RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 EIF4EP06730 217 aaKnown RBP10.01□□□□□ -0.81
HDAC6-228ENST00000486227 GNRHRP30968 328 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 SDHAP31040 664 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 TRAPPC6BQ86SZ2 158 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 SLC25A32Q9H2D1 315 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 CYSLTR2Q9NS75 346 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 SCN3AQ9NY46 2000 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 FRG2CA6NGY1 282 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 NPIPB8E9PQR5 432 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 SOX18P35713 384 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 ARL6IP1Q15041 203 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 C3orf33Q6P1S2 294 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 LANCL3Q6ZV70 420 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 ARIH2OSQ8N7S6 290 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 ZC3HAV1LQ96H79 300 aaKnown RBP10.01□□□□□ -0.81
HDAC6-228ENST00000486227 C12orf57Q99622 126 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 VRK1Q99986 396 aaPredicted RBP10.01□□□□□ -0.81
HDAC6-228ENST00000486227 WWTR1Q9GZV5 400 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 PLEKHJ1Q9NW61 149 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 HIF3AQ9Y2N7 669 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 CT62P0C5K7 136 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 SLC2A1P11166 492 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 FKBP2P26885 142 aaKnown RBP10.01□□□□□ -0.81
HDAC6-228ENST00000486227 HTR5AP47898 357 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 CSRP3P50461 194 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 CXADRP78310 365 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 RNF4P78317 190 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 IL13RA1P78552 427 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 ZXDAP98168 799 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 PRICKLE4Q2TBC4 344 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 CDONQ4KMG0 1287 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 BEX5Q5H9J7 111 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 HEPHL1Q6MZM0 1159 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 PRSS45Q7RTY3 260 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 WDSUB1Q8N9V3 476 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 CHAC2Q8WUX2 184 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 SGCZQ96LD1 299 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 KCNS2Q9ULS6 477 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 ETV7Q9Y603 341 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 OR6C76A6NM76 312 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 HLA-AP01891 365 aaKnown RBP10.01□□□□□ -0.81
HDAC6-228ENST00000486227 C1QCP02747 245 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 LIPCP11150 499 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 RAG2P55895 527 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 IL11RAQ14626 422 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 SLC10A1Q14973 349 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 PRTGQ2VWP7 1150 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 YRDCQ86U90 279 aaKnown RBP10.01□□□□□ -0.81
HDAC6-228ENST00000486227 OR1J2Q8NGS2 313 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 OR2I1PQ8NGU4 316 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 TOMM40LQ969M1 308 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 MFRPQ9BY79 579 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 APMAPQ9HDC9 416 aa10.01□□□□□ -0.81
HDAC6-228ENST00000486227 ZNF223Q9UK11 482 aaPredicted RBP10.01□□□□□ -0.81
HDAC6-228ENST00000486227 EXO1Q9UQ84 846 aaKnown RBP10.01□□□□□ -0.81
HDAC6-228ENST00000486227 PCYT1BQ9Y5K3 369 aaPredicted RBP10.01□□□□□ -0.81
HDAC6-228ENST00000486227 ITGB2P05107 769 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 FCARP24071 287 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 CAMLGP49069 296 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 HMGA2P52926 109 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 MRM1Q6IN84 353 aaKnown RBP10□□□□□ -0.81
HDAC6-228ENST00000486227 CD163Q86VB7 1156 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 LHFPL5Q8TAF8 219 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 SLC19A3Q9BZV2 496 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 FKRPQ9H9S5 495 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 CACNA1IQ9P0X4 2223 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 MYO16Q9Y6X6 1858 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 MEIKINA0A087WXM9 373 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 TRIM64BA6NI03 449 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 KNG1P01042 644 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 FCGR2AP12318 317 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 ANXA7P20073 488 aaKnown RBP10□□□□□ -0.81
HDAC6-228ENST00000486227 BCKDHBP21953 392 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 GABRR1P24046 479 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 LUMP51884 338 aaPredicted RBP10□□□□□ -0.81
HDAC6-228ENST00000486227 HSF1Q00613 529 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 MPEG1Q2M385 716 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 LYPD8Q6UX82 237 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 OR51D1Q8NGF3 324 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 PIGCQ92535 297 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 VN1R1Q9GZP7 353 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 IL20Q9NYY1 176 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 ANKRD61A6NGH8 418 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 SNRPGP15A8MWD9 76 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 AGPAT2O15120 278 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 DIRAS3O95661 229 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 IL2RAP01589 272 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 IGHA2P01877 340 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 SRMP19623 302 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 OVCH1Q7RTY7 1134 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 SYT9Q86SS6 491 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 C9orf62Q8N4C0 152 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 OR5D18Q8NGL1 313 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 OR4Q3Q8NH05 313 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 STK35Q8TDR2 534 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 FBLIM1Q8WUP2 373 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 SORCS2Q96PQ0 1159 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 MICU1Q9BPX6 476 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 RAB9BQ9NP90 201 aa10□□□□□ -0.81
HDAC6-228ENST00000486227 CHST11Q9NPF2 352 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms