RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 OR6Q1Q8NGQ2 317 aa12.28□□□□□ -0.44
SMPD4-219ENST00000491128 SLC25A46Q96AG3 418 aa12.28□□□□□ -0.44
SMPD4-219ENST00000491128 SF3B5Q9BWJ5 86 aaKnown RBP12.28□□□□□ -0.44
SMPD4-219ENST00000491128 NOX4Q9NPH5 578 aa12.28□□□□□ -0.44
SMPD4-219ENST00000491128 PLEKHB1Q9UF11 243 aaPredicted RBP12.28□□□□□ -0.44
SMPD4-219ENST00000491128 SLC5A6Q9Y289 635 aa12.28□□□□□ -0.44
SMPD4-219ENST00000491128 KIAA1549Q9HCM3 1950 aa12.28□□□□□ -0.44
SMPD4-219ENST00000491128 ATRXP46100 2492 aa12.28□□□□□ -0.44
SMPD4-219ENST00000491128 A0A0B4J203 849 aa12.28□□□□□ -0.44
SMPD4-219ENST00000491128 CENPBD1B2RD01 187 aa12.28□□□□□ -0.44
SMPD4-219ENST00000491128 PIN1P1O15428 100 aa12.28□□□□□ -0.44
SMPD4-219ENST00000491128 H2BFMP0C1H6 154 aa12.28□□□□□ -0.44
SMPD4-219ENST00000491128 SOX6P35712 828 aa12.28□□□□□ -0.44
SMPD4-219ENST00000491128 RORCP51449 518 aa12.28□□□□□ -0.44
SMPD4-219ENST00000491128 BLVRAP53004 296 aa12.28□□□□□ -0.44
SMPD4-219ENST00000491128 GPR50Q13585 617 aa12.28□□□□□ -0.44
SMPD4-219ENST00000491128 ZNF169Q14929 603 aaPredicted RBP12.28□□□□□ -0.44
SMPD4-219ENST00000491128 CEACAM16Q2WEN9 425 aa12.28□□□□□ -0.44
SMPD4-219ENST00000491128 PLEKHN1Q494U1 663 aaPredicted RBP12.28□□□□□ -0.44
SMPD4-219ENST00000491128 NUFIP2Q7Z417 695 aaKnown RBP12.28□□□□□ -0.44
SMPD4-219ENST00000491128 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.28□□□□□ -0.44
SMPD4-219ENST00000491128 RBMXL3Q8N7X1 1067 aaKnown RBP12.28□□□□□ -0.44
SMPD4-219ENST00000491128 RNF128Q8TEB7 428 aa12.28□□□□□ -0.44
SMPD4-219ENST00000491128 RYDENQ9NUL5 291 aaKnown RBP12.28□□□□□ -0.44
SMPD4-219ENST00000491128 MCTS1Q9ULC4 181 aaKnown RBP12.28□□□□□ -0.44
SMPD4-219ENST00000491128 C5orf63A6NC05 138 aa12.27□□□□□ -0.44
SMPD4-219ENST00000491128 MRPL33O75394 65 aaKnown RBP12.27□□□□□ -0.44
SMPD4-219ENST00000491128 SC5DO75845 299 aa12.27□□□□□ -0.44
SMPD4-219ENST00000491128 SULT1C4O75897 302 aa12.27□□□□□ -0.44
SMPD4-219ENST00000491128 KRT33AO76009 404 aa12.27□□□□□ -0.44
SMPD4-219ENST00000491128 SLC2A2P11168 524 aaPredicted RBP12.27□□□□□ -0.44
SMPD4-219ENST00000491128 RIDAP52758 137 aaKnown RBP12.27□□□□□ -0.44
SMPD4-219ENST00000491128 DMRTC1Q5HYR2 192 aa12.27□□□□□ -0.44
SMPD4-219ENST00000491128 KCTD18Q6PI47 426 aaPredicted RBP12.27□□□□□ -0.44
SMPD4-219ENST00000491128 LAX1Q8IWV1 398 aa12.27□□□□□ -0.44
SMPD4-219ENST00000491128 OR2AJ1Q8NGZ0 328 aa12.27□□□□□ -0.44
SMPD4-219ENST00000491128 FNDC8Q8TC99 324 aa12.27□□□□□ -0.44
SMPD4-219ENST00000491128 NABP1Q96AH0 204 aa12.27□□□□□ -0.44
SMPD4-219ENST00000491128 SLC7A10Q9NS82 523 aa12.27□□□□□ -0.44
SMPD4-219ENST00000491128 COMMD3Q9UBI1 195 aa12.27□□□□□ -0.44
SMPD4-219ENST00000491128 AK6Q9Y3D8 172 aaKnown RBP12.27□□□□□ -0.44
SMPD4-219ENST00000491128 TPRP12270 2363 aaKnown RBP12.27□□□□□ -0.44
SMPD4-219ENST00000491128 SPTA1P02549 2419 aa12.27□□□□□ -0.44
SMPD4-219ENST00000491128 A0A096LPE4 126 aa12.27□□□□□ -0.45
SMPD4-219ENST00000491128 TMEM269A0A1B0GVZ9 245 aa12.27□□□□□ -0.45
SMPD4-219ENST00000491128 A0A1W2PPZ6 126 aa12.27□□□□□ -0.45
SMPD4-219ENST00000491128 OR4C45A6NMZ5 311 aa12.27□□□□□ -0.45
SMPD4-219ENST00000491128 LINC01387J3KSC0 135 aa12.27□□□□□ -0.45
SMPD4-219ENST00000491128 DNPH1O43598 174 aa12.27□□□□□ -0.45
SMPD4-219ENST00000491128 LMX1BO60663 402 aa12.27□□□□□ -0.45
SMPD4-219ENST00000491128 PFDN1O60925 122 aa12.27□□□□□ -0.45
SMPD4-219ENST00000491128 SLC43A1O75387 559 aa12.27□□□□□ -0.45
SMPD4-219ENST00000491128 OCM2P0CE71 109 aa12.27□□□□□ -0.45
SMPD4-219ENST00000491128 GFOD2Q3B7J2 385 aa12.27□□□□□ -0.45
SMPD4-219ENST00000491128 SLC25A35Q3KQZ1 300 aa12.27□□□□□ -0.45
SMPD4-219ENST00000491128 C3P1Q6ZMU1 363 aa12.27□□□□□ -0.45
SMPD4-219ENST00000491128 HDDC2Q7Z4H3 204 aa12.27□□□□□ -0.45
SMPD4-219ENST00000491128 GPR137CQ8N3F9 429 aa12.27□□□□□ -0.45
SMPD4-219ENST00000491128 FGFBP3Q8TAT2 258 aa12.27□□□□□ -0.45
SMPD4-219ENST00000491128 ASB17Q8WXJ9 295 aa12.27□□□□□ -0.45
SMPD4-219ENST00000491128 FBXO17Q96EF6 278 aa12.27□□□□□ -0.45
SMPD4-219ENST00000491128 MRPL48Q96GC5 212 aaKnown RBP12.27□□□□□ -0.45
SMPD4-219ENST00000491128 C4orf45Q96LM5 186 aa12.27□□□□□ -0.45
SMPD4-219ENST00000491128 SOX7Q9BT81 388 aa12.27□□□□□ -0.45
SMPD4-219ENST00000491128 C1orf198Q9H425 327 aa12.27□□□□□ -0.45
SMPD4-219ENST00000491128 TP53TG5Q9Y2B4 290 aa12.27□□□□□ -0.45
SMPD4-219ENST00000491128 ZNF281Q9Y2X9 895 aa12.27□□□□□ -0.45
SMPD4-219ENST00000491128 TMCC2O75069 709 aa12.26□□□□□ -0.45
SMPD4-219ENST00000491128 DBHP09172 617 aa12.26□□□□□ -0.45
SMPD4-219ENST00000491128 GUCA1AP43080 201 aaPredicted RBP12.26□□□□□ -0.45
SMPD4-219ENST00000491128 ENDOGQ14249 297 aaKnown RBP12.26□□□□□ -0.45
SMPD4-219ENST00000491128 INAQ16352 499 aa12.26□□□□□ -0.45
SMPD4-219ENST00000491128 MOGQ16653 247 aa12.26□□□□□ -0.45
SMPD4-219ENST00000491128 PCK2Q16822 640 aa12.26□□□□□ -0.45
SMPD4-219ENST00000491128 CCDC58Q4VC31 144 aa12.26□□□□□ -0.45
SMPD4-219ENST00000491128 KCTD20Q7Z5Y7 419 aa12.26□□□□□ -0.45
SMPD4-219ENST00000491128 UBE2J2Q8N2K1 259 aa12.26□□□□□ -0.45
SMPD4-219ENST00000491128 A0A1B0GVC2 190 aa12.26□□□□□ -0.45
SMPD4-219ENST00000491128 ACTL6AO96019 429 aa12.26□□□□□ -0.45
SMPD4-219ENST00000491128 IL1AP01583 271 aa12.26□□□□□ -0.45
SMPD4-219ENST00000491128 HRGP04196 525 aa12.26□□□□□ -0.45
SMPD4-219ENST00000491128 FAM87AP0C7U9 286 aa12.26□□□□□ -0.45
SMPD4-219ENST00000491128 PRSS12P56730 875 aa12.26□□□□□ -0.45
SMPD4-219ENST00000491128 ROM1Q03395 351 aa12.26□□□□□ -0.45
SMPD4-219ENST00000491128 IDNKQ5T6J7 187 aa12.26□□□□□ -0.45
SMPD4-219ENST00000491128 MS4A15Q8N5U1 240 aa12.26□□□□□ -0.45
SMPD4-219ENST00000491128 ZNF433Q8N7K0 673 aaPredicted RBP12.26□□□□□ -0.45
SMPD4-219ENST00000491128 DNAAF1Q8NEP3 725 aa12.26□□□□□ -0.45
SMPD4-219ENST00000491128 RNF133Q8WVZ7 376 aa12.26□□□□□ -0.45
SMPD4-219ENST00000491128 DACH2Q96NX9 599 aa12.26□□□□□ -0.45
SMPD4-219ENST00000491128 TRIB1Q96RU8 372 aa12.26□□□□□ -0.45
SMPD4-219ENST00000491128 KCNN2Q9H2S1 579 aa12.26□□□□□ -0.45
SMPD4-219ENST00000491128 CCDC59Q9P031 241 aaKnown RBP12.26□□□□□ -0.45
SMPD4-219ENST00000491128 DAPK2Q9UIK4 370 aa12.26□□□□□ -0.45
SMPD4-219ENST00000491128 NCOA6Q14686 2063 aaPredicted RBP12.26□□□□□ -0.45
SMPD4-219ENST00000491128 F5H5K5 113 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 PHYHO14832 338 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 PAHP00439 452 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 MSR1P21757 451 aa12.25□□□□□ -0.45
SMPD4-219ENST00000491128 ASB18Q6ZVZ8 466 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms