RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 TNFAIP6P98066 277 aaPredicted RBP16.74■□□□□ 0.27
COL9A3-210ENST00000472880 LIPEQ05469 1076 aa16.74■□□□□ 0.27
COL9A3-210ENST00000472880 SCRN3Q0VDG4 424 aa16.74■□□□□ 0.27
COL9A3-210ENST00000472880 FHL1Q13642 323 aa16.74■□□□□ 0.27
COL9A3-210ENST00000472880 MBOAT2Q6ZWT7 520 aa16.74■□□□□ 0.27
COL9A3-210ENST00000472880 FKBP9P1Q75LS8 142 aa16.74■□□□□ 0.27
COL9A3-210ENST00000472880 RRM2BQ7LG56 351 aa16.74■□□□□ 0.27
COL9A3-210ENST00000472880 NANPQ8TBE9 248 aa16.74■□□□□ 0.27
COL9A3-210ENST00000472880 ST7LQ8TDW4 575 aa16.74■□□□□ 0.27
COL9A3-210ENST00000472880 ZNF570Q96NI8 536 aa16.74■□□□□ 0.27
COL9A3-210ENST00000472880 ELAC2Q9BQ52 826 aaKnown RBP16.74■□□□□ 0.27
COL9A3-210ENST00000472880 SUCNR1Q9BXA5 334 aa16.74■□□□□ 0.27
COL9A3-210ENST00000472880 EMC7Q9NPA0 242 aa16.74■□□□□ 0.27
COL9A3-210ENST00000472880 GMPR2Q9P2T1 348 aaKnown RBP16.74■□□□□ 0.27
COL9A3-210ENST00000472880 ADAM18Q9Y3Q7 739 aa16.74■□□□□ 0.27
COL9A3-210ENST00000472880 A0A087WUU8 490 aa16.73■□□□□ 0.27
COL9A3-210ENST00000472880 FFAR1O14842 300 aa16.73■□□□□ 0.27
COL9A3-210ENST00000472880 COX5BP10606 129 aa16.73■□□□□ 0.27
COL9A3-210ENST00000472880 ADRA2CP18825 462 aa16.73■□□□□ 0.27
COL9A3-210ENST00000472880 CFPP27918 469 aa16.73■□□□□ 0.27
COL9A3-210ENST00000472880 LCN2P80188 198 aa16.73■□□□□ 0.27
COL9A3-210ENST00000472880 CYP4Z1Q86W10 505 aa16.73■□□□□ 0.27
COL9A3-210ENST00000472880 TREML1Q86YW5 311 aa16.73■□□□□ 0.27
COL9A3-210ENST00000472880 SLC15A3Q8IY34 581 aa16.73■□□□□ 0.27
COL9A3-210ENST00000472880 FAM156AQ8NDB6 213 aa16.73■□□□□ 0.27
COL9A3-210ENST00000472880 RP9Q8TA86 221 aaKnown RBP16.73■□□□□ 0.27
COL9A3-210ENST00000472880 FAM216AQ8WUB2 273 aa16.73■□□□□ 0.27
COL9A3-210ENST00000472880 HSH2DQ96JZ2 352 aa16.73■□□□□ 0.27
COL9A3-210ENST00000472880 RBM4Q9BWF3 364 aaKnown RBP16.73■□□□□ 0.27
COL9A3-210ENST00000472880 TMEM5Q9Y2B1 443 aa16.73■□□□□ 0.27
COL9A3-210ENST00000472880 NBEAL1Q6ZS30 2694 aa16.72■□□□□ 0.27
COL9A3-210ENST00000472880 CDC42EP2O14613 210 aa16.72■□□□□ 0.27
COL9A3-210ENST00000472880 SGCEO43556 437 aa16.72■□□□□ 0.27
COL9A3-210ENST00000472880 SERPINA1P01009 418 aa16.72■□□□□ 0.27
COL9A3-210ENST00000472880 SCG5P05408 212 aa16.72■□□□□ 0.27
COL9A3-210ENST00000472880 CD14P08571 375 aa16.72■□□□□ 0.27
COL9A3-210ENST00000472880 TNFSF4P23510 183 aa16.72■□□□□ 0.27
COL9A3-210ENST00000472880 SLC7A2P52569 658 aa16.72■□□□□ 0.27
COL9A3-210ENST00000472880 GYS2P54840 703 aa16.72■□□□□ 0.27
COL9A3-210ENST00000472880 PSG7Q13046 419 aa16.72■□□□□ 0.27
COL9A3-210ENST00000472880 ZBED5Q49AG3 693 aa16.72■□□□□ 0.27
COL9A3-210ENST00000472880 MESTQ5EB52 335 aa16.72■□□□□ 0.27
COL9A3-210ENST00000472880 TBPL2Q6SJ96 375 aa16.72■□□□□ 0.27
COL9A3-210ENST00000472880 TMPRSS11FQ6ZWK6 438 aa16.72■□□□□ 0.27
COL9A3-210ENST00000472880 CBLL1Q75N03 491 aa16.72■□□□□ 0.27
COL9A3-210ENST00000472880 BPIFB2Q8N4F0 458 aa16.72■□□□□ 0.27
COL9A3-210ENST00000472880 GCDHQ92947 438 aaPredicted RBP16.72■□□□□ 0.27
COL9A3-210ENST00000472880 Q96M85 177 aa16.72■□□□□ 0.27
COL9A3-210ENST00000472880 FAM107BQ9H098 131 aa16.72■□□□□ 0.27
COL9A3-210ENST00000472880 NSRP1Q9H0G5 558 aaKnown RBP16.72■□□□□ 0.27
COL9A3-210ENST00000472880 C7orf69Q9H7B7 122 aa16.72■□□□□ 0.27
COL9A3-210ENST00000472880 TBCCD1Q9NVR7 557 aa16.72■□□□□ 0.27
COL9A3-210ENST00000472880 KLHL21Q9UJP4 597 aa16.72■□□□□ 0.27
COL9A3-210ENST00000472880 NPTNQ9Y639 398 aa16.72■□□□□ 0.27
COL9A3-210ENST00000472880 TEX13CA0A0J9YWL9 993 aa16.71■□□□□ 0.27
COL9A3-210ENST00000472880 PRSS37A4D1T9 235 aa16.71■□□□□ 0.27
COL9A3-210ENST00000472880 NME4O00746 187 aa16.71■□□□□ 0.27
COL9A3-210ENST00000472880 DYNC1I1O14576 645 aa16.71■□□□□ 0.27
COL9A3-210ENST00000472880 AHCYL1O43865 530 aa16.71■□□□□ 0.27
COL9A3-210ENST00000472880 PRSS23O95084 383 aa16.71■□□□□ 0.27
COL9A3-210ENST00000472880 COX4I1P13073 169 aa16.71■□□□□ 0.27
COL9A3-210ENST00000472880 TUBG1P23258 451 aa16.71■□□□□ 0.27
COL9A3-210ENST00000472880 CDK5R2Q13319 367 aa16.71■□□□□ 0.27
COL9A3-210ENST00000472880 KRR1Q13601 381 aaKnown RBP16.71■□□□□ 0.27
COL9A3-210ENST00000472880 SPRNQ5BIV9 151 aa16.71■□□□□ 0.27
COL9A3-210ENST00000472880 FAM162AQ96A26 154 aa16.71■□□□□ 0.27
COL9A3-210ENST00000472880 SLC6A7Q99884 636 aa16.71■□□□□ 0.27
COL9A3-210ENST00000472880 POFUT1Q9H488 388 aa16.71■□□□□ 0.27
COL9A3-210ENST00000472880 ANKRD19PQ9H560 264 aa16.71■□□□□ 0.27
COL9A3-210ENST00000472880 TUBG2Q9NRH3 451 aa16.71■□□□□ 0.27
COL9A3-210ENST00000472880 PLEK2Q9NYT0 353 aa16.71■□□□□ 0.27
COL9A3-210ENST00000472880 PURGQ9UJV8 347 aaKnown RBP16.71■□□□□ 0.27
COL9A3-210ENST00000472880 SNX3O60493 162 aa16.7■□□□□ 0.26
COL9A3-210ENST00000472880 FOXH1O75593 365 aa16.7■□□□□ 0.26
COL9A3-210ENST00000472880 IGHV2-70P01814 119 aa16.7■□□□□ 0.26
COL9A3-210ENST00000472880 SBK2P0C263 348 aa16.7■□□□□ 0.26
COL9A3-210ENST00000472880 TNFRSF1AP19438 455 aa16.7■□□□□ 0.26
COL9A3-210ENST00000472880 LIMS1P48059 325 aa16.7■□□□□ 0.26
COL9A3-210ENST00000472880 GNGT1P63211 74 aa16.7■□□□□ 0.26
COL9A3-210ENST00000472880 AQP6Q13520 282 aa16.7■□□□□ 0.26
COL9A3-210ENST00000472880 VASH1Q7L8A9 365 aaPredicted RBP16.7■□□□□ 0.26
COL9A3-210ENST00000472880 FAM122BQ7Z309 247 aa16.7■□□□□ 0.26
COL9A3-210ENST00000472880 SPICQ8N5J4 248 aa16.7■□□□□ 0.26
COL9A3-210ENST00000472880 OR2Z1Q8NG97 314 aa16.7■□□□□ 0.26
COL9A3-210ENST00000472880 FAM46AQ96IP4 442 aaKnown RBP16.7■□□□□ 0.26
COL9A3-210ENST00000472880 COG8Q96MW5 612 aa16.7■□□□□ 0.26
COL9A3-210ENST00000472880 DCLRE1CQ96SD1 692 aaKnown RBP16.7■□□□□ 0.26
COL9A3-210ENST00000472880 HOPXQ9BPY8 73 aaPredicted RBP16.7■□□□□ 0.26
COL9A3-210ENST00000472880 RERGLQ9H628 205 aa16.7■□□□□ 0.26
COL9A3-210ENST00000472880 TMEM106BQ9NUM4 274 aa16.7■□□□□ 0.26
COL9A3-210ENST00000472880 NDUFB2O95178 105 aa16.69■□□□□ 0.26
COL9A3-210ENST00000472880 CTLA4P16410 223 aa16.69■□□□□ 0.26
COL9A3-210ENST00000472880 ZNF26P17031 533 aaPredicted RBP16.69■□□□□ 0.26
COL9A3-210ENST00000472880 KITLGP21583 273 aa16.69■□□□□ 0.26
COL9A3-210ENST00000472880 SDHAP31040 664 aa16.69■□□□□ 0.26
COL9A3-210ENST00000472880 COMPP49747 757 aaPredicted RBP16.69■□□□□ 0.26
COL9A3-210ENST00000472880 GSK3BP49841 420 aa16.69■□□□□ 0.26
COL9A3-210ENST00000472880 CPLX4Q7Z7G2 160 aa16.69■□□□□ 0.26
COL9A3-210ENST00000472880 KLHL36Q8N4N3 616 aa16.69■□□□□ 0.26
COL9A3-210ENST00000472880 C3orf56Q8N813 242 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms