RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 CR1P17927 2039 aa11.86□□□□□ -0.51
SOX2-OT-208ENST00000477928 ABCA1O95477 2261 aa11.85□□□□□ -0.51
SOX2-OT-208ENST00000477928 IGHV4-61A0A0C4DH41 118 aa11.85□□□□□ -0.51
SOX2-OT-208ENST00000477928 VWC2LB2RUY7 222 aa11.85□□□□□ -0.51
SOX2-OT-208ENST00000477928 SOCS2O14508 198 aa11.85□□□□□ -0.51
SOX2-OT-208ENST00000477928 CD5LO43866 347 aa11.85□□□□□ -0.51
SOX2-OT-208ENST00000477928 MT-ND5P03915 603 aa11.85□□□□□ -0.51
SOX2-OT-208ENST00000477928 FAM157BP0CG42 384 aa11.85□□□□□ -0.51
SOX2-OT-208ENST00000477928 ZNF16P17020 682 aaPredicted RBP11.85□□□□□ -0.51
SOX2-OT-208ENST00000477928 LIPAP38571 399 aa11.85□□□□□ -0.51
SOX2-OT-208ENST00000477928 CDKN2AP42771 156 aaKnown RBP11.85□□□□□ -0.51
SOX2-OT-208ENST00000477928 ALDH3B1P43353 468 aa11.85□□□□□ -0.51
SOX2-OT-208ENST00000477928 ARHGDIAP52565 204 aa11.85□□□□□ -0.51
SOX2-OT-208ENST00000477928 MRPS11P82912 194 aaKnown RBP11.85□□□□□ -0.51
SOX2-OT-208ENST00000477928 LOXL1Q08397 574 aaPredicted RBP11.85□□□□□ -0.51
SOX2-OT-208ENST00000477928 ENDOGQ14249 297 aaKnown RBP11.85□□□□□ -0.51
SOX2-OT-208ENST00000477928 FLOT2Q14254 428 aa11.85□□□□□ -0.51
SOX2-OT-208ENST00000477928 ALKBH6Q3KRA9 238 aa11.85□□□□□ -0.51
SOX2-OT-208ENST00000477928 SLC36A3Q495N2 470 aa11.85□□□□□ -0.51
SOX2-OT-208ENST00000477928 PTCHD4Q6ZW05 846 aa11.85□□□□□ -0.51
SOX2-OT-208ENST00000477928 ZBTB46Q86UZ6 589 aa11.85□□□□□ -0.51
SOX2-OT-208ENST00000477928 ADGRG5Q8IZF4 528 aa11.85□□□□□ -0.51
SOX2-OT-208ENST00000477928 PIMREGQ9BSJ6 248 aa11.85□□□□□ -0.51
SOX2-OT-208ENST00000477928 SOX7Q9BT81 388 aa11.85□□□□□ -0.51
SOX2-OT-208ENST00000477928 NUAK2Q9H093 628 aa11.85□□□□□ -0.51
SOX2-OT-208ENST00000477928 TBCCD1Q9NVR7 557 aa11.85□□□□□ -0.51
SOX2-OT-208ENST00000477928 KCNG2Q9UJ96 466 aa11.85□□□□□ -0.51
SOX2-OT-208ENST00000477928 TCRBV3S1A0A5B6 114 aa11.84□□□□□ -0.51
SOX2-OT-208ENST00000477928 CRLF1O75462 422 aa11.84□□□□□ -0.51
SOX2-OT-208ENST00000477928 PPP1R3DO95685 299 aa11.84□□□□□ -0.51
SOX2-OT-208ENST00000477928 CST1P01037 141 aa11.84□□□□□ -0.51
SOX2-OT-208ENST00000477928 GASTP01350 101 aa11.84□□□□□ -0.51
SOX2-OT-208ENST00000477928 SCG5P05408 212 aa11.84□□□□□ -0.51
SOX2-OT-208ENST00000477928 ADRA2AP08913 450 aa11.84□□□□□ -0.51
SOX2-OT-208ENST00000477928 IGHV4-31P0DP07 118 aa11.84□□□□□ -0.51
SOX2-OT-208ENST00000477928 APEX1P27695 318 aaKnown RBP11.84□□□□□ -0.51
SOX2-OT-208ENST00000477928 CENPAP49450 140 aa11.84□□□□□ -0.51
SOX2-OT-208ENST00000477928 KLF3P57682 345 aaPredicted RBP11.84□□□□□ -0.51
SOX2-OT-208ENST00000477928 PPP2R2BQ00005 443 aa11.84□□□□□ -0.51
SOX2-OT-208ENST00000477928 HNRNPA0Q13151 305 aaKnown RBP11.84□□□□□ -0.51
SOX2-OT-208ENST00000477928 GGTLC2Q14390 218 aa11.84□□□□□ -0.51
SOX2-OT-208ENST00000477928 ZNF718Q3SXZ3 478 aa11.84□□□□□ -0.51
SOX2-OT-208ENST00000477928 MBNL2Q5VZF2 373 aaKnown RBP11.84□□□□□ -0.51
SOX2-OT-208ENST00000477928 LEG1Q6P5S2 330 aa11.84□□□□□ -0.51
SOX2-OT-208ENST00000477928 LNX2Q8N448 690 aa11.84□□□□□ -0.51
SOX2-OT-208ENST00000477928 AQP11Q8NBQ7 271 aa11.84□□□□□ -0.51
SOX2-OT-208ENST00000477928 PAPD5Q8NDF8 572 aaKnown RBP11.84□□□□□ -0.51
SOX2-OT-208ENST00000477928 NPEPL1Q8NDH3 523 aa11.84□□□□□ -0.51
SOX2-OT-208ENST00000477928 GJC3Q8NFK1 279 aa11.84□□□□□ -0.51
SOX2-OT-208ENST00000477928 OR9Q2Q8NGE9 314 aa11.84□□□□□ -0.51
SOX2-OT-208ENST00000477928 SYNPRQ8TBG9 265 aa11.84□□□□□ -0.51
SOX2-OT-208ENST00000477928 GTF3AQ92664 365 aaKnown RBP11.84□□□□□ -0.51
SOX2-OT-208ENST00000477928 CLPTM1LQ96KA5 538 aa11.84□□□□□ -0.51
SOX2-OT-208ENST00000477928 SAMD8Q96LT4 415 aa11.84□□□□□ -0.51
SOX2-OT-208ENST00000477928 WNT5BQ9H1J7 359 aa11.84□□□□□ -0.51
SOX2-OT-208ENST00000477928 CYSLTR2Q9NS75 346 aa11.84□□□□□ -0.51
SOX2-OT-208ENST00000477928 NKIRAS2Q9NYR9 191 aa11.84□□□□□ -0.51
SOX2-OT-208ENST00000477928 REV1Q9UBZ9 1251 aa11.84□□□□□ -0.51
SOX2-OT-208ENST00000477928 IL20RAQ9UHF4 553 aa11.84□□□□□ -0.51
SOX2-OT-208ENST00000477928 B9D1Q9UPM9 204 aa11.84□□□□□ -0.51
SOX2-OT-208ENST00000477928 POMPQ9Y244 141 aa11.84□□□□□ -0.51
SOX2-OT-208ENST00000477928 COA3Q9Y2R0 106 aaPredicted RBP11.84□□□□□ -0.51
SOX2-OT-208ENST00000477928 IGLV1-36A0A0B4J1U3 117 aa11.83□□□□□ -0.52
SOX2-OT-208ENST00000477928 C5orf49A4QMS7 147 aa11.83□□□□□ -0.52
SOX2-OT-208ENST00000477928 BHLHE40O14503 412 aa11.83□□□□□ -0.52
SOX2-OT-208ENST00000477928 GSC2O15499 205 aa11.83□□□□□ -0.52
SOX2-OT-208ENST00000477928 SGCEO43556 437 aa11.83□□□□□ -0.52
SOX2-OT-208ENST00000477928 TLX2O43763 284 aaPredicted RBP11.83□□□□□ -0.52
SOX2-OT-208ENST00000477928 CLPTM1O96005 669 aa11.83□□□□□ -0.52
SOX2-OT-208ENST00000477928 IGHV3-13P01766 116 aa11.83□□□□□ -0.52
SOX2-OT-208ENST00000477928 TP53P04637 393 aaPredicted RBP11.83□□□□□ -0.52
SOX2-OT-208ENST00000477928 LCKP06239 509 aa11.83□□□□□ -0.52
SOX2-OT-208ENST00000477928 HIST1H1CP16403 213 aaKnown RBP11.83□□□□□ -0.52
SOX2-OT-208ENST00000477928 GIFP27352 417 aa11.83□□□□□ -0.52
SOX2-OT-208ENST00000477928 NR4A2P43354 598 aa11.83□□□□□ -0.52
SOX2-OT-208ENST00000477928 RGS6P49758 472 aa11.83□□□□□ -0.52
SOX2-OT-208ENST00000477928 BLVRAP53004 296 aa11.83□□□□□ -0.52
SOX2-OT-208ENST00000477928 PCGF3Q3KNV8 242 aa11.83□□□□□ -0.52
SOX2-OT-208ENST00000477928 TMEM255AQ5JRV8 349 aa11.83□□□□□ -0.52
SOX2-OT-208ENST00000477928 C6orf52Q5T4I8 152 aa11.83□□□□□ -0.52
SOX2-OT-208ENST00000477928 UGT2A3Q6UWM9 527 aa11.83□□□□□ -0.52
SOX2-OT-208ENST00000477928 ZNF786Q8N393 782 aa11.83□□□□□ -0.52
SOX2-OT-208ENST00000477928 OR2T33Q8NG76 320 aa11.83□□□□□ -0.52
SOX2-OT-208ENST00000477928 OR10G2Q8NGC3 310 aa11.83□□□□□ -0.52
SOX2-OT-208ENST00000477928 AKR7LQ8NHP1 331 aa11.83□□□□□ -0.52
SOX2-OT-208ENST00000477928 GIPC3Q8TF64 312 aa11.83□□□□□ -0.52
SOX2-OT-208ENST00000477928 SNX33Q8WV41 574 aa11.83□□□□□ -0.52
SOX2-OT-208ENST00000477928 CANT1Q8WVQ1 401 aa11.83□□□□□ -0.52
SOX2-OT-208ENST00000477928 DNAJC9Q8WXX5 260 aa11.83□□□□□ -0.52
SOX2-OT-208ENST00000477928 NRBF2Q96F24 287 aa11.83□□□□□ -0.52
SOX2-OT-208ENST00000477928 C4orf45Q96LM5 186 aa11.83□□□□□ -0.52
SOX2-OT-208ENST00000477928 MDFIQ99750 246 aa11.83□□□□□ -0.52
SOX2-OT-208ENST00000477928 BPESC1Q9GZL8 116 aa11.83□□□□□ -0.52
SOX2-OT-208ENST00000477928 KLHL21Q9UJP4 597 aa11.83□□□□□ -0.52
SOX2-OT-208ENST00000477928 ATRQ13535 2644 aa11.82□□□□□ -0.52
SOX2-OT-208ENST00000477928 YLPM1P49750 1951 aaKnown RBP11.82□□□□□ -0.52
SOX2-OT-208ENST00000477928 LOC100509620A0A075B734 347 aa11.82□□□□□ -0.52
SOX2-OT-208ENST00000477928 A0A1W2PPW3 197 aa11.82□□□□□ -0.52
SOX2-OT-208ENST00000477928 LRP5LA4QPB2 252 aa11.82□□□□□ -0.52
SOX2-OT-208ENST00000477928 OR6C6A6NF89 314 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms