RNA–Protein interactions for RNA: ENST00000483544.1

LINC00477-201, long intergenic non-protein coding RNA 477, humanhuman

TSL 2 BASIC

Gene LINC00477, Length 1,710 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477-201ENST00000483544 TUBA4BQ9H853 241 aa11.29□□□□□ -0.6
LINC00477-201ENST00000483544 PLEKHA1Q9HB21 404 aa11.29□□□□□ -0.6
LINC00477-201ENST00000483544 PARD6AQ9NPB6 346 aa11.29□□□□□ -0.6
LINC00477-201ENST00000483544 TMEM138Q9NPI0 162 aa11.29□□□□□ -0.6
LINC00477-201ENST00000483544 GRHPRQ9UBQ7 328 aa11.29□□□□□ -0.6
LINC00477-201ENST00000483544 ZNF629Q9UEG4 869 aaPredicted RBP11.29□□□□□ -0.6
LINC00477-201ENST00000483544 HIF3AQ9Y2N7 669 aa11.29□□□□□ -0.6
LINC00477-201ENST00000483544 ZNF281Q9Y2X9 895 aa11.29□□□□□ -0.6
LINC00477-201ENST00000483544 ELOA3DA6NLF2 546 aaPredicted RBP11.28□□□□□ -0.6
LINC00477-201ENST00000483544 SIGLEC5O15389 551 aa11.28□□□□□ -0.6
LINC00477-201ENST00000483544 EEF1E1O43324 174 aaKnown RBP11.28□□□□□ -0.6
LINC00477-201ENST00000483544 SIX6O95475 246 aa11.28□□□□□ -0.6
LINC00477-201ENST00000483544 CD14P08571 375 aa11.28□□□□□ -0.6
LINC00477-201ENST00000483544 HOXB5P09067 269 aa11.28□□□□□ -0.6
LINC00477-201ENST00000483544 RAB40ALP0C0E4 278 aa11.28□□□□□ -0.6
LINC00477-201ENST00000483544 RD3LP0DJH9 198 aa11.28□□□□□ -0.6
LINC00477-201ENST00000483544 HOXA5P20719 270 aa11.28□□□□□ -0.6
LINC00477-201ENST00000483544 MST1P26927 711 aa11.28□□□□□ -0.6
LINC00477-201ENST00000483544 GIFP27352 417 aa11.28□□□□□ -0.6
LINC00477-201ENST00000483544 S100A2P29034 98 aa11.28□□□□□ -0.6
LINC00477-201ENST00000483544 BTCP35070 178 aa11.28□□□□□ -0.6
LINC00477-201ENST00000483544 MNDAP41218 407 aa11.28□□□□□ -0.6
LINC00477-201ENST00000483544 PPICP45877 212 aa11.28□□□□□ -0.6
LINC00477-201ENST00000483544 CAPZBP47756 277 aa11.28□□□□□ -0.6
LINC00477-201ENST00000483544 CCR6P51684 374 aa11.28□□□□□ -0.6
LINC00477-201ENST00000483544 OR10A3P58181 314 aa11.28□□□□□ -0.6
LINC00477-201ENST00000483544 ZP1P60852 638 aa11.28□□□□□ -0.6
LINC00477-201ENST00000483544 SEC61A1P61619 476 aaKnown RBP11.28□□□□□ -0.6
LINC00477-201ENST00000483544 DCAF7P61962 342 aa11.28□□□□□ -0.6
LINC00477-201ENST00000483544 ELOA3BQ3SY89 546 aa11.28□□□□□ -0.6
LINC00477-201ENST00000483544 TP53I3Q53FA7 332 aa11.28□□□□□ -0.6
LINC00477-201ENST00000483544 TMEM255AQ5JRV8 349 aa11.28□□□□□ -0.6
LINC00477-201ENST00000483544 FNDC7Q5VTL7 733 aa11.28□□□□□ -0.6
LINC00477-201ENST00000483544 LRRN1Q6UXK5 716 aa11.28□□□□□ -0.6
LINC00477-201ENST00000483544 SSX6Q7RTT6 188 aa11.28□□□□□ -0.6
LINC00477-201ENST00000483544 SLC29A4Q7RTT9 530 aa11.28□□□□□ -0.6
LINC00477-201ENST00000483544 SLC16A9Q7RTY1 509 aa11.28□□□□□ -0.6
LINC00477-201ENST00000483544 GKN2Q86XP6 184 aa11.28□□□□□ -0.6
LINC00477-201ENST00000483544 C1QL4Q86Z23 238 aa11.28□□□□□ -0.6
LINC00477-201ENST00000483544 CPEB3Q8NE35 698 aaKnown RBP11.28□□□□□ -0.6
LINC00477-201ENST00000483544 ELOA3Q8NG57 546 aa11.28□□□□□ -0.6
LINC00477-201ENST00000483544 OR56B2PQ8NGI1 322 aa11.28□□□□□ -0.6
LINC00477-201ENST00000483544 OR10K1Q8NGX5 313 aa11.28□□□□□ -0.6
LINC00477-201ENST00000483544 HMGB4Q8WW32 186 aa11.28□□□□□ -0.6
LINC00477-201ENST00000483544 RAB40AQ8WXH6 277 aa11.28□□□□□ -0.6
LINC00477-201ENST00000483544 GCDHQ92947 438 aaPredicted RBP11.28□□□□□ -0.6
LINC00477-201ENST00000483544 SLC46A1Q96NT5 459 aa11.28□□□□□ -0.6
LINC00477-201ENST00000483544 DMRTA2Q96SC8 542 aa11.28□□□□□ -0.6
LINC00477-201ENST00000483544 SLITRK2Q9H156 845 aa11.28□□□□□ -0.6
LINC00477-201ENST00000483544 TCEAL2Q9H3H9 227 aaPredicted RBP11.28□□□□□ -0.6
LINC00477-201ENST00000483544 SLC2A4RGQ9NR83 387 aa11.28□□□□□ -0.6
LINC00477-201ENST00000483544 STARD5Q9NSY2 213 aa11.28□□□□□ -0.6
LINC00477-201ENST00000483544 WSB2Q9NYS7 404 aaPredicted RBP11.28□□□□□ -0.6
LINC00477-201ENST00000483544 FBXL3Q9UKT7 428 aa11.28□□□□□ -0.6
LINC00477-201ENST00000483544 COL5A1P20908 1838 aaPredicted RBP11.28□□□□□ -0.6
LINC00477-201ENST00000483544 LNP1A1A4G5 178 aa11.27□□□□□ -0.61
LINC00477-201ENST00000483544 DVL2O14641 736 aa11.27□□□□□ -0.61
LINC00477-201ENST00000483544 RRP8O43159 456 aaKnown RBP11.27□□□□□ -0.61
LINC00477-201ENST00000483544 MBTPS2O43462 519 aa11.27□□□□□ -0.61
LINC00477-201ENST00000483544 OR2A4O95047 310 aa11.27□□□□□ -0.61
LINC00477-201ENST00000483544 TCRBP04435 133 aa11.27□□□□□ -0.61
LINC00477-201ENST00000483544 ALDOBP05062 364 aa11.27□□□□□ -0.61
LINC00477-201ENST00000483544 CALCBP10092 127 aa11.27□□□□□ -0.61
LINC00477-201ENST00000483544 CPN1P15169 458 aa11.27□□□□□ -0.61
LINC00477-201ENST00000483544 CDX1P47902 265 aaPredicted RBP11.27□□□□□ -0.61
LINC00477-201ENST00000483544 GABRA4P48169 554 aa11.27□□□□□ -0.61
LINC00477-201ENST00000483544 HCCSP53701 268 aa11.27□□□□□ -0.61
LINC00477-201ENST00000483544 SLC26A5P58743 744 aa11.27□□□□□ -0.61
LINC00477-201ENST00000483544 RPS11P62280 158 aaKnown RBP eCLIP11.27□□□□□ -0.61
LINC00477-201ENST00000483544 MPPED2Q15777 294 aa11.27□□□□□ -0.61
LINC00477-201ENST00000483544 SLC25A35Q3KQZ1 300 aa11.27□□□□□ -0.61
LINC00477-201ENST00000483544 SLC36A2Q495M3 483 aa11.27□□□□□ -0.61
LINC00477-201ENST00000483544 FAM27D1Q5T7N8 215 aa11.27□□□□□ -0.61
LINC00477-201ENST00000483544 FAM199XQ6PEV8 388 aaPredicted RBP11.27□□□□□ -0.61
LINC00477-201ENST00000483544 FAM220AQ7Z4H9 259 aa11.27□□□□□ -0.61
LINC00477-201ENST00000483544 ATG4DQ86TL0 474 aaPredicted RBP11.27□□□□□ -0.61
LINC00477-201ENST00000483544 PRSS58Q8IYP2 241 aa11.27□□□□□ -0.61
LINC00477-201ENST00000483544 DEFB123Q8N688 67 aa11.27□□□□□ -0.61
LINC00477-201ENST00000483544 OR4N2Q8NGD1 307 aa11.27□□□□□ -0.61
LINC00477-201ENST00000483544 OR56B4Q8NH76 319 aa11.27□□□□□ -0.61
LINC00477-201ENST00000483544 OR5R1Q8NH85 324 aa11.27□□□□□ -0.61
LINC00477-201ENST00000483544 SMIM4Q8WVI0 70 aa11.27□□□□□ -0.61
LINC00477-201ENST00000483544 MVB12AQ96EY5 273 aa11.27□□□□□ -0.61
LINC00477-201ENST00000483544 RRNAD1Q96FB5 475 aaKnown RBP11.27□□□□□ -0.61
LINC00477-201ENST00000483544 HSPA12BQ96MM6 686 aa11.27□□□□□ -0.61
LINC00477-201ENST00000483544 OR2A7Q96R45 310 aa11.27□□□□□ -0.61
LINC00477-201ENST00000483544 ABHD1Q96SE0 405 aa11.27□□□□□ -0.61
LINC00477-201ENST00000483544 TGIF2Q9GZN2 237 aa11.27□□□□□ -0.61
LINC00477-201ENST00000483544 PCED1AQ9H1Q7 454 aa11.27□□□□□ -0.61
LINC00477-201ENST00000483544 METTL17Q9H7H0 456 aaPredicted RBP11.27□□□□□ -0.61
LINC00477-201ENST00000483544 RXFP3Q9NSD7 469 aa11.27□□□□□ -0.61
LINC00477-201ENST00000483544 GNG8Q9UK08 70 aa11.27□□□□□ -0.61
LINC00477-201ENST00000483544 FBXL4Q9UKA2 621 aa11.27□□□□□ -0.61
LINC00477-201ENST00000483544 CLDN16Q9Y5I7 305 aa11.27□□□□□ -0.61
LINC00477-201ENST00000483544 HEATR5AQ86XA9 2040 aa11.27□□□□□ -0.61
LINC00477-201ENST00000483544 TLCD2A6NGC4 264 aa11.26□□□□□ -0.61
LINC00477-201ENST00000483544 TMEM200CA6NKL6 621 aa11.26□□□□□ -0.61
LINC00477-201ENST00000483544 TGFBR3LH3BV60 316 aa11.26□□□□□ -0.61
LINC00477-201ENST00000483544 RFXAPO00287 272 aa11.26□□□□□ -0.61
LINC00477-201ENST00000483544 LDLRAD4O15165 306 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms