RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 LDLRAD2Q5SZI1 272 aa9.38□□□□□ -0.91
PRPF4B-206ENST00000481109 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.38□□□□□ -0.91
PRPF4B-206ENST00000481109 COMMD2Q86X83 199 aa9.38□□□□□ -0.91
PRPF4B-206ENST00000481109 IZUMO1Q8IYV9 350 aa9.38□□□□□ -0.91
PRPF4B-206ENST00000481109 FAM71E2Q8N5Q1 922 aa9.38□□□□□ -0.91
PRPF4B-206ENST00000481109 SH3RF2Q8TEC5 729 aa9.38□□□□□ -0.91
PRPF4B-206ENST00000481109 RAB40AQ8WXH6 277 aa9.38□□□□□ -0.91
PRPF4B-206ENST00000481109 RGP1Q92546 391 aaPredicted RBP9.38□□□□□ -0.91
PRPF4B-206ENST00000481109 TSLPQ969D9 159 aa9.38□□□□□ -0.91
PRPF4B-206ENST00000481109 MOB3AQ96BX8 217 aa9.38□□□□□ -0.91
PRPF4B-206ENST00000481109 LYSMD1Q96S90 227 aa9.38□□□□□ -0.91
PRPF4B-206ENST00000481109 CNTNAP3Q9BZ76 1288 aa9.38□□□□□ -0.91
PRPF4B-206ENST00000481109 RBKSQ9H477 322 aa9.38□□□□□ -0.91
PRPF4B-206ENST00000481109 OR5AC2Q9NZP5 309 aa9.38□□□□□ -0.91
PRPF4B-206ENST00000481109 OR6A2O95222 327 aa9.38□□□□□ -0.91
PRPF4B-206ENST00000481109 SOX14O95416 240 aa9.38□□□□□ -0.91
PRPF4B-206ENST00000481109 CST4P01036 141 aa9.38□□□□□ -0.91
PRPF4B-206ENST00000481109 HLA-DQB2P05538 268 aa9.38□□□□□ -0.91
PRPF4B-206ENST00000481109 OR8U9P0C7N5 309 aa9.38□□□□□ -0.91
PRPF4B-206ENST00000481109 KHKP50053 298 aa9.38□□□□□ -0.91
PRPF4B-206ENST00000481109 SLC22A6Q4U2R8 563 aa9.38□□□□□ -0.91
PRPF4B-206ENST00000481109 FAAP20Q6NZ36 180 aa9.38□□□□□ -0.91
PRPF4B-206ENST00000481109 ABHD15Q6UXT9 468 aa9.38□□□□□ -0.91
PRPF4B-206ENST00000481109 CMTM1Q8IZ96 169 aa9.38□□□□□ -0.91
PRPF4B-206ENST00000481109 OR13C5Q8NGS8 318 aa9.38□□□□□ -0.91
PRPF4B-206ENST00000481109 FAM46AQ96IP4 442 aaKnown RBP9.38□□□□□ -0.91
PRPF4B-206ENST00000481109 IL17FQ96PD4 163 aa9.38□□□□□ -0.91
PRPF4B-206ENST00000481109 SLC6A7Q99884 636 aa9.38□□□□□ -0.91
PRPF4B-206ENST00000481109 PBDC1Q9BVG4 233 aa9.38□□□□□ -0.91
PRPF4B-206ENST00000481109 SGPP1Q9BX95 441 aa9.38□□□□□ -0.91
PRPF4B-206ENST00000481109 TMEM39BQ9GZU3 492 aa9.38□□□□□ -0.91
PRPF4B-206ENST00000481109 FKBP11Q9NYL4 201 aa9.38□□□□□ -0.91
PRPF4B-206ENST00000481109 TGIF2-C20orf24A0A0A6YYL0 155 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 A0A0B4J2A0 478 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 J3KTA2 159 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 SCDO00767 359 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 TAAR5O14804 337 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 YY2O15391 372 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 ALOX12BO75342 701 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 B3GAT3O94766 335 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 SYNGR4O95473 234 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 TBX6O95947 436 aaPredicted RBP9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 OR5G3P0C626 314 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 ANOS1P23352 680 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 GLIPR1P48060 266 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 ATXN7L3Q14CW9 347 aaPredicted RBP9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 UGCGQ16739 394 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 MPZL3Q6UWV2 235 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 THSD4Q6ZMP0 1018 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 SPRED2Q7Z698 418 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 BIVMQ86UB2 503 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 CELF5Q8N6W0 485 aaKnown RBP9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 OR11L1Q8NGX0 322 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 MCHR2Q969V1 340 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 SLC35D1Q9NTN3 355 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 LYRM2Q9NU23 88 aaPredicted RBP9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 SHPKQ9UHJ6 478 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 SRPK3Q9UPE1 567 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 MYLKQ15746 1914 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 SIP14410 1827 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 LOC100289279A0A1B0GTE1 492 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 ERAL1O75616 437 aaKnown RBP9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 TNFSF15O95150 251 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 TSPAN15O95858 294 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 CTSLP07711 333 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 GTF2F2P13984 249 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 ZBTB25P24278 435 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 OR1E2P47887 323 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 RGNQ15493 299 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 DUSP5Q16690 384 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 MRNIPQ6NTE8 343 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 CEACAM19Q7Z692 300 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 STXBP6Q8NFX7 210 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 OR4C16Q8NGL9 310 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 ZNF596Q8TC21 504 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 LGALS14Q8TCE9 139 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 FAM222BQ8WU58 562 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 APOLD1Q96LR9 279 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 TAAR6Q96RI8 345 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 FZD8Q9H461 694 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 TRIM36Q9NQ86 728 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 PLEK2Q9NYT0 353 aa9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 FCF1Q9Y324 198 aaKnown RBP9.37□□□□□ -0.91
PRPF4B-206ENST00000481109 TRBV24-1A0A075B6N3 115 aa9.36□□□□□ -0.91
PRPF4B-206ENST00000481109 ANKUB1A6NFN9 424 aa9.36□□□□□ -0.91
PRPF4B-206ENST00000481109 RNF212BA8MTL3 300 aa9.36□□□□□ -0.91
PRPF4B-206ENST00000481109 C17orf105B2RV13 164 aa9.36□□□□□ -0.91
PRPF4B-206ENST00000481109 PGA4P0DJD7 388 aa9.36□□□□□ -0.91
PRPF4B-206ENST00000481109 PGA5P0DJD9 388 aa9.36□□□□□ -0.91
PRPF4B-206ENST00000481109 TNFRSF1BP20333 461 aa9.36□□□□□ -0.91
PRPF4B-206ENST00000481109 CCNOP22674 350 aa9.36□□□□□ -0.91
PRPF4B-206ENST00000481109 FPR2P25090 351 aa9.36□□□□□ -0.91
PRPF4B-206ENST00000481109 CD34P28906 385 aa9.36□□□□□ -0.91
PRPF4B-206ENST00000481109 AQP2P41181 271 aa9.36□□□□□ -0.91
PRPF4B-206ENST00000481109 CEBPDP49716 269 aaPredicted RBP9.36□□□□□ -0.91
PRPF4B-206ENST00000481109 RND2P52198 227 aa9.36□□□□□ -0.91
PRPF4B-206ENST00000481109 TAS2R43P59537 309 aa9.36□□□□□ -0.91
PRPF4B-206ENST00000481109 PPP2CBP62714 309 aa9.36□□□□□ -0.91
PRPF4B-206ENST00000481109 FKBP1AP62942 108 aaKnown RBP9.36□□□□□ -0.91
PRPF4B-206ENST00000481109 PPP2CAP67775 309 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms