RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 ZNF878C9JN71 531 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 AIPO00170 330 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 TBX1O43435 398 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 GMFGO60234 142 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 ZNF354AO60765 605 aaPredicted RBP5.67□□□□□ -1.5
SF3A3-208ENST00000489537 SLC43A1O75387 559 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 UPK3AO75631 287 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 AKR7A3O95154 331 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 ZFPL1O95159 310 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 UBL3O95164 117 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 ABHD16AO95870 558 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 ECDO95905 644 aaPredicted RBP5.67□□□□□ -1.5
SF3A3-208ENST00000489537 ACTL6AO96019 429 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 LALBAP00709 142 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 PLGP00747 810 aaPredicted RBP5.67□□□□□ -1.5
SF3A3-208ENST00000489537 HLA-DQB1P01920 261 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 ADRA2AP08913 450 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 SPARCP09486 303 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 H2BFMP0C1H6 154 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 GSTT2BP0CG30 244 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 CCL3P10147 92 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 LIPCP11150 499 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 SLC2A2P11168 524 aaPredicted RBP5.67□□□□□ -1.5
SF3A3-208ENST00000489537 ITGA3P26006 1051 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 EIF2S3P41091 472 aaKnown RBP5.67□□□□□ -1.5
SF3A3-208ENST00000489537 CSNK1A1P48729 337 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 PITPNBP48739 271 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 ZNF133P52736 654 aaPredicted RBP5.67□□□□□ -1.5
SF3A3-208ENST00000489537 SUCLG1P53597 346 aaKnown RBP5.67□□□□□ -1.5
SF3A3-208ENST00000489537 CARD18P57730 90 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 GABREP78334 506 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 SSBP1Q04837 148 aaKnown RBP5.67□□□□□ -1.5
SF3A3-208ENST00000489537 COL9A2Q14055 689 aaPredicted RBP5.67□□□□□ -1.5
SF3A3-208ENST00000489537 IL18Q14116 193 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 EIF2B1Q14232 305 aaKnown RBP5.67□□□□□ -1.5
SF3A3-208ENST00000489537 TAF13Q15543 124 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 MEP1BQ16820 701 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 HYAL4Q2M3T9 481 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 SOWAHCQ53LP3 525 aaPredicted RBP5.67□□□□□ -1.5
SF3A3-208ENST00000489537 PYDC2Q56P42 97 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 UBE2NLQ5JXB2 153 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 PRAMEF20Q5VT98 475 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 C1QL3Q5VWW1 255 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 VASNQ6EMK4 673 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 B3GLCTQ6Y288 498 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 CHMP1BQ7LBR1 199 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 TMPRSS7Q7RTY8 843 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 TIPARPQ7Z3E1 657 aaKnown RBP5.67□□□□□ -1.5
SF3A3-208ENST00000489537 ABHD12BQ7Z5M8 362 aaPredicted RBP5.67□□□□□ -1.5
SF3A3-208ENST00000489537 GPAT4Q86UL3 456 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 SLC22A16Q86VW1 577 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 ZNF227Q86WZ6 799 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 ZFP41Q8N8Y5 198 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 GJC3Q8NFK1 279 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 OR51L1Q8NGJ5 315 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 OR6N1Q8NGY5 312 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 POC1BQ8TC44 478 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 RNF133Q8WVZ7 376 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 S100A16Q96FQ6 103 aaKnown RBP5.67□□□□□ -1.5
SF3A3-208ENST00000489537 ARL5BQ96KC2 179 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 C4orf45Q96LM5 186 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 JSRP1Q96MG2 331 aaPredicted RBP5.67□□□□□ -1.5
SF3A3-208ENST00000489537 DERL3Q96Q80 235 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 ATF6BQ99941 703 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 ABHD6Q9BV23 337 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 SRRQ9GZT4 340 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 RERGLQ9H628 205 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 AKIRIN1Q9H9L7 192 aaPredicted RBP5.67□□□□□ -1.5
SF3A3-208ENST00000489537 RNF122Q9H9V4 155 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 ELOVL3Q9HB03 270 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 GP6Q9HCN6 339 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 ABCB9Q9NP78 766 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 DIABLOQ9NR28 239 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 ACOXLQ9NUZ1 547 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 GLTPQ9NZD2 209 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 COMMD3Q9UBI1 195 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 MRM2Q9UI43 246 aaKnown RBP5.67□□□□□ -1.5
SF3A3-208ENST00000489537 FBXL2Q9UKC9 423 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 MCTS1Q9ULC4 181 aaKnown RBP5.67□□□□□ -1.5
SF3A3-208ENST00000489537 DHDHQ9UQ10 334 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 CAMK2AQ9UQM7 478 aa5.67□□□□□ -1.5
SF3A3-208ENST00000489537 COA3Q9Y2R0 106 aaPredicted RBP5.67□□□□□ -1.5
SF3A3-208ENST00000489537 TMEM269A0A1B0GVZ9 245 aa5.66□□□□□ -1.5
SF3A3-208ENST00000489537 NAP1L6A6NFF2 107 aa5.66□□□□□ -1.5
SF3A3-208ENST00000489537 TVP23AA6NH52 213 aa5.66□□□□□ -1.5
SF3A3-208ENST00000489537 OR4C45A6NMZ5 311 aa5.66□□□□□ -1.5
SF3A3-208ENST00000489537 IFITM5A6NNB3 132 aa5.66□□□□□ -1.5
SF3A3-208ENST00000489537 CTDSPLO15194 276 aa5.66□□□□□ -1.5
SF3A3-208ENST00000489537 TRAF3IP2O43734 574 aaPredicted RBP5.66□□□□□ -1.5
SF3A3-208ENST00000489537 ZIC3O60481 467 aa5.66□□□□□ -1.5
SF3A3-208ENST00000489537 EIF4EBP3O60516 100 aaPredicted RBP5.66□□□□□ -1.5
SF3A3-208ENST00000489537 MTRF1O75570 445 aaKnown RBP5.66□□□□□ -1.5
SF3A3-208ENST00000489537 SNAPC5O75971 98 aa5.66□□□□□ -1.5
SF3A3-208ENST00000489537 FARS2O95363 451 aaKnown RBP5.66□□□□□ -1.5
SF3A3-208ENST00000489537 SYNGR4O95473 234 aa5.66□□□□□ -1.5
SF3A3-208ENST00000489537 HPNP05981 417 aa5.66□□□□□ -1.5
SF3A3-208ENST00000489537 TRAPPC2P0DI81 140 aa5.66□□□□□ -1.5
SF3A3-208ENST00000489537 TRAPPC2BP0DI82 140 aa5.66□□□□□ -1.5
SF3A3-208ENST00000489537 PGA4P0DJD7 388 aa5.66□□□□□ -1.5
SF3A3-208ENST00000489537 PGA3P0DJD8 388 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms