RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 PHYHD1Q5SRE7 291 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 THEM4Q5T1C6 240 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 C10orf128Q5T292 105 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 C1orf185Q5T7R7 199 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 RNLSQ5VYX0 342 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 XAF1Q6GPH4 301 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 RTL6Q6ICC9 239 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 FOXL2NBQ6ZUU3 175 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 AAED1Q7RTV5 226 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 P4HA3Q7Z4N8 544 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 MCEMP1Q8IX19 187 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 TUSC5Q8IXB3 177 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 TIGD4Q8IY51 512 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 LINC01356Q8N9X3 169 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 C9orf106Q8NAJ2 232 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 OR6N1Q8NGY5 312 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 FNDC8Q8TC99 324 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 MCHR2Q969V1 340 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 MUL1Q969V5 352 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 INTS12Q96CB8 462 aaKnown RBP5.86□□□□□ -1.47
USP48-208ENST00000479177 WBP1Q96G27 269 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 TMEM80Q96HE8 168 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 GMPPAQ96IJ6 420 aaPredicted RBP5.86□□□□□ -1.47
USP48-208ENST00000479177 ALKBH3Q96Q83 286 aaPredicted RBP5.86□□□□□ -1.47
USP48-208ENST00000479177 RBP7Q96R05 134 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 TRIB1Q96RU8 372 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 ZNF649Q9BS31 505 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 CDCA4Q9BXL8 241 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 ULBP2Q9BZM5 246 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 CCDC90BQ9GZT6 254 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 SLCO5A1Q9H2Y9 848 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 CALHM2Q9HA72 323 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 MRPL22Q9NWU5 206 aaKnown RBP5.86□□□□□ -1.47
USP48-208ENST00000479177 GLTPQ9NZD2 209 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 ASH2LQ9UBL3 628 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 CLEC4AQ9UMR7 237 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 NOSIPQ9Y314 301 aaKnown RBP5.86□□□□□ -1.47
USP48-208ENST00000479177 EXOSC1Q9Y3B2 195 aaKnown RBP5.86□□□□□ -1.47
USP48-208ENST00000479177 UGT2A1Q9Y4X1 527 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 PCDHGB1Q9Y5G3 927 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 FAM215AQ9Y5M1 114 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 SNX5Q9Y5X3 404 aa5.86□□□□□ -1.47
USP48-208ENST00000479177 SPTBN1Q01082 2364 aaKnown RBP5.85□□□□□ -1.47
USP48-208ENST00000479177 TMEM129A0AVI4 362 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 MBD3L4A6NDZ8 208 aaPredicted RBP5.85□□□□□ -1.47
USP48-208ENST00000479177 MBD3L3A6NE82 208 aaPredicted RBP5.85□□□□□ -1.47
USP48-208ENST00000479177 MBD3L5A6NJ08 208 aaPredicted RBP5.85□□□□□ -1.47
USP48-208ENST00000479177 C12orf71A8MTZ7 269 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 DHHO43323 396 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 WDR1O75083 606 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 MRPL33O75394 65 aaKnown RBP5.85□□□□□ -1.47
USP48-208ENST00000479177 UPK3AO75631 287 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 PTHP01270 115 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 HRGP04196 525 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 TFAP2AP05549 437 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 YES1P07947 543 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 QDPRP09417 244 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 GABRA1P14867 456 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 ABOP16442 354 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 MYL12AP19105 171 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 ATP6V1E1P36543 226 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 ALDH3B2P48448 385 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 ETV1P50549 477 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 BLVRAP53004 296 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 SLURP1P55000 103 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 NR1H2P55055 460 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 ACTC1P68032 377 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 ACTA1P68133 377 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 EMX1Q04741 257 aaPredicted RBP5.85□□□□□ -1.47
USP48-208ENST00000479177 GLO1Q04760 184 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 SF3B4Q15427 424 aaKnown RBP eCLIP5.85□□□□□ -1.47
USP48-208ENST00000479177 NEDD8Q15843 81 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 ST3GAL2Q16842 350 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 RIPPLY2Q5TAB7 128 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 ZNF585AQ6P3V2 769 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 TEPPQ6URK8 271 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 GFRALQ6UXV0 394 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 SEM1Q6ZVN7 128 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 KCTD8Q6ZWB6 473 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 LINGO2Q7L985 606 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 ZNF367Q7RTV3 350 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 SLC16A9Q7RTY1 509 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 NUFIP2Q7Z417 695 aaKnown RBP5.85□□□□□ -1.47
USP48-208ENST00000479177 CDC20BQ86Y33 519 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 ERI1Q8IV48 349 aaKnown RBP5.85□□□□□ -1.47
USP48-208ENST00000479177 GLB1L2Q8IW92 636 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 SLC35F2Q8IXU6 374 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 GPR137CQ8N3F9 429 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 RFLNBQ8N5W9 214 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 ACBD7Q8N6N7 88 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 LINC00482Q8N8I6 264 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 SLC26A10Q8NG04 563 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 MBD3L2Q8NHZ7 208 aaPredicted RBP5.85□□□□□ -1.47
USP48-208ENST00000479177 NSMAFQ92636 917 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 FCGR1BQ92637 280 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 APH1AQ96BI3 265 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 FOXN4Q96NZ1 517 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 INTS14Q96SY0 518 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 SPATA25Q9BR10 227 aa5.85□□□□□ -1.47
USP48-208ENST00000479177 LINC00470Q9BZP3 86 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms