RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 WDR59Q6PJI9 974 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 BTNL8Q6UX41 500 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 GPSM1Q86YR5 675 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 PIP4P2Q8N4L2 257 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 SPEM1Q8N4L4 309 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 RNF149Q8NC42 400 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 OR52L1Q8NGH7 329 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 CASTOR1Q8WTX7 329 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 GATAD1Q8WUU5 269 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 CMBLQ96DG6 245 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 PELI1Q96FA3 418 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 ABHD14AQ9BUJ0 271 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 GALNT9Q9HCQ5 603 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 SLC45A2Q9UMX9 530 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 ST3GAL6Q9Y274 331 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 FNDC3AQ9Y2H6 1198 aaKnown RBP3.11□□□□□ -1.91
UBR3-208ENST00000474426 RAP2CQ9Y3L5 183 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 KAT6AQ92794 2004 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 WIZO95785 1651 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 ADCY10Q96PN6 1610 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 NFASCO94856 1347 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 TRAV30A0A087WSZ9 112 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 A0A087WWL8 130 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 CENPVL1A0A0U1RR11 272 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 CENPVL3A0A0U1RRI6 287 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 SPAARA0A1B0GVQ0 90 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 TMEM218A2RU14 115 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 EFCAB9A8MZ26 197 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 PTGESO14684 152 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 CPNE6O95741 557 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 LALBAP00709 142 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 OXTP01178 125 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 IFNA1P01562 189 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 RHOCP08134 193 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 NMBP08949 121 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 C4BPBP20851 252 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 S100A2P29034 98 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 SNRPD1P62314 119 aaKnown RBP3.11□□□□□ -1.91
UBR3-208ENST00000474426 FGFBP1Q14512 234 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 HERPUD1Q15011 391 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 DPY19L1Q2PZI1 675 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 GGTA1PQ4G0N0 100 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 ENPP6Q6UWR7 440 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 SLC47A2Q86VL8 602 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 ZNF761Q86XN6 746 aaPredicted RBP3.11□□□□□ -1.91
UBR3-208ENST00000474426 ZNF567Q8N184 647 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 MUC15Q8N387 334 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 D2HGDHQ8N465 521 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 JAGN1Q8N5M9 183 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 PTGR2Q8N8N7 351 aaPredicted RBP3.11□□□□□ -1.91
UBR3-208ENST00000474426 ACOT4Q8N9L9 421 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 OR1N2Q8NGR9 330 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 FAM3CQ92520 227 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 APH1AQ96BI3 265 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 ROPN1LQ96C74 230 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 RASL10BQ96S79 203 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 GPR22Q99680 433 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 FAM124BQ9H5Z6 455 aaPredicted RBP3.11□□□□□ -1.91
UBR3-208ENST00000474426 NHEJ1Q9H9Q4 299 aaPredicted RBP3.11□□□□□ -1.91
UBR3-208ENST00000474426 SLC7A10Q9NS82 523 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 CBLN4Q9NTU7 201 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 LGALS13Q9UHV8 139 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 MICAL3Q7RTP6 2002 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 CACNA1FO60840 1977 aa3.11□□□□□ -1.91
UBR3-208ENST00000474426 PTPRJQ12913 1337 aa3.1□□□□□ -1.91
UBR3-208ENST00000474426 PSMB11A5LHX3 300 aa3.1□□□□□ -1.91
UBR3-208ENST00000474426 ASPDHA6ND91 283 aa3.1□□□□□ -1.91
UBR3-208ENST00000474426 SLC31A1O15431 190 aa3.1□□□□□ -1.91
UBR3-208ENST00000474426 ZNF207O43670 478 aaKnown RBP3.1□□□□□ -1.91
UBR3-208ENST00000474426 MPZL2O60487 215 aa3.1□□□□□ -1.91
UBR3-208ENST00000474426 B4GALT3O60512 393 aa3.1□□□□□ -1.91
UBR3-208ENST00000474426 WDR1O75083 606 aa3.1□□□□□ -1.91
UBR3-208ENST00000474426 NFATC1O95644 943 aa3.1□□□□□ -1.91
UBR3-208ENST00000474426 VIPP01282 170 aa3.1□□□□□ -1.91
UBR3-208ENST00000474426 OR5H8P0DN80 308 aa3.1□□□□□ -1.91
UBR3-208ENST00000474426 TAL1P17542 331 aaPredicted RBP3.1□□□□□ -1.91
UBR3-208ENST00000474426 AK4P27144 223 aaPredicted RBP3.1□□□□□ -1.91
UBR3-208ENST00000474426 PIGAP37287 484 aa3.1□□□□□ -1.91
UBR3-208ENST00000474426 ZNF133P52736 654 aaPredicted RBP3.1□□□□□ -1.91
UBR3-208ENST00000474426 FOXG1P55316 489 aaPredicted RBP3.1□□□□□ -1.91
UBR3-208ENST00000474426 TAS2R43P59537 309 aa3.1□□□□□ -1.91
UBR3-208ENST00000474426 POLR2LP62875 67 aaKnown RBP3.1□□□□□ -1.91
UBR3-208ENST00000474426 RAE1P78406 368 aaKnown RBP3.1□□□□□ -1.91
UBR3-208ENST00000474426 RHOGP84095 191 aa3.1□□□□□ -1.91
UBR3-208ENST00000474426 KLRC3Q07444 240 aa3.1□□□□□ -1.91
UBR3-208ENST00000474426 HTR4Q13639 388 aa3.1□□□□□ -1.91
UBR3-208ENST00000474426 ZNF235Q14590 738 aa3.1□□□□□ -1.91
UBR3-208ENST00000474426 COL5A1-AS1Q5SY13 56 aa3.1□□□□□ -1.91
UBR3-208ENST00000474426 FAM78BQ5VT40 261 aa3.1□□□□□ -1.91
UBR3-208ENST00000474426 PRSS54Q6PEW0 395 aa3.1□□□□□ -1.91
UBR3-208ENST00000474426 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.1□□□□□ -1.91
UBR3-208ENST00000474426 LINC00336Q6ZUF6 198 aa3.1□□□□□ -1.91
UBR3-208ENST00000474426 MBOAT2Q6ZWT7 520 aa3.1□□□□□ -1.91
UBR3-208ENST00000474426 MAVSQ7Z434 540 aa3.1□□□□□ -1.91
UBR3-208ENST00000474426 BMPERQ8N8U9 685 aa3.1□□□□□ -1.91
UBR3-208ENST00000474426 OR4E2Q8NGC2 313 aa3.1□□□□□ -1.91
UBR3-208ENST00000474426 OR2T4Q8NH00 348 aa3.1□□□□□ -1.91
UBR3-208ENST00000474426 HAVCR2Q8TDQ0 301 aa3.1□□□□□ -1.91
UBR3-208ENST00000474426 SPRYD4Q8WW59 207 aaPredicted RBP3.1□□□□□ -1.91
UBR3-208ENST00000474426 GPR146Q96CH1 333 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms