RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 ARHGDIAP52565 204 aa10.15□□□□□ -0.78
CCHCR1-215ENST00000488920 GYS2P54840 703 aa10.15□□□□□ -0.78
CCHCR1-215ENST00000488920 TEKQ02763 1124 aa10.15□□□□□ -0.78
CCHCR1-215ENST00000488920 KRR1Q13601 381 aaKnown RBP10.15□□□□□ -0.78
CCHCR1-215ENST00000488920 ARL9Q6T311 187 aa10.15□□□□□ -0.78
CCHCR1-215ENST00000488920 CCL17Q92583 94 aa10.15□□□□□ -0.78
CCHCR1-215ENST00000488920 TMEM186Q96B77 213 aa10.15□□□□□ -0.78
CCHCR1-215ENST00000488920 PYURFQ96I23 114 aa10.15□□□□□ -0.78
CCHCR1-215ENST00000488920 RSRC1Q96IZ7 334 aaKnown RBP10.15□□□□□ -0.78
CCHCR1-215ENST00000488920 LRRC37BQ96QE4 947 aa10.15□□□□□ -0.78
CCHCR1-215ENST00000488920 GPA33Q99795 319 aa10.15□□□□□ -0.78
CCHCR1-215ENST00000488920 SYT4Q9H2B2 425 aa10.15□□□□□ -0.78
CCHCR1-215ENST00000488920 GORASP2Q9H8Y8 452 aa10.15□□□□□ -0.78
CCHCR1-215ENST00000488920 SAP30LQ9HAJ7 183 aa10.15□□□□□ -0.78
CCHCR1-215ENST00000488920 ELOVL3Q9HB03 270 aa10.15□□□□□ -0.78
CCHCR1-215ENST00000488920 NRIP3Q9NQ35 241 aa10.15□□□□□ -0.78
CCHCR1-215ENST00000488920 SAMD4AQ9UPU9 718 aaKnown RBP10.15□□□□□ -0.78
CCHCR1-215ENST00000488920 AURKCQ9UQB9 309 aa10.15□□□□□ -0.78
CCHCR1-215ENST00000488920 COA3Q9Y2R0 106 aaPredicted RBP10.15□□□□□ -0.78
CCHCR1-215ENST00000488920 SGCEO43556 437 aa10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 DOK2O60496 412 aa10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 ICMTO60725 284 aa10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 KHDRBS3O75525 346 aaKnown RBP10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 ABHD16AO95870 558 aa10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 SDHAP31040 664 aa10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 CDKN2AP42771 156 aaKnown RBP10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 HTR5AP47898 357 aa10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 FXYD6P3P58550 94 aa10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 SCRN3Q0VDG4 424 aa10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 PSG7Q13046 419 aa10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 HNRNPA0Q13151 305 aaKnown RBP10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 HFEQ30201 348 aa10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 SPRNQ5BIV9 151 aa10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 GPR139Q6DWJ6 353 aa10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 FAHD2BQ6P2I3 314 aaPredicted RBP10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 DPY19L2P2Q6ZN68 376 aa10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 PTCHD4Q6ZW05 846 aa10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 ZNF771Q7L3S4 317 aaPredicted RBP10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 VASH1Q7L8A9 365 aaPredicted RBP10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 GLB1L2Q8IW92 636 aa10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 C1orf174Q8IYL3 243 aa10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 OR51F2Q8NH61 342 aa10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 SLC7A6Q92536 515 aa10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 FAHD2AQ96GK7 314 aa10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 DHRS1Q96LJ7 313 aa10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 CDRT15Q96T59 188 aa10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 FUZQ9BT04 418 aa10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 C19orf24Q9BVV8 132 aa10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 EGLN1Q9GZT9 426 aa10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 NUAK2Q9H093 628 aa10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 NSRP1Q9H0G5 558 aaKnown RBP10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 POFUT1Q9H488 388 aa10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 ZNF665Q9H7R5 613 aa10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 MSL2Q9HCI7 577 aa10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 CYSLTR2Q9NS75 346 aa10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 KLHL21Q9UJP4 597 aa10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 NDRG4Q9ULP0 352 aaKnown RBP10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 GRIP1Q9Y3R0 1128 aa10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 WIPI2Q9Y4P8 454 aa10.14□□□□□ -0.79
CCHCR1-215ENST00000488920 CLDN25C9JDP6 229 aa10.13□□□□□ -0.79
CCHCR1-215ENST00000488920 TIMM8AO60220 97 aaPredicted RBP10.13□□□□□ -0.79
CCHCR1-215ENST00000488920 GADD45GO95257 159 aa10.13□□□□□ -0.79
CCHCR1-215ENST00000488920 GPANK1O95872 356 aa10.13□□□□□ -0.79
CCHCR1-215ENST00000488920 COX5BP10606 129 aa10.13□□□□□ -0.79
CCHCR1-215ENST00000488920 ITGA2P17301 1181 aa10.13□□□□□ -0.79
CCHCR1-215ENST00000488920 PCMT1P22061 227 aa10.13□□□□□ -0.79
CCHCR1-215ENST00000488920 RBMXP38159 391 aaKnown RBP10.13□□□□□ -0.79
CCHCR1-215ENST00000488920 LIPAP38571 399 aa10.13□□□□□ -0.79
CCHCR1-215ENST00000488920 CENPAP49450 140 aa10.13□□□□□ -0.79
CCHCR1-215ENST00000488920 RPS6KA3P51812 740 aa10.13□□□□□ -0.79
CCHCR1-215ENST00000488920 SMIM11AP58511 58 aa10.13□□□□□ -0.79
CCHCR1-215ENST00000488920 SPIBQ01892 262 aa10.13□□□□□ -0.79
CCHCR1-215ENST00000488920 DBPQ10586 325 aaPredicted RBP10.13□□□□□ -0.79
CCHCR1-215ENST00000488920 FAM209AQ5JX71 171 aa10.13□□□□□ -0.79
CCHCR1-215ENST00000488920 LIPNQ5VXI9 398 aa10.13□□□□□ -0.79
CCHCR1-215ENST00000488920 ACSM5Q6NUN0 579 aa10.13□□□□□ -0.79
CCHCR1-215ENST00000488920 C1orf94Q6P1W5 598 aa10.13□□□□□ -0.79
CCHCR1-215ENST00000488920 SMARCD3Q6STE5 483 aa10.13□□□□□ -0.79
CCHCR1-215ENST00000488920 ZER1Q7Z7L7 766 aa10.13□□□□□ -0.79
CCHCR1-215ENST00000488920 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.13□□□□□ -0.79
CCHCR1-215ENST00000488920 RAB1CQ92928 201 aa10.13□□□□□ -0.79
CCHCR1-215ENST00000488920 CMBLQ96DG6 245 aa10.13□□□□□ -0.79
CCHCR1-215ENST00000488920 ELMOD3Q96FG2 381 aa10.13□□□□□ -0.79
CCHCR1-215ENST00000488920 TIMD4Q96H15 378 aa10.13□□□□□ -0.79
CCHCR1-215ENST00000488920 TSSK2Q96PF2 358 aa10.13□□□□□ -0.79
CCHCR1-215ENST00000488920 GPX7Q96SL4 187 aaPredicted RBP10.13□□□□□ -0.79
CCHCR1-215ENST00000488920 WACQ9BTA9 647 aa10.13□□□□□ -0.79
CCHCR1-215ENST00000488920 METTL17Q9H7H0 456 aaPredicted RBP10.13□□□□□ -0.79
CCHCR1-215ENST00000488920 KRCC1Q9NPI7 259 aaPredicted RBP10.13□□□□□ -0.79
CCHCR1-215ENST00000488920 ARL8BQ9NVJ2 186 aa10.13□□□□□ -0.79
CCHCR1-215ENST00000488920 TBCCD1Q9NVR7 557 aa10.13□□□□□ -0.79
CCHCR1-215ENST00000488920 PLEK2Q9NYT0 353 aa10.13□□□□□ -0.79
CCHCR1-215ENST00000488920 VSX1Q9NZR4 365 aaPredicted RBP10.13□□□□□ -0.79
CCHCR1-215ENST00000488920 ASH2LQ9UBL3 628 aa10.13□□□□□ -0.79
CCHCR1-215ENST00000488920 CD300AQ9UGN4 299 aa10.13□□□□□ -0.79
CCHCR1-215ENST00000488920 ZDHHC8Q9ULC8 765 aa10.13□□□□□ -0.79
CCHCR1-215ENST00000488920 STARD10Q9Y365 291 aa10.13□□□□□ -0.79
CCHCR1-215ENST00000488920 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.12□□□□□ -0.794e-10■■■■■ 41.7
CCHCR1-215ENST00000488920 H3BSA7 217 aa10.12□□□□□ -0.79
CCHCR1-215ENST00000488920 RER1O15258 196 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms