RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 FNDC8Q8TC99 324 aa8.9□□□□□ -0.98
TTC28-207ENST00000490475 C11orf40Q8WZ69 217 aa8.9□□□□□ -0.98
TTC28-207ENST00000490475 ZNF75AQ96N20 296 aa8.9□□□□□ -0.98
TTC28-207ENST00000490475 FAM210AQ96ND0 272 aa8.9□□□□□ -0.98
TTC28-207ENST00000490475 SNX18Q96RF0 628 aa8.9□□□□□ -0.98
TTC28-207ENST00000490475 C19orf24Q9BVV8 132 aa8.9□□□□□ -0.98
TTC28-207ENST00000490475 MRPL37Q9BZE1 423 aaKnown RBP8.9□□□□□ -0.98
TTC28-207ENST00000490475 TRIM15Q9C019 465 aa8.9□□□□□ -0.98
TTC28-207ENST00000490475 RNF121Q9H920 327 aa8.9□□□□□ -0.98
TTC28-207ENST00000490475 CDH20Q9HBT6 801 aa8.9□□□□□ -0.98
TTC28-207ENST00000490475 NKIRAS2Q9NYR9 191 aa8.9□□□□□ -0.98
TTC28-207ENST00000490475 METRNQ9UJH8 293 aa8.9□□□□□ -0.98
TTC28-207ENST00000490475 SIGLEC7Q9Y286 467 aa8.9□□□□□ -0.98
TTC28-207ENST00000490475 U3KQV3 271 aa8.9□□□□□ -0.98
TTC28-207ENST00000490475 IGKV1D-43A0A0B4J1Z2 117 aa8.89□□□□□ -0.99
TTC28-207ENST00000490475 DHRS12A0PJE2 317 aa8.89□□□□□ -0.99
TTC28-207ENST00000490475 LRP5LA4QPB2 252 aa8.89□□□□□ -0.99
TTC28-207ENST00000490475 NPIPB13A6NJU9 1138 aa8.89□□□□□ -0.99
TTC28-207ENST00000490475 NPIPB4C9JG80 1138 aa8.89□□□□□ -0.99
TTC28-207ENST00000490475 H7C1C5 153 aa8.89□□□□□ -0.99
TTC28-207ENST00000490475 NDUFB2O95178 105 aa8.89□□□□□ -0.99
TTC28-207ENST00000490475 SLC2A10O95528 541 aa8.89□□□□□ -0.99
TTC28-207ENST00000490475 CST1P01037 141 aa8.89□□□□□ -0.99
TTC28-207ENST00000490475 CD14P08571 375 aa8.89□□□□□ -0.99
TTC28-207ENST00000490475 PATE4P0C8F1 98 aa8.89□□□□□ -0.99
TTC28-207ENST00000490475 KLF3P57682 345 aaPredicted RBP8.89□□□□□ -0.99
TTC28-207ENST00000490475 LCN6P62502 163 aa8.89□□□□□ -0.99
TTC28-207ENST00000490475 FMODQ06828 376 aa8.89□□□□□ -0.99
TTC28-207ENST00000490475 NKPD1Q17RQ9 610 aa8.89□□□□□ -0.99
TTC28-207ENST00000490475 ZNF770Q6IQ21 691 aaPredicted RBP8.89□□□□□ -0.99
TTC28-207ENST00000490475 C1orf94Q6P1W5 598 aa8.89□□□□□ -0.99
TTC28-207ENST00000490475 PGBD2Q6P3X8 592 aa8.89□□□□□ -0.99
TTC28-207ENST00000490475 SLC16A14Q7RTX9 510 aa8.89□□□□□ -0.99
TTC28-207ENST00000490475 SKA3Q8IX90 412 aa8.89□□□□□ -0.99
TTC28-207ENST00000490475 ICA1LQ8NDH6 482 aa8.89□□□□□ -0.99
TTC28-207ENST00000490475 CPEB3Q8NE35 698 aaKnown RBP8.89□□□□□ -0.99
TTC28-207ENST00000490475 SLC30A7Q8NEW0 376 aa8.89□□□□□ -0.99
TTC28-207ENST00000490475 OR9Q2Q8NGE9 314 aa8.89□□□□□ -0.99
TTC28-207ENST00000490475 FGFBP3Q8TAT2 258 aa8.89□□□□□ -0.99
TTC28-207ENST00000490475 ZNF519Q8TB69 540 aa8.89□□□□□ -0.99
TTC28-207ENST00000490475 GNPDA2Q8TDQ7 276 aa8.89□□□□□ -0.99
TTC28-207ENST00000490475 NSMAFQ92636 917 aa8.89□□□□□ -0.99
TTC28-207ENST00000490475 POP5Q969H6 163 aaKnown RBP8.89□□□□□ -0.99
TTC28-207ENST00000490475 SLCO4A1Q96BD0 722 aa8.89□□□□□ -0.99
TTC28-207ENST00000490475 NMD3Q96D46 503 aaKnown RBP8.89□□□□□ -0.99
TTC28-207ENST00000490475 MS4A3Q96HJ5 214 aa8.89□□□□□ -0.99
TTC28-207ENST00000490475 Q96M85 177 aa8.89□□□□□ -0.99
TTC28-207ENST00000490475 RBP7Q96R05 134 aa8.89□□□□□ -0.99
TTC28-207ENST00000490475 TPK1Q9H3S4 243 aa8.89□□□□□ -0.99
TTC28-207ENST00000490475 SMURF2Q9HAU4 748 aa8.89□□□□□ -0.99
TTC28-207ENST00000490475 KRCC1Q9NPI7 259 aaPredicted RBP8.89□□□□□ -0.99
TTC28-207ENST00000490475 C8orf4Q9NR00 106 aa8.89□□□□□ -0.99
TTC28-207ENST00000490475 TMEM38BQ9NVV0 291 aa8.89□□□□□ -0.99
TTC28-207ENST00000490475 GRHPRQ9UBQ7 328 aa8.89□□□□□ -0.99
TTC28-207ENST00000490475 DUSP13Q9UII6 198 aa8.89□□□□□ -0.99
TTC28-207ENST00000490475 IER3IP1Q9Y5U9 82 aa8.89□□□□□ -0.99
TTC28-207ENST00000490475 TCRBV3S1A0A5B6 114 aa8.88□□□□□ -0.99
TTC28-207ENST00000490475 A6NIZ1 184 aa8.88□□□□□ -0.99
TTC28-207ENST00000490475 HAX1O00165 279 aa8.88□□□□□ -0.99
TTC28-207ENST00000490475 IMPA2O14732 288 aa8.88□□□□□ -0.99
TTC28-207ENST00000490475 CCNB2O95067 398 aa8.88□□□□□ -0.99
TTC28-207ENST00000490475 BAG2O95816 211 aa8.88□□□□□ -0.99
TTC28-207ENST00000490475 IGHMP01871 453 aa8.88□□□□□ -0.99
TTC28-207ENST00000490475 ZNF250P15622 560 aa8.88□□□□□ -0.99
TTC28-207ENST00000490475 FPR3P25089 353 aa8.88□□□□□ -0.99
TTC28-207ENST00000490475 CDAP32320 146 aa8.88□□□□□ -0.99
TTC28-207ENST00000490475 APLNRP35414 380 aa8.88□□□□□ -0.99
TTC28-207ENST00000490475 IFNGR2P38484 337 aa8.88□□□□□ -0.99
TTC28-207ENST00000490475 GUCA1AP43080 201 aaPredicted RBP8.88□□□□□ -0.99
TTC28-207ENST00000490475 GSSP48637 474 aa8.88□□□□□ -0.99
TTC28-207ENST00000490475 RAP1BP61224 184 aa8.88□□□□□ -0.99
TTC28-207ENST00000490475 RAP1AP62834 184 aa8.88□□□□□ -0.99
TTC28-207ENST00000490475 CD47Q08722 323 aa8.88□□□□□ -0.99
TTC28-207ENST00000490475 CCNIQ14094 377 aa8.88□□□□□ -0.99
TTC28-207ENST00000490475 RAB39AQ14964 217 aa8.88□□□□□ -0.99
TTC28-207ENST00000490475 MICAQ29983 383 aa8.88□□□□□ -0.99
TTC28-207ENST00000490475 RFX4Q33E94 735 aa8.88□□□□□ -0.99
TTC28-207ENST00000490475 ELFN2Q5R3F8 820 aa8.88□□□□□ -0.99
TTC28-207ENST00000490475 THEM4Q5T1C6 240 aa8.88□□□□□ -0.99
TTC28-207ENST00000490475 SHQ1Q6PI26 577 aaKnown RBP8.88□□□□□ -0.99
TTC28-207ENST00000490475 SLC25A47Q6Q0C1 308 aa8.88□□□□□ -0.99
TTC28-207ENST00000490475 SMARCD3Q6STE5 483 aa8.88□□□□□ -0.99
TTC28-207ENST00000490475 DPY19L2P2Q6ZN68 376 aa8.88□□□□□ -0.99
TTC28-207ENST00000490475 TMEM179BQ7Z7N9 219 aa8.88□□□□□ -0.99
TTC28-207ENST00000490475 ZCCHC24Q8N2G6 241 aaKnown RBP8.88□□□□□ -0.99
TTC28-207ENST00000490475 PQLC1Q8N2U9 271 aa8.88□□□□□ -0.99
TTC28-207ENST00000490475 NOXO1Q8NFA2 376 aa8.88□□□□□ -0.99
TTC28-207ENST00000490475 OR51F2Q8NH61 342 aa8.88□□□□□ -0.99
TTC28-207ENST00000490475 SYNPRQ8TBG9 265 aa8.88□□□□□ -0.99
TTC28-207ENST00000490475 RASD2Q96D21 266 aa8.88□□□□□ -0.99
TTC28-207ENST00000490475 RAB39BQ96DA2 213 aa8.88□□□□□ -0.99
TTC28-207ENST00000490475 DGCR14Q96DF8 476 aaKnown RBP8.88□□□□□ -0.99
TTC28-207ENST00000490475 DUS3LQ96G46 650 aaKnown RBP8.88□□□□□ -0.99
TTC28-207ENST00000490475 SAMD8Q96LT4 415 aa8.88□□□□□ -0.99
TTC28-207ENST00000490475 SYT3Q9BQG1 590 aa8.88□□□□□ -0.99
TTC28-207ENST00000490475 REEP1Q9H902 201 aa8.88□□□□□ -0.99
TTC28-207ENST00000490475 NRIP3Q9NQ35 241 aa8.88□□□□□ -0.99
TTC28-207ENST00000490475 HINT3Q9NQE9 182 aaKnown RBP8.88□□□□□ -0.99
TTC28-207ENST00000490475 ZNF224Q9NZL3 707 aa8.88□□□□□ -0.99
TTC28-207ENST00000490475 EIF3KQ9UBQ5 218 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms