAPH6UMI1 98 aa20.32■□□□□ 0.84
USF3-203ENST00000491165 DNASE1P24855 282 aa20.32■□□□□ 0.84
USF3-203ENST00000491165 DPP4P27487 766 aa20.32■□□□□ 0.84
USF3-203ENST00000491165 AP3S2P59780 193 aa20.32■□□□□ 0.84
USF3-203ENST00000491165 ZNF766Q5HY98 468 aa20.32■□□□□ 0.84
USF3-203ENST00000491165 FAM209AQ5JX71 171 aa20.32■□□□□ 0.84
USF3-203ENST00000491165 C3orf49Q96BT1 292 aa20.32■□□□□ 0.84
USF3-203ENST00000491165 GPX7Q96SL4 187 aaPredicted RBP20.32■□□□□ 0.84
USF3-203ENST00000491165 HEXA-AS1Q9H8Q6 139 aa20.32■□□□□ 0.84
USF3-203ENST00000491165 BEX1Q9HBH7 125 aa20.32■□□□□ 0.84
USF3-203ENST00000491165 HRASLSQ9HDD0 168 aa20.32■□□□□ 0.84
USF3-203ENST00000491165 NKIRAS2Q9NYR9 191 aa20.32■□□□□ 0.84
USF3-203ENST00000491165 MRPL15Q9P015 296 aaKnown RBP20.32■□□□□ 0.84
USF3-203ENST00000491165 SERPINI2O75830 405 aa20.31■□□□□ 0.84
USF3-203ENST00000491165 FAM87AP0C7U9 286 aa20.31■□□□□ 0.84
USF3-203ENST00000491165 GRPRP30550 384 aa20.31■□□□□ 0.84
USF3-203ENST00000491165 NANOS3P60323 173 aaKnown RBP20.31■□□□□ 0.84
USF3-203ENST00000491165 CBFBQ13951 182 aa20.31■□□□□ 0.84
USF3-203ENST00000491165 LEG1Q6P5S2 330 aa20.31■□□□□ 0.84
USF3-203ENST00000491165 IGFL3Q6UXB1 125 aa20.31■□□□□ 0.84
USF3-203ENST00000491165 OR8H3Q8N146 312 aa20.31■□□□□ 0.84
USF3-203ENST00000491165 OR1J4Q8NGS1 313 aa20.31■□□□□ 0.84
USF3-203ENST00000491165 ALG12Q9BV10 488 aa20.31■□□□□ 0.84
USF3-203ENST00000491165 SLC19A3Q9BZV2 496 aa20.31■□□□□ 0.84
USF3-203ENST00000491165 SDHAF3Q9NRP4 125 aa20.31■□□□□ 0.84
USF3-203ENST00000491165 KLHL9Q9P2J3 617 aa20.31■□□□□ 0.84
USF3-203ENST00000491165 LINC00862A6NCI5 91 aa20.3■□□□□ 0.84
USF3-203ENST00000491165 NAP1L6A6NFF2 107 aa20.3■□□□□ 0.84
USF3-203ENST00000491165 PSMD9O00233 223 aa20.3■□□□□ 0.84
USF3-203ENST00000491165 GMDSO60547 372 aa20.3■□□□□ 0.84
USF3-203ENST00000491165 PRAF2O60831 178 aa20.3■□□□□ 0.84
USF3-203ENST00000491165 ZFPL1O95159 310 aa20.3■□□□□ 0.84
USF3-203ENST00000491165 SFRP4Q6FHJ7 346 aaPredicted RBP20.3■□□□□ 0.84
USF3-203ENST00000491165 FCRLAQ7L513 359 aa20.3■□□□□ 0.84
USF3-203ENST00000491165 ZNF440Q8IYI8 595 aa20.3■□□□□ 0.84
USF3-203ENST00000491165 OR52I2Q8NH67 350 aa20.3■□□□□ 0.84
USF3-203ENST00000491165 LIN7BQ9HAP6 207 aa20.3■□□□□ 0.84
USF3-203ENST00000491165 TP53TG5Q9Y2B4 290 aa20.3■□□□□ 0.84
USF3-203ENST00000491165 NPTNQ9Y639 398 aa20.3■□□□□ 0.84
USF3-203ENST00000491165 V9GY05 133 aa20.3■□□□□ 0.84
USF3-203ENST00000491165 TLN1Q9Y490 2541 aaKnown RBP20.3■□□□□ 0.84
USF3-203ENST00000491165 ANKUB1A6NFN9 424 aa20.3■□□□□ 0.84
USF3-203ENST00000491165 MKRN2OSH3BPM6 223 aa20.3■□□□□ 0.84
USF3-203ENST00000491165 CDK2AP1O14519 115 aa20.3■□□□□ 0.84
USF3-203ENST00000491165 KRT33AO76009 404 aa20.3■□□□□ 0.84
USF3-203ENST00000491165 HPXP02790 462 aa20.3■□□□□ 0.84
USF3-203ENST00000491165 ITGB2P05107 769 aa20.3■□□□□ 0.84
USF3-203ENST00000491165 PSMB1P20618 241 aaKnown RBP20.3■□□□□ 0.84
USF3-203ENST00000491165 ZP1P60852 638 aa20.3■□□□□ 0.84
USF3-203ENST00000491165 IKZF1Q13422 519 aa20.3■□□□□ 0.84
USF3-203ENST00000491165 ZNF684Q5T5D7 378 aa20.3■□□□□ 0.84
USF3-203ENST00000491165 LINC01590Q5TEZ4 76 aa20.3■□□□□ 0.84
USF3-203ENST00000491165 SLC6A19Q695T7 634 aa20.3■□□□□ 0.84
USF3-203ENST00000491165 MOSPD2Q8NHP6 518 aa20.3■□□□□ 0.84
USF3-203ENST00000491165 ZNF563Q8TA94 476 aa20.3■□□□□ 0.84
USF3-203ENST00000491165 RGP1Q92546 391 aaPredicted RBP20.3■□□□□ 0.84
USF3-203ENST00000491165 GCDHQ92947 438 aaPredicted RBP20.3■□□□□ 0.84
USF3-203ENST00000491165 SORCS2Q96PQ0 1159 aa20.3■□□□□ 0.84
USF3-203ENST00000491165 MRI1Q9BV20 369 aa20.3■□□□□ 0.84
USF3-203ENST00000491165 ZNF436Q9C0F3 470 aaPredicted RBP20.3■□□□□ 0.84
USF3-203ENST00000491165 TGM6O95932 706 aa20.29■□□□□ 0.84
USF3-203ENST00000491165 CD46P15529 392 aa20.29■□□□□ 0.84
USF3-203ENST00000491165 ZNF81P51508 661 aa20.29■□□□□ 0.84
USF3-203ENST00000491165 LGALSLQ3ZCW2 172 aaPredicted RBP20.29■□□□□ 0.84
USF3-203ENST00000491165 ELFN2Q5R3F8 820 aa20.29■□□□□ 0.84
USF3-203ENST00000491165 JAZF1Q86VZ6 243 aa20.29■□□□□ 0.84
USF3-203ENST00000491165 RBMXL3Q8N7X1 1067 aaKnown RBP20.29■□□□□ 0.84
USF3-203ENST00000491165 FAM171A2A8MVW0 826 aa20.29■□□□□ 0.84
USF3-203ENST00000491165 PRR32B1ATL7 298 aa20.29■□□□□ 0.84
USF3-203ENST00000491165 SULT1B1O43704 296 aa20.29■□□□□ 0.84
USF3-203ENST00000491165 TACSTD2P09758 323 aa20.29■□□□□ 0.84
USF3-203ENST00000491165 PMP22Q01453 160 aa20.29■□□□□ 0.84
USF3-203ENST00000491165 FAM220AQ7Z4H9 259 aa20.29■□□□□ 0.84
USF3-203ENST00000491165 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.29■□□□□ 0.84
USF3-203ENST00000491165 OR4K17Q8NGC6 315 aa20.29■□□□□ 0.84
USF3-203ENST00000491165 OR5M1Q8NGP8 315 aa20.29■□□□□ 0.84
USF3-203ENST00000491165 FCAMRQ8WWV6 532 aa20.29■□□□□ 0.84
USF3-203ENST00000491165 S100A16Q96FQ6 103 aaKnown RBP20.29■□□□□ 0.84
USF3-203ENST00000491165 FAM173AQ9BQD7 235 aa20.29■□□□□ 0.84
USF3-203ENST00000491165 CLEC4MQ9H2X3 399 aaPredicted RBP20.29■□□□□ 0.84
USF3-203ENST00000491165 PRORYQ9H606 182 aa20.29■□□□□ 0.84
USF3-203ENST00000491165 NANSQ9NR45 359 aa20.29■□□□□ 0.84
USF3-203ENST00000491165 FLVCR2Q9UPI3 526 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms