RNA–Protein interactions for RNA: ENST00000474036.1

FN1-219, Transcript of fibronectin 1, human

TSL 2

Gene FN1, Length 1,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-219	ENST00000474036	FAM83F	Q8NEG4	500 aa	Predicted RBP	4.61	□□□□□ -1.67
FN1-219	ENST00000474036	OR13C2	Q8NGS9	318 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	FANK1	Q8TC84	345 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	ACOT11	Q8WXI4	607 aa	Predicted RBP	4.61	□□□□□ -1.67
FN1-219	ENST00000474036	CNOT9	Q92600	299 aa	Known RBP	4.61	□□□□□ -1.67
FN1-219	ENST00000474036	OSTF1	Q92882	214 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	TMEM203	Q969S6	136 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	C8orf44	Q96CB5	159 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	TRMT61A	Q96FX7	289 aa	Known RBP	4.61	□□□□□ -1.67
FN1-219	ENST00000474036	CEP19	Q96LK0	163 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	GPR137	Q96N19	417 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	TAPBPL	Q9BX59	468 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	HES7	Q9BYE0	225 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	PRRG3	Q9BZD7	231 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	POLR2J2	Q9GZM3	115 aa	Known RBP	4.61	□□□□□ -1.67
FN1-219	ENST00000474036	ZNF350	Q9GZX5	532 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	RACGAP1	Q9H0H5	632 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	MMP27	Q9H306	513 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	ANKRD19P	Q9H560	264 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	RERGL	Q9H628	205 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	MED20	Q9H944	212 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	FOLH1B	Q9HBA9	442 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	G6PC2	Q9NQR9	355 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	SNTG1	Q9NSN8	517 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	CHCHD3	Q9NX63	227 aa	Known RBP	4.61	□□□□□ -1.67
FN1-219	ENST00000474036	SEC14L4	Q9UDX3	406 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	EPHA6	Q9UF33	1036 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	ZNF229	Q9UJW7	825 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	SSR3	Q9UNL2	185 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	DIMT1	Q9UNQ2	313 aa	Known RBP	4.61	□□□□□ -1.67
FN1-219	ENST00000474036	YARS2	Q9Y2Z4	477 aa	Known RBP	4.61	□□□□□ -1.67
FN1-219	ENST00000474036	EXOSC1	Q9Y3B2	195 aa	Known RBP	4.61	□□□□□ -1.67
FN1-219	ENST00000474036	KLK4	Q9Y5K2	254 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	SPIN1	Q9Y657	262 aa	Predicted RBP	4.61	□□□□□ -1.67
FN1-219	ENST00000474036	CDH10	Q9Y6N8	788 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	HEATR5B	Q9P2D3	2071 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	PKD1L1	Q8TDX9	2849 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	USF3	Q68DE3	2245 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	NCKAP5	O14513	1909 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	IRGM	A1A4Y4	181 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	SLC22A23	A1A5C7	686 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	FUOM	A2VDF0	154 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	FAM90A20P	A6NIJ5	464 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	FAM183A	A6NL82	134 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	CDC42EP2	O14613	210 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	SURF4	O15260	269 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	SPRY1	O43609	319 aa	Predicted RBP	4.6	□□□□□ -1.67
FN1-219	ENST00000474036	PLOD3	O60568	738 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	UPK1B	O75841	260 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	OR2B3	O76000	313 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	KCNK2	O95069	426 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	CDRT1	O95170	752 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	WDPCP	O95876	746 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	IFNA2	P01563	188 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	IGKV1D-16	P01601	117 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	IFNA16	P05015	189 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	ATP1B1	P05026	303 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	HMGN1	P05114	100 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	SLC35E2	P0CK97	266 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	SPN	P16150	400 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	CHRNB4	P30926	498 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	CRYBB2	P43320	205 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	MTNR1A	P48039	350 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	SOX2	P48431	317 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	TGM4	P49221	684 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	PPP5C	P53041	499 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	BTG2	P78543	158 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	DCD	P81605	110 aa	Known RBP	4.6	□□□□□ -1.67
FN1-219	ENST00000474036	RELA	Q04206	551 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	MXD1	Q05195	221 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	TFF3	Q07654	80 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	STX4	Q12846	297 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	MLLT11	Q13015	90 aa	Predicted RBP	4.6	□□□□□ -1.67
FN1-219	ENST00000474036	MADCAM1	Q13477	382 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	OXA1L	Q15070	435 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	ZNHIT3	Q15649	155 aa	Predicted RBP	4.6	□□□□□ -1.67
FN1-219	ENST00000474036	PRTG	Q2VWP7	1150 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	NDUFAF6	Q330K2	333 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	ZNF766	Q5HY98	468 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	SLC25A30	Q5SVS4	291 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	PDZK1	Q5T2W1	519 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	C10orf25	Q5T742	122 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	ATPAF1	Q5TC12	328 aa	Predicted RBP	4.6	□□□□□ -1.67
FN1-219	ENST00000474036	RUSC1-AS1	Q66K80	236 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	C22orf42	Q6IC83	251 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	PLBD1	Q6P4A8	553 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	B3GLCT	Q6Y288	498 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	WDR88	Q6ZMY6	472 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	LHFPL3	Q86UP9	236 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	DOLPP1	Q86YN1	238 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	RPRML	Q8N4K4	120 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	TMEM99	Q8N816	258 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	NRAC	Q8N912	160 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	POGLUT1	Q8NBL1	392 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	PROKR2	Q8NFJ6	384 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	OR4F15	Q8NGB8	312 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	OR4N2	Q8NGD1	307 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	TMEM239	Q8WW34	195 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	ASB5	Q8WWX0	329 aa		4.6	□□□□□ -1.67
FN1-219	ENST00000474036	ZNF845	Q96IR2	970 aa	Predicted RBP	4.6	□□□□□ -1.67

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