RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 SEMG1P04279 462 aa14.14□□□□□ -0.15
USP40-212ENST00000473191 DBHP09172 617 aa14.14□□□□□ -0.15
USP40-212ENST00000473191 NR2C1P13056 603 aa14.14□□□□□ -0.15
USP40-212ENST00000473191 ITGA2P17301 1181 aa14.14□□□□□ -0.15
USP40-212ENST00000473191 RHCEP18577 417 aa14.14□□□□□ -0.15
USP40-212ENST00000473191 CDKN2AP42771 156 aaKnown RBP14.14□□□□□ -0.15
USP40-212ENST00000473191 PSG7Q13046 419 aa14.14□□□□□ -0.15
USP40-212ENST00000473191 DGCR6Q14129 220 aa14.14□□□□□ -0.15
USP40-212ENST00000473191 MEP1BQ16820 701 aa14.14□□□□□ -0.15
USP40-212ENST00000473191 VASH1Q7L8A9 365 aaPredicted RBP14.14□□□□□ -0.15
USP40-212ENST00000473191 RRM2BQ7LG56 351 aa14.14□□□□□ -0.15
USP40-212ENST00000473191 FNDC8Q8TC99 324 aa14.14□□□□□ -0.15
USP40-212ENST00000473191 CCL17Q92583 94 aa14.14□□□□□ -0.15
USP40-212ENST00000473191 CMTM5Q96DZ9 223 aa14.14□□□□□ -0.15
USP40-212ENST00000473191 RSRC1Q96IZ7 334 aaKnown RBP14.14□□□□□ -0.15
USP40-212ENST00000473191 DHRS1Q96LJ7 313 aa14.14□□□□□ -0.15
USP40-212ENST00000473191 ANKRD19PQ9H560 264 aa14.14□□□□□ -0.15
USP40-212ENST00000473191 METTL17Q9H7H0 456 aaPredicted RBP14.14□□□□□ -0.15
USP40-212ENST00000473191 ZNF665Q9H7R5 613 aa14.14□□□□□ -0.15
USP40-212ENST00000473191 SPAG4Q9NPE6 437 aa14.14□□□□□ -0.15
USP40-212ENST00000473191 GPR160Q9UJ42 338 aa14.14□□□□□ -0.15
USP40-212ENST00000473191 RPS6KA6Q9UK32 745 aa14.14□□□□□ -0.15
USP40-212ENST00000473191 TANC2Q9HCD6 1990 aa14.13□□□□□ -0.15
USP40-212ENST00000473191 FBN3Q75N90 2809 aa14.13□□□□□ -0.15
USP40-212ENST00000473191 C12orf71A8MTZ7 269 aa14.13□□□□□ -0.15
USP40-212ENST00000473191 DYNC1I1O14576 645 aa14.13□□□□□ -0.15
USP40-212ENST00000473191 XKRYO14609 159 aa14.13□□□□□ -0.15
USP40-212ENST00000473191 NDUFB2O95178 105 aa14.13□□□□□ -0.15
USP40-212ENST00000473191 TFP02787 698 aa14.13□□□□□ -0.15
USP40-212ENST00000473191 SDHAP31040 664 aa14.13□□□□□ -0.15
USP40-212ENST00000473191 HTR5AP47898 357 aa14.13□□□□□ -0.15
USP40-212ENST00000473191 CCDC92Q53HC0 331 aaPredicted RBP14.13□□□□□ -0.15
USP40-212ENST00000473191 Q6ZR03 302 aa14.13□□□□□ -0.15
USP40-212ENST00000473191 ZER1Q7Z7L7 766 aa14.13□□□□□ -0.15
USP40-212ENST00000473191 CYP4Z1Q86W10 505 aa14.13□□□□□ -0.15
USP40-212ENST00000473191 ALDH16A1Q8IZ83 802 aa14.13□□□□□ -0.15
USP40-212ENST00000473191 GPX7Q96SL4 187 aaPredicted RBP14.13□□□□□ -0.15
USP40-212ENST00000473191 NUAK2Q9H093 628 aa14.13□□□□□ -0.15
USP40-212ENST00000473191 G6PC2Q9NQR9 355 aa14.13□□□□□ -0.15
USP40-212ENST00000473191 STARD10Q9Y365 291 aa14.13□□□□□ -0.15
USP40-212ENST00000473191 CLDN25C9JDP6 229 aa14.12□□□□□ -0.15
USP40-212ENST00000473191 RER1O15258 196 aa14.12□□□□□ -0.15
USP40-212ENST00000473191 SGCEO43556 437 aa14.12□□□□□ -0.15
USP40-212ENST00000473191 PLPP2O43688 288 aa14.12□□□□□ -0.15
USP40-212ENST00000473191 PPP1R3DO95685 299 aa14.12□□□□□ -0.15
USP40-212ENST00000473191 ABHD16AO95870 558 aa14.12□□□□□ -0.15
USP40-212ENST00000473191 IGHV2-5P01817 119 aa14.12□□□□□ -0.15
USP40-212ENST00000473191 PRDX6P30041 224 aa14.12□□□□□ -0.15
USP40-212ENST00000473191 GUCA1AP43080 201 aaPredicted RBP14.12□□□□□ -0.15
USP40-212ENST00000473191 PCBD1P61457 104 aa14.12□□□□□ -0.15
USP40-212ENST00000473191 C1orf94Q6P1W5 598 aa14.12□□□□□ -0.15
USP40-212ENST00000473191 FAHD2BQ6P2I3 314 aaPredicted RBP14.12□□□□□ -0.15
USP40-212ENST00000473191 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.12□□□□□ -0.15
USP40-212ENST00000473191 SYT9Q86SS6 491 aa14.12□□□□□ -0.15
USP40-212ENST00000473191 OR51F2Q8NH61 342 aa14.12□□□□□ -0.15
USP40-212ENST00000473191 FAHD2AQ96GK7 314 aa14.12□□□□□ -0.15
USP40-212ENST00000473191 ARL8BQ9NVJ2 186 aa14.12□□□□□ -0.15
USP40-212ENST00000473191 VSX1Q9NZR4 365 aaPredicted RBP14.12□□□□□ -0.15
USP40-212ENST00000473191 ASH2LQ9UBL3 628 aa14.12□□□□□ -0.15
USP40-212ENST00000473191 CD300AQ9UGN4 299 aa14.12□□□□□ -0.15
USP40-212ENST00000473191 TMEM5Q9Y2B1 443 aa14.12□□□□□ -0.15
USP40-212ENST00000473191 GRIP1Q9Y3R0 1128 aa14.12□□□□□ -0.15
USP40-212ENST00000473191 FAM32AQ9Y421 112 aaKnown RBP14.12□□□□□ -0.15
USP40-212ENST00000473191 LOC105371242A0A075B767 164 aa14.11□□□□□ -0.15
USP40-212ENST00000473191 PLSCR5A0PG75 271 aa14.11□□□□□ -0.15
USP40-212ENST00000473191 UNC119BA6NIH7 251 aa14.11□□□□□ -0.15
USP40-212ENST00000473191 VENTXO95231 258 aa14.11□□□□□ -0.15
USP40-212ENST00000473191 MOGQ16653 247 aa14.11□□□□□ -0.15
USP40-212ENST00000473191 HFEQ30201 348 aa14.11□□□□□ -0.15
USP40-212ENST00000473191 FAM209AQ5JX71 171 aa14.11□□□□□ -0.15
USP40-212ENST00000473191 CMBLQ96DG6 245 aa14.11□□□□□ -0.15
USP40-212ENST00000473191 PYURFQ96I23 114 aa14.11□□□□□ -0.15
USP40-212ENST00000473191 FN3KQ9H479 309 aa14.11□□□□□ -0.15
USP40-212ENST00000473191 GORASP2Q9H8Y8 452 aa14.11□□□□□ -0.15
USP40-212ENST00000473191 PLEK2Q9NYT0 353 aa14.11□□□□□ -0.15
USP40-212ENST00000473191 NDRG4Q9ULP0 352 aaKnown RBP14.11□□□□□ -0.15
USP40-212ENST00000473191 SAMD4AQ9UPU9 718 aaKnown RBP14.11□□□□□ -0.15
USP40-212ENST00000473191 AURKCQ9UQB9 309 aa14.11□□□□□ -0.15
USP40-212ENST00000473191 ARHGAP32A7KAX9 2087 aa14.11□□□□□ -0.15
USP40-212ENST00000473191 ANK2Q01484 3957 aa14.11□□□□□ -0.15
USP40-212ENST00000473191 OR6C6A6NF89 314 aa14.1□□□□□ -0.15
USP40-212ENST00000473191 NDUFAB1O14561 156 aa14.1□□□□□ -0.15
USP40-212ENST00000473191 TCF21O43680 179 aa14.1□□□□□ -0.15
USP40-212ENST00000473191 TIMM8AO60220 97 aaPredicted RBP14.1□□□□□ -0.15
USP40-212ENST00000473191 KHDRBS3O75525 346 aaKnown RBP14.1□□□□□ -0.15
USP40-212ENST00000473191 MT-ND5P03915 603 aa14.1□□□□□ -0.15
USP40-212ENST00000473191 COX5BP10606 129 aa14.1□□□□□ -0.15
USP40-212ENST00000473191 ADRA2CP18825 462 aa14.1□□□□□ -0.15
USP40-212ENST00000473191 PRSS12P56730 875 aa14.1□□□□□ -0.15
USP40-212ENST00000473191 SPIBQ01892 262 aa14.1□□□□□ -0.15
USP40-212ENST00000473191 TEKQ02763 1124 aa14.1□□□□□ -0.15
USP40-212ENST00000473191 SCRN3Q0VDG4 424 aa14.1□□□□□ -0.15
USP40-212ENST00000473191 HLXQ14774 488 aaPredicted RBP14.1□□□□□ -0.15
USP40-212ENST00000473191 MTX3Q5HYI7 312 aa14.1□□□□□ -0.15
USP40-212ENST00000473191 CORO6Q6QEF8 472 aa14.1□□□□□ -0.15
USP40-212ENST00000473191 GLB1L2Q8IW92 636 aa14.1□□□□□ -0.15
USP40-212ENST00000473191 RFLNBQ8N5W9 214 aa14.1□□□□□ -0.15
USP40-212ENST00000473191 ELMOD3Q96FG2 381 aa14.1□□□□□ -0.15
USP40-212ENST00000473191 DCLRE1CQ96SD1 692 aaKnown RBP14.1□□□□□ -0.15
USP40-212ENST00000473191 TMPRSS13Q9BYE2 586 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms