RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 CEACAM19Q7Z692 300 aa12.73□□□□□ -0.37
COL4A6-206ENST00000477085 IL17RDQ8NFM7 739 aa12.73□□□□□ -0.37
COL4A6-206ENST00000477085 OR5M9Q8NGP3 310 aa12.73□□□□□ -0.37
COL4A6-206ENST00000477085 C4orf45Q96LM5 186 aa12.73□□□□□ -0.37
COL4A6-206ENST00000477085 COQ7Q99807 217 aa12.73□□□□□ -0.37
COL4A6-206ENST00000477085 NXF2Q9GZY0 626 aaKnown RBP12.73□□□□□ -0.37
COL4A6-206ENST00000477085 NELFAQ9H3P2 528 aa12.73□□□□□ -0.37
COL4A6-206ENST00000477085 C1orf198Q9H425 327 aa12.73□□□□□ -0.37
COL4A6-206ENST00000477085 GPR35Q9HC97 309 aa12.73□□□□□ -0.37
COL4A6-206ENST00000477085 SLC7A10Q9NS82 523 aa12.73□□□□□ -0.37
COL4A6-206ENST00000477085 SNTG1Q9NSN8 517 aa12.73□□□□□ -0.37
COL4A6-206ENST00000477085 CENPMQ9NSP4 180 aa12.73□□□□□ -0.37
COL4A6-206ENST00000477085 SLC22A13Q9Y226 551 aa12.73□□□□□ -0.37
COL4A6-206ENST00000477085 A0A1W2PPK0 400 aa12.72□□□□□ -0.37
COL4A6-206ENST00000477085 SLC22A20A6NK97 555 aa12.72□□□□□ -0.37
COL4A6-206ENST00000477085 TMCC2O75069 709 aa12.72□□□□□ -0.37
COL4A6-206ENST00000477085 MRPL33O75394 65 aaKnown RBP12.72□□□□□ -0.37
COL4A6-206ENST00000477085 INHBBP09529 407 aa12.72□□□□□ -0.37
COL4A6-206ENST00000477085 FOXG1P55316 489 aaPredicted RBP12.72□□□□□ -0.37
COL4A6-206ENST00000477085 CAV3P56539 151 aa12.72□□□□□ -0.37
COL4A6-206ENST00000477085 LSM6P62312 80 aaKnown RBP12.72□□□□□ -0.37
COL4A6-206ENST00000477085 MRPS34P82930 218 aaKnown RBP12.72□□□□□ -0.37
COL4A6-206ENST00000477085 RNPS1Q15287 305 aaKnown RBP12.72□□□□□ -0.37
COL4A6-206ENST00000477085 RIPPLY2Q5TAB7 128 aa12.72□□□□□ -0.37
COL4A6-206ENST00000477085 UNQ9370/PRO34162Q6UXP9 181 aa12.72□□□□□ -0.37
COL4A6-206ENST00000477085 NR2C2APQ86WQ0 139 aa12.72□□□□□ -0.37
COL4A6-206ENST00000477085 GPR137CQ8N3F9 429 aa12.72□□□□□ -0.37
COL4A6-206ENST00000477085 LRRC18Q8N456 261 aa12.72□□□□□ -0.37
COL4A6-206ENST00000477085 MS4A15Q8N5U1 240 aa12.72□□□□□ -0.37
COL4A6-206ENST00000477085 OR10AC1Q8NH08 325 aa12.72□□□□□ -0.37
COL4A6-206ENST00000477085 CPT1CQ8TCG5 803 aa12.72□□□□□ -0.37
COL4A6-206ENST00000477085 SNRNP27Q8WVK2 155 aaKnown RBP12.72□□□□□ -0.37
COL4A6-206ENST00000477085 FBXO17Q96EF6 278 aa12.72□□□□□ -0.37
COL4A6-206ENST00000477085 TPK1Q9H3S4 243 aa12.72□□□□□ -0.37
COL4A6-206ENST00000477085 ZNF71Q9NQZ8 489 aaPredicted RBP12.72□□□□□ -0.37
COL4A6-206ENST00000477085 CLCF1Q9UBD9 225 aa12.72□□□□□ -0.37
COL4A6-206ENST00000477085 ZNF281Q9Y2X9 895 aa12.72□□□□□ -0.37
COL4A6-206ENST00000477085 PIN1P1O15428 100 aa12.71□□□□□ -0.37
COL4A6-206ENST00000477085 IL1AP01583 271 aa12.71□□□□□ -0.37
COL4A6-206ENST00000477085 MSR1P21757 451 aa12.71□□□□□ -0.37
COL4A6-206ENST00000477085 ANOS1P23352 680 aa12.71□□□□□ -0.37
COL4A6-206ENST00000477085 RIDAP52758 137 aaKnown RBP12.71□□□□□ -0.37
COL4A6-206ENST00000477085 CXADRP78310 365 aa12.71□□□□□ -0.37
COL4A6-206ENST00000477085 DYNC1I2Q13409 638 aaKnown RBP12.71□□□□□ -0.37
COL4A6-206ENST00000477085 TRAM1Q15629 374 aa12.71□□□□□ -0.37
COL4A6-206ENST00000477085 CEACAM16Q2WEN9 425 aa12.71□□□□□ -0.37
COL4A6-206ENST00000477085 LINC00303Q3SY05 128 aa12.71□□□□□ -0.37
COL4A6-206ENST00000477085 ZMAT1Q5H9K5 638 aa12.71□□□□□ -0.37
COL4A6-206ENST00000477085 FAM27BQ5VT28 67 aa12.71□□□□□ -0.37
COL4A6-206ENST00000477085 DEGS2Q6QHC5 323 aa12.71□□□□□ -0.37
COL4A6-206ENST00000477085 Q8NA96 180 aa12.71□□□□□ -0.37
COL4A6-206ENST00000477085 ORAI1Q96D31 301 aa12.71□□□□□ -0.37
COL4A6-206ENST00000477085 SH3GL3Q99963 347 aa12.71□□□□□ -0.37
COL4A6-206ENST00000477085 MED18Q9BUE0 208 aa12.71□□□□□ -0.37
COL4A6-206ENST00000477085 TMEM38BQ9NVV0 291 aa12.71□□□□□ -0.37
COL4A6-206ENST00000477085 CCDC59Q9P031 241 aaKnown RBP12.71□□□□□ -0.37
COL4A6-206ENST00000477085 EMC3Q9P0I2 261 aa12.71□□□□□ -0.37
COL4A6-206ENST00000477085 GSTK1Q9Y2Q3 226 aa12.71□□□□□ -0.37
COL4A6-206ENST00000477085 HSPB2A8KAH6 182 aa12.71□□□□□ -0.38
COL4A6-206ENST00000477085 GPRIN2O60269 458 aa12.71□□□□□ -0.38
COL4A6-206ENST00000477085 DOK2O60496 412 aa12.71□□□□□ -0.38
COL4A6-206ENST00000477085 ZNF254O75437 659 aa12.71□□□□□ -0.38
COL4A6-206ENST00000477085 NCR1O76036 304 aa12.71□□□□□ -0.38
COL4A6-206ENST00000477085 FAM87AP0C7U9 286 aa12.71□□□□□ -0.38
COL4A6-206ENST00000477085 CALRP27797 417 aaKnown RBP12.71□□□□□ -0.38
COL4A6-206ENST00000477085 ZNF84P51523 738 aa12.71□□□□□ -0.38
COL4A6-206ENST00000477085 HIST1H3AP68431 136 aa12.71□□□□□ -0.38
COL4A6-206ENST00000477085 MRPL28Q13084 256 aaKnown RBP12.71□□□□□ -0.38
COL4A6-206ENST00000477085 HSPB2Q16082 182 aa12.71□□□□□ -0.38
COL4A6-206ENST00000477085 ODF4Q2M2E3 257 aa12.71□□□□□ -0.38
COL4A6-206ENST00000477085 HIST2H3PS2Q5TEC6 136 aa12.71□□□□□ -0.38
COL4A6-206ENST00000477085 HIST2H3AQ71DI3 136 aa12.71□□□□□ -0.38
COL4A6-206ENST00000477085 CATSPERDQ86XM0 798 aa12.71□□□□□ -0.38
COL4A6-206ENST00000477085 OR51A4Q8NGJ6 313 aa12.71□□□□□ -0.38
COL4A6-206ENST00000477085 OR2AJ1Q8NGZ0 328 aa12.71□□□□□ -0.38
COL4A6-206ENST00000477085 OR5AK2Q8NH90 309 aa12.71□□□□□ -0.38
COL4A6-206ENST00000477085 SLC25A46Q96AG3 418 aa12.71□□□□□ -0.38
COL4A6-206ENST00000477085 OR14A2Q96R54 314 aa12.71□□□□□ -0.38
COL4A6-206ENST00000477085 LINC00470Q9BZP3 86 aa12.71□□□□□ -0.38
COL4A6-206ENST00000477085 SLCO5A1Q9H2Y9 848 aa12.71□□□□□ -0.38
COL4A6-206ENST00000477085 SIAEQ9HAT2 523 aa12.71□□□□□ -0.38
COL4A6-206ENST00000477085 G6PC2Q9NQR9 355 aa12.71□□□□□ -0.38
COL4A6-206ENST00000477085 POLR1DQ9Y2S0 133 aa12.71□□□□□ -0.38
COL4A6-206ENST00000477085 EMC9Q9Y3B6 208 aa12.71□□□□□ -0.38
COL4A6-206ENST00000477085 ZNF175Q9Y473 711 aa12.71□□□□□ -0.38
COL4A6-206ENST00000477085 CACNA1GO43497 2377 aa12.7□□□□□ -0.38
COL4A6-206ENST00000477085 H3BSH0 61 aa12.7□□□□□ -0.38
COL4A6-206ENST00000477085 H2BFMP0C1H6 154 aa12.7□□□□□ -0.38
COL4A6-206ENST00000477085 B4GALT1P15291 398 aa12.7□□□□□ -0.38
COL4A6-206ENST00000477085 AGTR1P30556 359 aa12.7□□□□□ -0.38
COL4A6-206ENST00000477085 CCR9P51686 369 aa12.7□□□□□ -0.38
COL4A6-206ENST00000477085 BMXP51813 675 aa12.7□□□□□ -0.38
COL4A6-206ENST00000477085 RSPO1Q2MKA7 263 aaPredicted RBP12.7□□□□□ -0.38
COL4A6-206ENST00000477085 ZNF404Q494X3 552 aa12.7□□□□□ -0.38
COL4A6-206ENST00000477085 CCDC92Q53HC0 331 aaPredicted RBP12.7□□□□□ -0.38
COL4A6-206ENST00000477085 ZNF324BQ6AW86 544 aaPredicted RBP12.7□□□□□ -0.38
COL4A6-206ENST00000477085 OR6Q1Q8NGQ2 317 aa12.7□□□□□ -0.38
COL4A6-206ENST00000477085 MCFD2Q8NI22 146 aa12.7□□□□□ -0.38
COL4A6-206ENST00000477085 FGFBP3Q8TAT2 258 aa12.7□□□□□ -0.38
COL4A6-206ENST00000477085 HAVCR2Q8TDQ0 301 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms