RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 RPS27P42677 84 aaKnown RBP11.26□□□□□ -0.61
NELFE-209ENST00000488426 RORCP51449 518 aa11.26□□□□□ -0.61
NELFE-209ENST00000488426 EIF2B1Q14232 305 aaKnown RBP11.26□□□□□ -0.61
NELFE-209ENST00000488426 MEP1BQ16820 701 aa11.26□□□□□ -0.61
NELFE-209ENST00000488426 PAMR1Q6UXH9 720 aa11.26□□□□□ -0.61
NELFE-209ENST00000488426 ZNF679Q8IYX0 411 aa11.26□□□□□ -0.61
NELFE-209ENST00000488426 ZIC4Q8N9L1 334 aa11.26□□□□□ -0.61
NELFE-209ENST00000488426 GALNT11Q8NCW6 608 aa11.26□□□□□ -0.61
NELFE-209ENST00000488426 OR52N5Q8NH56 324 aa11.26□□□□□ -0.61
NELFE-209ENST00000488426 NSMAFQ92636 917 aa11.26□□□□□ -0.61
NELFE-209ENST00000488426 ABTB1Q969K4 478 aaPredicted RBP11.26□□□□□ -0.61
NELFE-209ENST00000488426 ABHD6Q9BV23 337 aa11.26□□□□□ -0.61
NELFE-209ENST00000488426 CDADC1Q9BWV3 514 aa11.26□□□□□ -0.61
NELFE-209ENST00000488426 ZDHHC11Q9H8X9 412 aa11.26□□□□□ -0.61
NELFE-209ENST00000488426 FAIMQ9NVQ4 179 aa11.26□□□□□ -0.61
NELFE-209ENST00000488426 MAST4O15021 2626 aa11.26□□□□□ -0.61
NELFE-209ENST00000488426 CD8B2A6NJW9 211 aa11.25□□□□□ -0.61
NELFE-209ENST00000488426 PSMD9O00233 223 aa11.25□□□□□ -0.61
NELFE-209ENST00000488426 CDRT1O95170 752 aa11.25□□□□□ -0.61
NELFE-209ENST00000488426 MPZL1O95297 269 aa11.25□□□□□ -0.61
NELFE-209ENST00000488426 QDPRP09417 244 aa11.25□□□□□ -0.61
NELFE-209ENST00000488426 CD8BP10966 210 aa11.25□□□□□ -0.61
NELFE-209ENST00000488426 PSMB10P40306 273 aa11.25□□□□□ -0.61
NELFE-209ENST00000488426 KCNMB1Q16558 191 aa11.25□□□□□ -0.61
NELFE-209ENST00000488426 C10orf128Q5T292 105 aa11.25□□□□□ -0.61
NELFE-209ENST00000488426 HIST2H2BCQ6DN03 193 aa11.25□□□□□ -0.61
NELFE-209ENST00000488426 FDX2Q6P4F2 183 aa11.25□□□□□ -0.61
NELFE-209ENST00000488426 FCRLAQ7L513 359 aa11.25□□□□□ -0.61
NELFE-209ENST00000488426 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.25□□□□□ -0.61
NELFE-209ENST00000488426 OR6Q1Q8NGQ2 317 aa11.25□□□□□ -0.61
NELFE-209ENST00000488426 OR6N1Q8NGY5 312 aa11.25□□□□□ -0.61
NELFE-209ENST00000488426 NEIL3Q8TAT5 605 aa11.25□□□□□ -0.61
NELFE-209ENST00000488426 ABHD4Q8TB40 342 aa11.25□□□□□ -0.61
NELFE-209ENST00000488426 S100ZQ8WXG8 99 aa11.25□□□□□ -0.61
NELFE-209ENST00000488426 C11orf40Q8WZ69 217 aa11.25□□□□□ -0.61
NELFE-209ENST00000488426 RNF166Q96A37 237 aaPredicted RBP11.25□□□□□ -0.61
NELFE-209ENST00000488426 SLC25A46Q96AG3 418 aa11.25□□□□□ -0.61
NELFE-209ENST00000488426 DCLRE1CQ96SD1 692 aaKnown RBP11.25□□□□□ -0.61
NELFE-209ENST00000488426 AMELYQ99218 206 aa11.25□□□□□ -0.61
NELFE-209ENST00000488426 MROQ9BYG7 248 aa11.25□□□□□ -0.61
NELFE-209ENST00000488426 SLCO1C1Q9NYB5 712 aa11.25□□□□□ -0.61
NELFE-209ENST00000488426 ING1Q9UK53 422 aaPredicted RBP11.25□□□□□ -0.61
NELFE-209ENST00000488426 FLVCR1Q9Y5Y0 555 aa11.25□□□□□ -0.61
NELFE-209ENST00000488426 DIDO1Q9BTC0 2240 aaKnown RBP11.25□□□□□ -0.61
NELFE-209ENST00000488426 A0A075B6Q4 140 aa11.25□□□□□ -0.61
NELFE-209ENST00000488426 A0A1W2PPL8 197 aa11.25□□□□□ -0.61
NELFE-209ENST00000488426 ZNF254O75437 659 aa11.25□□□□□ -0.61
NELFE-209ENST00000488426 GATBO75879 557 aaKnown RBP11.25□□□□□ -0.61
NELFE-209ENST00000488426 SDC2P34741 201 aa11.25□□□□□ -0.61
NELFE-209ENST00000488426 ALKBH1Q13686 389 aaKnown RBP11.25□□□□□ -0.61
NELFE-209ENST00000488426 LRFN4Q6PJG9 635 aa11.25□□□□□ -0.61
NELFE-209ENST00000488426 DEGS2Q6QHC5 323 aa11.25□□□□□ -0.61
NELFE-209ENST00000488426 KRT77Q7Z794 578 aa11.25□□□□□ -0.61
NELFE-209ENST00000488426 C20orf196Q8IYI0 205 aa11.25□□□□□ -0.61
NELFE-209ENST00000488426 PRR7Q8TB68 274 aa11.25□□□□□ -0.61
NELFE-209ENST00000488426 ST7LQ8TDW4 575 aa11.25□□□□□ -0.61
NELFE-209ENST00000488426 ROBO4Q8WZ75 1007 aa11.25□□□□□ -0.61
NELFE-209ENST00000488426 PHYHIPQ92561 330 aa11.25□□□□□ -0.61
NELFE-209ENST00000488426 SNTG1Q9NSN8 517 aa11.25□□□□□ -0.61
NELFE-209ENST00000488426 FOXD3Q9UJU5 478 aaPredicted RBP11.25□□□□□ -0.61
NELFE-209ENST00000488426 IGKV3D-15A0A087WSY6 115 aa11.24□□□□□ -0.61
NELFE-209ENST00000488426 TRGV5A0A0B4J1U4 118 aa11.24□□□□□ -0.61
NELFE-209ENST00000488426 SLC43A1O75387 559 aa11.24□□□□□ -0.61
NELFE-209ENST00000488426 RPP14O95059 124 aaKnown RBP11.24□□□□□ -0.61
NELFE-209ENST00000488426 SYNGR4O95473 234 aa11.24□□□□□ -0.61
NELFE-209ENST00000488426 OPRL1P41146 370 aa11.24□□□□□ -0.61
NELFE-209ENST00000488426 MTNR1BP49286 362 aa11.24□□□□□ -0.61
NELFE-209ENST00000488426 RIDAP52758 137 aaKnown RBP11.24□□□□□ -0.61
NELFE-209ENST00000488426 NANOS3P60323 173 aaKnown RBP11.24□□□□□ -0.61
NELFE-209ENST00000488426 RASGEF1BQ0VAM2 473 aa11.24□□□□□ -0.61
NELFE-209ENST00000488426 ACSM3Q53FZ2 586 aa11.24□□□□□ -0.61
NELFE-209ENST00000488426 YIF1BQ5BJH7 314 aa11.24□□□□□ -0.61
NELFE-209ENST00000488426 ZNF544Q6NX49 715 aa11.24□□□□□ -0.61
NELFE-209ENST00000488426 TMEM53Q6P2H8 277 aa11.24□□□□□ -0.61
NELFE-209ENST00000488426 LRRN1Q6UXK5 716 aa11.24□□□□□ -0.61
NELFE-209ENST00000488426 FOXL2NBQ6ZUU3 175 aa11.24□□□□□ -0.61
NELFE-209ENST00000488426 DCXRQ7Z4W1 244 aa11.24□□□□□ -0.61
NELFE-209ENST00000488426 RNF128Q8TEB7 428 aa11.24□□□□□ -0.61
NELFE-209ENST00000488426 TMEM45BQ96B21 275 aa11.24□□□□□ -0.61
NELFE-209ENST00000488426 ZNF845Q96IR2 970 aaPredicted RBP11.24□□□□□ -0.61
NELFE-209ENST00000488426 PSMG3-AS1Q96PY0 264 aa11.24□□□□□ -0.61
NELFE-209ENST00000488426 TAAR6Q96RI8 345 aa11.24□□□□□ -0.61
NELFE-209ENST00000488426 ELOVL3Q9HB03 270 aa11.24□□□□□ -0.61
NELFE-209ENST00000488426 HMG20AQ9NP66 347 aa11.24□□□□□ -0.61
NELFE-209ENST00000488426 CRNNQ9UBG3 495 aaPredicted RBP11.24□□□□□ -0.61
NELFE-209ENST00000488426 CYB5R1Q9UHQ9 305 aa11.24□□□□□ -0.61
NELFE-209ENST00000488426 MCTS1Q9ULC4 181 aaKnown RBP11.24□□□□□ -0.61
NELFE-209ENST00000488426 ZNF281Q9Y2X9 895 aa11.24□□□□□ -0.61
NELFE-209ENST00000488426 UGT2A1Q9Y4X1 527 aa11.24□□□□□ -0.61
NELFE-209ENST00000488426 CRYBG3Q68DQ2 2970 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 ARPC4-TTLL3A0A0A6YYG9 625 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 TMEM212A6NML5 194 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 CLDN25C9JDP6 229 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 GPR171O14626 319 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 CASKO14936 926 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 SELENOPP49908 381 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 CCR9P51686 369 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 BMXP51813 675 aa11.23□□□□□ -0.61
NELFE-209ENST00000488426 DCTN2Q13561 401 aaKnown RBP11.23□□□□□ -0.61
NELFE-209ENST00000488426 INSL4Q14641 139 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms