RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 CDAP32320 146 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 CDKN2AP42771 156 aaKnown RBP7.72□□□□□ -1.17
COL8A1-207ENST00000483969 CENPAP49450 140 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 ERFP50548 548 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 NAAAQ02083 359 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 HSF2Q03933 536 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 FMODQ06828 376 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 NPRL3Q12980 569 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 CCNIQ14094 377 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 CLEC12AQ5QGZ9 265 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 ZNF544Q6NX49 715 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 LEG1Q6P5S2 330 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 HIPK1Q86Z02 1210 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 GLB1L2Q8IW92 636 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 FBXL14Q8N1E6 418 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 Q8N1Y9 231 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 LRRC18Q8N456 261 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 OR2T33Q8NG76 320 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 OR52E2Q8NGJ4 325 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 OR4K13Q8NH42 304 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 OR5K1Q8NHB7 308 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 DNAJC9Q8WXX5 260 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 RASD2Q96D21 266 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 TEX12Q9BXU0 123 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 NUAK2Q9H093 628 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 RERGLQ9H628 205 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 EGLN3Q9H6Z9 239 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 TBC1D23Q9NUY8 699 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 LAMP3Q9UQV4 416 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 UGT2A1Q9Y4X1 527 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 TIMM10BQ9Y5J6 103 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 DOCK7Q96N67 2140 aa7.72□□□□□ -1.17
COL8A1-207ENST00000483969 IGKV1D-43A0A0B4J1Z2 117 aa7.71□□□□□ -1.18
COL8A1-207ENST00000483969 E7EQL1 145 aa7.71□□□□□ -1.18
COL8A1-207ENST00000483969 G3V2T6 193 aa7.71□□□□□ -1.18
COL8A1-207ENST00000483969 H3BN98 237 aa7.71□□□□□ -1.18
COL8A1-207ENST00000483969 H7C1C5 153 aa7.71□□□□□ -1.18
COL8A1-207ENST00000483969 IFNGP01579 166 aa7.71□□□□□ -1.18
COL8A1-207ENST00000483969 DANCRP0C864 163 aa7.71□□□□□ -1.18
COL8A1-207ENST00000483969 PATE4P0C8F1 98 aa7.71□□□□□ -1.18
COL8A1-207ENST00000483969 OSMP13725 252 aa7.71□□□□□ -1.18
COL8A1-207ENST00000483969 HIST1H1CP16403 213 aaKnown RBP7.71□□□□□ -1.18
COL8A1-207ENST00000483969 ZNF14P17017 642 aaPredicted RBP7.71□□□□□ -1.18
COL8A1-207ENST00000483969 MSR1P21757 451 aa7.71□□□□□ -1.18
COL8A1-207ENST00000483969 PRKACGP22612 351 aa7.71□□□□□ -1.18
COL8A1-207ENST00000483969 TTKP33981 857 aa7.71□□□□□ -1.18
COL8A1-207ENST00000483969 APLNRP35414 380 aa7.71□□□□□ -1.18
COL8A1-207ENST00000483969 ART1P52961 327 aa7.71□□□□□ -1.18
COL8A1-207ENST00000483969 ACTR3P61158 418 aa7.71□□□□□ -1.18
COL8A1-207ENST00000483969 LCN6P62502 163 aa7.71□□□□□ -1.18
COL8A1-207ENST00000483969 RPL11P62913 178 aaKnown RBP7.71□□□□□ -1.18
COL8A1-207ENST00000483969 GALK2Q01415 458 aa7.71□□□□□ -1.18
COL8A1-207ENST00000483969 RAB39AQ14964 217 aa7.71□□□□□ -1.18
COL8A1-207ENST00000483969 ATP6AP1Q15904 470 aa7.71□□□□□ -1.18
COL8A1-207ENST00000483969 SLC35F1Q5T1Q4 408 aa7.71□□□□□ -1.18
COL8A1-207ENST00000483969 SHQ1Q6PI26 577 aaKnown RBP7.71□□□□□ -1.18
COL8A1-207ENST00000483969 FOXL2NBQ6ZUU3 175 aa7.71□□□□□ -1.18
COL8A1-207ENST00000483969 YTHDF3Q7Z739 585 aaKnown RBP7.71□□□□□ -1.18
COL8A1-207ENST00000483969 TMEM179BQ7Z7N9 219 aa7.71□□□□□ -1.18
COL8A1-207ENST00000483969 LRRC75A-AS1Q8N1F1 130 aa7.71□□□□□ -1.18
COL8A1-207ENST00000483969 LNX2Q8N448 690 aa7.71□□□□□ -1.18
COL8A1-207ENST00000483969 ATG16L2Q8NAA4 619 aa7.71□□□□□ -1.18
COL8A1-207ENST00000483969 NUP37Q8NFH4 326 aa7.71□□□□□ -1.18
COL8A1-207ENST00000483969 FGFBP3Q8TAT2 258 aa7.71□□□□□ -1.18
COL8A1-207ENST00000483969 TEX47Q8TBZ9 253 aa7.71□□□□□ -1.18
COL8A1-207ENST00000483969 NEUROG1Q92886 237 aa7.71□□□□□ -1.18
COL8A1-207ENST00000483969 TRMT61AQ96FX7 289 aaKnown RBP7.71□□□□□ -1.18
COL8A1-207ENST00000483969 NMNAT3Q96T66 252 aa7.71□□□□□ -1.18
COL8A1-207ENST00000483969 NIPSNAP1Q9BPW8 284 aa7.71□□□□□ -1.18
COL8A1-207ENST00000483969 SSBP3Q9BWW4 388 aaPredicted RBP7.71□□□□□ -1.18
COL8A1-207ENST00000483969 SYT4Q9H2B2 425 aa7.71□□□□□ -1.18
COL8A1-207ENST00000483969 NTN4Q9HB63 628 aa7.71□□□□□ -1.18
COL8A1-207ENST00000483969 ZNF224Q9NZL3 707 aa7.71□□□□□ -1.18
COL8A1-207ENST00000483969 KLHL21Q9UJP4 597 aa7.71□□□□□ -1.18
COL8A1-207ENST00000483969 FBXO9Q9UK97 447 aaPredicted RBP7.71□□□□□ -1.18
COL8A1-207ENST00000483969 B9D1Q9UPM9 204 aa7.71□□□□□ -1.18
COL8A1-207ENST00000483969 COA3Q9Y2R0 106 aaPredicted RBP7.71□□□□□ -1.18
COL8A1-207ENST00000483969 FKBP7Q9Y680 259 aa7.71□□□□□ -1.18
COL8A1-207ENST00000483969 HCFC1P51610 2035 aa7.71□□□□□ -1.18
COL8A1-207ENST00000483969 IGHV2OR16-5A0A0B4J2B6 119 aa7.7□□□□□ -1.18
COL8A1-207ENST00000483969 ATP6V1G2-DDX39BF2Z307 99 aa7.7□□□□□ -1.18
COL8A1-207ENST00000483969 BHLHE40O14503 412 aa7.7□□□□□ -1.18
COL8A1-207ENST00000483969 HMGN1P05114 100 aa7.7□□□□□ -1.18
COL8A1-207ENST00000483969 MMP7P09237 267 aaPredicted RBP7.7□□□□□ -1.18
COL8A1-207ENST00000483969 CTLA4P16410 223 aa7.7□□□□□ -1.18
COL8A1-207ENST00000483969 ZNF32P17041 273 aa7.7□□□□□ -1.18
COL8A1-207ENST00000483969 POU1F1P28069 291 aa7.7□□□□□ -1.18
COL8A1-207ENST00000483969 CALCRP30988 508 aa7.7□□□□□ -1.18
COL8A1-207ENST00000483969 RAD52P43351 418 aa7.7□□□□□ -1.18
COL8A1-207ENST00000483969 LSM6P62312 80 aaKnown RBP7.7□□□□□ -1.18
COL8A1-207ENST00000483969 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.7□□□□□ -1.18
COL8A1-207ENST00000483969 SPOCK1Q08629 439 aa7.7□□□□□ -1.18
COL8A1-207ENST00000483969 SCRN3Q0VDG4 424 aa7.7□□□□□ -1.18
COL8A1-207ENST00000483969 DAG1Q14118 895 aa7.7□□□□□ -1.18
COL8A1-207ENST00000483969 ETFDHQ16134 617 aa7.7□□□□□ -1.18
COL8A1-207ENST00000483969 TBC1D28Q2M2D7 210 aa7.7□□□□□ -1.18
COL8A1-207ENST00000483969 PGGHGQ32M88 737 aa7.7□□□□□ -1.18
COL8A1-207ENST00000483969 SLC36A3Q495N2 470 aa7.7□□□□□ -1.18
COL8A1-207ENST00000483969 ZFP1Q6P2D0 407 aa7.7□□□□□ -1.18
COL8A1-207ENST00000483969 UNQ6126/PRO20091Q6UXV3 157 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms