RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 SAV1Q9H4B6 383 aaPredicted RBP1.13□□□□□ -2.23
SMC4-220ENST00000488017 ZNF586Q9NXT0 402 aa1.13□□□□□ -2.23
SMC4-220ENST00000488017 SLC2A8Q9NY64 477 aa1.13□□□□□ -2.23
SMC4-220ENST00000488017 ZNF229Q9UJW7 825 aa1.13□□□□□ -2.23
SMC4-220ENST00000488017 NUP50Q9UKX7 468 aa1.13□□□□□ -2.23
SMC4-220ENST00000488017 STARD10Q9Y365 291 aa1.13□□□□□ -2.23
SMC4-220ENST00000488017 GOLT1BQ9Y3E0 138 aa1.13□□□□□ -2.23
SMC4-220ENST00000488017 TENM1Q9UKZ4 2725 aa1.13□□□□□ -2.23
SMC4-220ENST00000488017 ADAMTS13Q76LX8 1427 aa1.13□□□□□ -2.23
SMC4-220ENST00000488017 YEATS2Q9ULM3 1422 aa1.13□□□□□ -2.23
SMC4-220ENST00000488017 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.12□□□□□ -2.23
SMC4-220ENST00000488017 IGLV1-50A0A075B6I6 118 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 TMEM223A0PJW6 202 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 SMCO2A6NFE2 343 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 VGLL3A8MV65 326 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 L7N2F9 121 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 CDC7O00311 574 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 RAB29O14966 203 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 GCM2O75603 506 aaPredicted RBP1.12□□□□□ -2.23
SMC4-220ENST00000488017 CCNKO75909 580 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 SERPINA5P05154 406 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 ANXA5P08758 320 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 OR56A5P0C7T3 313 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 UBTFL6P0CB48 400 aaPredicted RBP1.12□□□□□ -2.23
SMC4-220ENST00000488017 OR5H8P0DN80 308 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 RAB3BP20337 219 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 GPX4P36969 197 aaPredicted RBP1.12□□□□□ -2.23
SMC4-220ENST00000488017 CEACAM3P40198 252 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 CX3CR1P49238 355 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 TMED10P49755 219 aaKnown RBP1.12□□□□□ -2.23
SMC4-220ENST00000488017 MRPL23Q16540 153 aaKnown RBP1.12□□□□□ -2.23
SMC4-220ENST00000488017 SMUG1Q53HV7 270 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 RAET1LQ5VY80 246 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 SLC22A9Q8IVM8 553 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 OSR2Q8N2R0 312 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 OTUD6BQ8N6M0 293 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 PRELID2Q8N945 189 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 NECAB1Q8N987 351 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 GATSQ8NAP1 163 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 NECAP1Q8NC96 275 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 OR8U1Q8NH10 309 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 COQ8AQ8NI60 647 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 KCNG3Q8TAE7 436 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 GPR151Q8TDV0 419 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 RNF139Q8WU17 664 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 C15orf40Q8WUR7 153 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 ZNF606Q8WXB4 792 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 L3HYPDHQ96EM0 354 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 NARS2Q96I59 477 aaKnown RBP1.12□□□□□ -2.23
SMC4-220ENST00000488017 CNDP1Q96KN2 507 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 ZNF382Q96SR6 550 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 RNF5Q99942 180 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 NEUROG2Q9H2A3 272 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 OR51M1Q9H341 326 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 ETNK2Q9NVF9 386 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 COX16Q9P0S2 106 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 CTSFQ9UBX1 484 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 TSSC4Q9Y5U2 329 aaPredicted RBP1.12□□□□□ -2.23
SMC4-220ENST00000488017 MAPK8IP3Q9UPT6 1336 aa1.12□□□□□ -2.23
SMC4-220ENST00000488017 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.11□□□□□ -2.23
SMC4-220ENST00000488017 SHROOM3Q8TF72 1996 aa1.11□□□□□ -2.23
SMC4-220ENST00000488017 IGLV1-36A0A0B4J1U3 117 aa1.11□□□□□ -2.23
SMC4-220ENST00000488017 GLYATL1P3A0A0U1RQE8 302 aa1.11□□□□□ -2.23
SMC4-220ENST00000488017 A0A0U1RQV1 116 aa1.11□□□□□ -2.23
SMC4-220ENST00000488017 NUPL2O15504 423 aaKnown RBP1.11□□□□□ -2.23
SMC4-220ENST00000488017 NDUFB10O96000 172 aa1.11□□□□□ -2.23
SMC4-220ENST00000488017 EIF4EP06730 217 aaKnown RBP1.11□□□□□ -2.23
SMC4-220ENST00000488017 CRYGBP07316 175 aa1.11□□□□□ -2.23
SMC4-220ENST00000488017 UQCRFS1P1P0C7P4 283 aa1.11□□□□□ -2.23
SMC4-220ENST00000488017 ZNF806P0C7X5 589 aa1.11□□□□□ -2.23
SMC4-220ENST00000488017 CCNB1P14635 433 aa1.11□□□□□ -2.23
SMC4-220ENST00000488017 TNNI1P19237 187 aa1.11□□□□□ -2.23
SMC4-220ENST00000488017 PTMSP20962 102 aa1.11□□□□□ -2.23
SMC4-220ENST00000488017 DTYMKP23919 212 aa1.11□□□□□ -2.23
SMC4-220ENST00000488017 NAA10P41227 235 aaPredicted RBP1.11□□□□□ -2.23
SMC4-220ENST00000488017 PRMT2P55345 433 aa1.11□□□□□ -2.23
SMC4-220ENST00000488017 ZNF816Q0VGE8 651 aaPredicted RBP1.11□□□□□ -2.23
SMC4-220ENST00000488017 CDC20Q12834 499 aa1.11□□□□□ -2.23
SMC4-220ENST00000488017 CDH17Q12864 832 aa1.11□□□□□ -2.23
SMC4-220ENST00000488017 IRF4Q15306 451 aa1.11□□□□□ -2.23
SMC4-220ENST00000488017 ORMDL2Q53FV1 153 aa1.11□□□□□ -2.23
SMC4-220ENST00000488017 SOHLH1Q5JUK2 328 aa1.11□□□□□ -2.23
SMC4-220ENST00000488017 PPM1LQ5SGD2 360 aa1.11□□□□□ -2.23
SMC4-220ENST00000488017 THEM4Q5T1C6 240 aa1.11□□□□□ -2.23
SMC4-220ENST00000488017 TMEM107Q6UX40 140 aa1.11□□□□□ -2.23
SMC4-220ENST00000488017 FAM228AQ86W67 206 aa1.11□□□□□ -2.23
SMC4-220ENST00000488017 CDR2LQ86X02 465 aaPredicted RBP1.11□□□□□ -2.23
SMC4-220ENST00000488017 METTL13Q8N6R0 699 aa1.11□□□□□ -2.23
SMC4-220ENST00000488017 SPATA4Q8NEY3 305 aa1.11□□□□□ -2.23
SMC4-220ENST00000488017 OR4K5Q8NGD3 323 aa1.11□□□□□ -2.23
SMC4-220ENST00000488017 OR10AD1Q8NGE0 317 aa1.11□□□□□ -2.23
SMC4-220ENST00000488017 AKR7LQ8NHP1 331 aa1.11□□□□□ -2.23
SMC4-220ENST00000488017 CIRBP-AS1Q8TBR5 109 aa1.11□□□□□ -2.23
SMC4-220ENST00000488017 PIFOQ8TCI5 191 aa1.11□□□□□ -2.23
SMC4-220ENST00000488017 SHC3Q92529 594 aa1.11□□□□□ -2.23
SMC4-220ENST00000488017 MRGPRFQ96AM1 343 aa1.11□□□□□ -2.23
SMC4-220ENST00000488017 FLYWCH2Q96CP2 140 aaKnown RBP1.11□□□□□ -2.23
SMC4-220ENST00000488017 TIMM17AQ99595 171 aa1.11□□□□□ -2.23
SMC4-220ENST00000488017 CENPKQ9BS16 269 aa1.11□□□□□ -2.23
SMC4-220ENST00000488017 RACGAP1Q9H0H5 632 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms