RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 TMEM89A2RUT3 159 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 PRSS37A4D1T9 235 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 OR6C6A6NF89 314 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 A6NIZ1 184 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 CLDN25C9JDP6 229 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 TRAPPC2LH3BP13 241 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 DCTN6O00399 190 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 SLC22A2O15244 555 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 RER1O15258 196 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 TPD52L2O43399 206 aaKnown RBP5.92□□□□□ -1.46
HDAC3-207ENST00000475549 ZNF682O95780 498 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 GPANK1O95872 356 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 SERPINA1P01009 418 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 IGHV2-70P01814 119 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 VIMP08670 466 aaKnown RBP5.92□□□□□ -1.46
HDAC3-207ENST00000475549 DBHP09172 617 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 ANPEPP15144 967 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 EPHA1P21709 976 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 CDKN2AP42771 156 aaKnown RBP5.92□□□□□ -1.46
HDAC3-207ENST00000475549 OMPP47874 163 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 LIMS1P48059 325 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 SLC9A3P48764 834 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 RAP1BP61224 184 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 PCBD1P61457 104 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 RAP1AP62834 184 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 LCN2P80188 198 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 TEKQ02763 1124 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 HLXQ14774 488 aaPredicted RBP5.92□□□□□ -1.46
HDAC3-207ENST00000475549 ZMYND11Q15326 602 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 ZBED5Q49AG3 693 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 IFI44LQ53G44 452 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 CCDC92Q53HC0 331 aaPredicted RBP5.92□□□□□ -1.46
HDAC3-207ENST00000475549 MTX3Q5HYI7 312 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 FAM205BPQ63HN1 556 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 PTCHD4Q6ZW05 846 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 USP43Q70EL4 1123 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 C1QL2Q7Z5L3 287 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 SYT9Q86SS6 491 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 PEG10Q86TG7 708 aaKnown RBP5.92□□□□□ -1.46
HDAC3-207ENST00000475549 C1orf174Q8IYL3 243 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 ALDH16A1Q8IZ83 802 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 ZDHHC22Q8N966 263 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 DEFB108BQ8NET1 73 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 FNDC8Q8TC99 324 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 FAM216AQ8WUB2 273 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 C22orf15Q8WYQ4 148 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 LZICQ8WZA0 190 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 RAB1CQ92928 201 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 RASD2Q96D21 266 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 HAVCR1Q96D42 359 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 CMBLQ96DG6 245 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 ELMOD3Q96FG2 381 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 FAM46AQ96IP4 442 aaKnown RBP5.92□□□□□ -1.46
HDAC3-207ENST00000475549 C7orf34Q96L11 122 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 TSSK2Q96PF2 358 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 DCLRE1CQ96SD1 692 aaKnown RBP5.92□□□□□ -1.46
HDAC3-207ENST00000475549 HOPXQ9BPY8 73 aaPredicted RBP5.92□□□□□ -1.46
HDAC3-207ENST00000475549 PLA2G12AQ9BZM1 189 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 SYT4Q9H2B2 425 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 C7orf69Q9H7B7 122 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 NRIP3Q9NQ35 241 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 TMEM106BQ9NUM4 274 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 TBCCD1Q9NVR7 557 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 ARGLU1Q9NWB6 273 aaPredicted RBP5.92□□□□□ -1.46
HDAC3-207ENST00000475549 UBAP1Q9NZ09 502 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 GRHPRQ9UBQ7 328 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 PURGQ9UJV8 347 aaKnown RBP5.92□□□□□ -1.46
HDAC3-207ENST00000475549 ZDHHC8Q9ULC8 765 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 PCDHB10Q9UN67 800 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 COA3Q9Y2R0 106 aaPredicted RBP5.92□□□□□ -1.46
HDAC3-207ENST00000475549 ENPP4Q9Y6X5 453 aa5.92□□□□□ -1.46
HDAC3-207ENST00000475549 A0A0G2JMP0 313 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 TEX13CA0A0J9YWL9 993 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 A0A0X1KG70 313 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 A0A1W2PRQ8 180 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 GMNCA6NCL1 334 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 C12orf71A8MTZ7 269 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 H0YL77 283 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 J3QLI3 93 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 AHCYL1O43865 530 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 SLC16A7O60669 478 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 DIRAS1O95057 198 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 ABHD16AO95870 558 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 MT-ND5P03915 603 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 SBK2P0C263 348 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 COX5BP10606 129 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 NR2C1P13056 603 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 EGR1P18146 543 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 KITLGP21583 273 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 ANOS1P23352 680 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 RPL4P36578 427 aaKnown RBP5.91□□□□□ -1.46
HDAC3-207ENST00000475549 LIPAP38571 399 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 PMELP40967 661 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 GUCA1AP43080 201 aaPredicted RBP5.91□□□□□ -1.46
HDAC3-207ENST00000475549 SLC6A9P48067 706 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 HIST1H3AP68431 136 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 TNFAIP6P98066 277 aaPredicted RBP5.91□□□□□ -1.46
HDAC3-207ENST00000475549 DGCR6Q14129 220 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 MEP1BQ16820 701 aa5.91□□□□□ -1.46
HDAC3-207ENST00000475549 ANKDD1AQ495B1 522 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms