RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 C5orf63A6NC05 138 aa7.33□□□□□ -1.24
GTF3A-206ENST00000470606 ZNF724A8MTY0 619 aa7.33□□□□□ -1.24
GTF3A-206ENST00000470606 PIN1P1O15428 100 aa7.33□□□□□ -1.24
GTF3A-206ENST00000470606 DOK2O60496 412 aa7.33□□□□□ -1.24
GTF3A-206ENST00000470606 SYNGR4O95473 234 aa7.33□□□□□ -1.24
GTF3A-206ENST00000470606 KRT8P05787 483 aa7.33□□□□□ -1.24
GTF3A-206ENST00000470606 PATE4P0C8F1 98 aa7.33□□□□□ -1.24
GTF3A-206ENST00000470606 ZNF823P16415 610 aa7.33□□□□□ -1.24
GTF3A-206ENST00000470606 SDC2P34741 201 aa7.33□□□□□ -1.24
GTF3A-206ENST00000470606 PLA2G5P39877 138 aa7.33□□□□□ -1.24
GTF3A-206ENST00000470606 GBX2P52951 348 aaPredicted RBP7.33□□□□□ -1.24
GTF3A-206ENST00000470606 CAV3P56539 151 aa7.33□□□□□ -1.24
GTF3A-206ENST00000470606 TMPRSS3P57727 454 aa7.33□□□□□ -1.24
GTF3A-206ENST00000470606 CXADRP78310 365 aa7.33□□□□□ -1.24
GTF3A-206ENST00000470606 GUSBP1Q15486 140 aa7.33□□□□□ -1.24
GTF3A-206ENST00000470606 SGCAQ16586 387 aa7.33□□□□□ -1.24
GTF3A-206ENST00000470606 CEACAM16Q2WEN9 425 aa7.33□□□□□ -1.24
GTF3A-206ENST00000470606 CCDC58Q4VC31 144 aa7.33□□□□□ -1.24
GTF3A-206ENST00000470606 WDR38Q5JTN6 314 aa7.33□□□□□ -1.24
GTF3A-206ENST00000470606 RPUSD3Q6P087 351 aaKnown RBP7.33□□□□□ -1.24
GTF3A-206ENST00000470606 GDPGP1Q6ZNW5 385 aa7.33□□□□□ -1.24
GTF3A-206ENST00000470606 SEM1Q6ZVN7 128 aa7.33□□□□□ -1.24
GTF3A-206ENST00000470606 KCTD20Q7Z5Y7 419 aa7.33□□□□□ -1.24
GTF3A-206ENST00000470606 SYT9Q86SS6 491 aa7.33□□□□□ -1.24
GTF3A-206ENST00000470606 LRRC18Q8N456 261 aa7.33□□□□□ -1.24
GTF3A-206ENST00000470606 ZNF454Q8N9F8 522 aa7.33□□□□□ -1.24
GTF3A-206ENST00000470606 SLAMF6Q96DU3 332 aa7.33□□□□□ -1.24
GTF3A-206ENST00000470606 SH3GL3Q99963 347 aa7.33□□□□□ -1.24
GTF3A-206ENST00000470606 TTYH2Q9BSA4 534 aa7.33□□□□□ -1.24
GTF3A-206ENST00000470606 TPK1Q9H3S4 243 aa7.33□□□□□ -1.24
GTF3A-206ENST00000470606 GPR35Q9HC97 309 aa7.33□□□□□ -1.24
GTF3A-206ENST00000470606 PAQR5Q9NXK6 330 aaPredicted RBP7.33□□□□□ -1.24
GTF3A-206ENST00000470606 SSR3Q9UNL2 185 aa7.33□□□□□ -1.24
GTF3A-206ENST00000470606 NOSIPQ9Y314 301 aaKnown RBP7.33□□□□□ -1.24
GTF3A-206ENST00000470606 A0A1W2PPK0 400 aa7.32□□□□□ -1.24
GTF3A-206ENST00000470606 ZNF503-AS2A6NEH8 195 aa7.32□□□□□ -1.24
GTF3A-206ENST00000470606 SLC22A20A6NK97 555 aa7.32□□□□□ -1.24
GTF3A-206ENST00000470606 E9PLN8 166 aa7.32□□□□□ -1.24
GTF3A-206ENST00000470606 H3BSH0 61 aa7.32□□□□□ -1.24
GTF3A-206ENST00000470606 SLC43A1O75387 559 aa7.32□□□□□ -1.24
GTF3A-206ENST00000470606 HLA-DPB1P04440 258 aa7.32□□□□□ -1.24
GTF3A-206ENST00000470606 YES1P07947 543 aa7.32□□□□□ -1.24
GTF3A-206ENST00000470606 INHBBP09529 407 aa7.32□□□□□ -1.24
GTF3A-206ENST00000470606 B4GALT1P15291 398 aa7.32□□□□□ -1.24
GTF3A-206ENST00000470606 MSR1P21757 451 aa7.32□□□□□ -1.24
GTF3A-206ENST00000470606 AGTR1P30556 359 aa7.32□□□□□ -1.24
GTF3A-206ENST00000470606 TAS2R43P59537 309 aa7.32□□□□□ -1.24
GTF3A-206ENST00000470606 MRPS34P82930 218 aaKnown RBP7.32□□□□□ -1.24
GTF3A-206ENST00000470606 MXD1Q05195 221 aa7.32□□□□□ -1.24
GTF3A-206ENST00000470606 ALKBH1Q13686 389 aaKnown RBP7.32□□□□□ -1.24
GTF3A-206ENST00000470606 ODF4Q2M2E3 257 aa7.32□□□□□ -1.24
GTF3A-206ENST00000470606 TIMM50Q3ZCQ8 353 aa7.32□□□□□ -1.24
GTF3A-206ENST00000470606 PRR30Q53SZ7 412 aaPredicted RBP7.32□□□□□ -1.24
GTF3A-206ENST00000470606 RIPPLY2Q5TAB7 128 aa7.32□□□□□ -1.24
GTF3A-206ENST00000470606 RTL6Q6ICC9 239 aa7.32□□□□□ -1.24
GTF3A-206ENST00000470606 FDX2Q6P4F2 183 aa7.32□□□□□ -1.24
GTF3A-206ENST00000470606 USP43Q70EL4 1123 aa7.32□□□□□ -1.24
GTF3A-206ENST00000470606 GCNT2Q8N0V5 402 aa7.32□□□□□ -1.24
GTF3A-206ENST00000470606 RPRMLQ8N4K4 120 aa7.32□□□□□ -1.24
GTF3A-206ENST00000470606 C9orf106Q8NAJ2 232 aa7.32□□□□□ -1.24
GTF3A-206ENST00000470606 FNDC8Q8TC99 324 aa7.32□□□□□ -1.24
GTF3A-206ENST00000470606 ASB17Q8WXJ9 295 aa7.32□□□□□ -1.24
GTF3A-206ENST00000470606 SLC7A6Q92536 515 aa7.32□□□□□ -1.24
GTF3A-206ENST00000470606 INTS12Q96CB8 462 aaKnown RBP7.32□□□□□ -1.24
GTF3A-206ENST00000470606 C4orf45Q96LM5 186 aa7.32□□□□□ -1.24
GTF3A-206ENST00000470606 OR14A2Q96R54 314 aa7.32□□□□□ -1.24
GTF3A-206ENST00000470606 MROQ9BYG7 248 aa7.32□□□□□ -1.24
GTF3A-206ENST00000470606 SLCO5A1Q9H2Y9 848 aa7.32□□□□□ -1.24
GTF3A-206ENST00000470606 NELFAQ9H3P2 528 aa7.32□□□□□ -1.24
GTF3A-206ENST00000470606 G6PC2Q9NQR9 355 aa7.32□□□□□ -1.24
GTF3A-206ENST00000470606 TMEM38BQ9NVV0 291 aa7.32□□□□□ -1.24
GTF3A-206ENST00000470606 ZNF224Q9NZL3 707 aa7.32□□□□□ -1.24
GTF3A-206ENST00000470606 PRSS50Q9UI38 385 aa7.32□□□□□ -1.24
GTF3A-206ENST00000470606 CADP27708 2225 aa7.32□□□□□ -1.24
GTF3A-206ENST00000470606 EPG5Q9HCE0 2579 aa7.32□□□□□ -1.24
GTF3A-206ENST00000470606 ANKRD61A6NGH8 418 aa7.31□□□□□ -1.24
GTF3A-206ENST00000470606 VGLL3A8MV65 326 aa7.31□□□□□ -1.24
GTF3A-206ENST00000470606 GPR171O14626 319 aa7.31□□□□□ -1.24
GTF3A-206ENST00000470606 MRPL33O75394 65 aaKnown RBP7.31□□□□□ -1.24
GTF3A-206ENST00000470606 RGS9O75916 674 aaPredicted RBP7.31□□□□□ -1.24
GTF3A-206ENST00000470606 CLPXO76031 633 aa7.31□□□□□ -1.24
GTF3A-206ENST00000470606 NCR1O76036 304 aa7.31□□□□□ -1.24
GTF3A-206ENST00000470606 CDRT1O95170 752 aa7.31□□□□□ -1.24
GTF3A-206ENST00000470606 CD1AP06126 327 aa7.31□□□□□ -1.24
GTF3A-206ENST00000470606 CD53P19397 219 aa7.31□□□□□ -1.24
GTF3A-206ENST00000470606 LSM6P62312 80 aaKnown RBP7.31□□□□□ -1.24
GTF3A-206ENST00000470606 HIST1H3AP68431 136 aa7.31□□□□□ -1.24
GTF3A-206ENST00000470606 ROR2Q01974 943 aaKnown RBP7.31□□□□□ -1.24
GTF3A-206ENST00000470606 RNPS1Q15287 305 aaKnown RBP7.31□□□□□ -1.24
GTF3A-206ENST00000470606 ACSM3Q53FZ2 586 aa7.31□□□□□ -1.24
GTF3A-206ENST00000470606 CCDC92Q53HC0 331 aaPredicted RBP7.31□□□□□ -1.24
GTF3A-206ENST00000470606 HIST2H3PS2Q5TEC6 136 aa7.31□□□□□ -1.24
GTF3A-206ENST00000470606 FAM27BQ5VT28 67 aa7.31□□□□□ -1.24
GTF3A-206ENST00000470606 C9orf135Q5VTT2 229 aa7.31□□□□□ -1.24
GTF3A-206ENST00000470606 ASPHD2Q6ICH7 369 aa7.31□□□□□ -1.24
GTF3A-206ENST00000470606 UNQ9370/PRO34162Q6UXP9 181 aa7.31□□□□□ -1.24
GTF3A-206ENST00000470606 HIST2H3AQ71DI3 136 aa7.31□□□□□ -1.24
GTF3A-206ENST00000470606 KRT77Q7Z794 578 aa7.31□□□□□ -1.24
GTF3A-206ENST00000470606 NAA40Q86UY6 237 aa7.31□□□□□ -1.24
GTF3A-206ENST00000470606 CATSPERDQ86XM0 798 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms