RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 FKBP6O75344 327 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 AQP8O94778 261 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 SCELO95171 688 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 CD160O95971 181 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 GIPP09681 153 aaPredicted RBP2.37□□□□□ -2.03
BRCA2-202ENST00000470094 CALM1P0DP23 149 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 CALM2P0DP24 149 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 CALM3P0DP25 149 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 ZNF250P15622 560 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 CTRB1P17538 263 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 U2AF2P26368 475 aaKnown RBP eCLIP2.37□□□□□ -2.03
BRCA2-202ENST00000470094 OR1E1P30953 314 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 HRH1P35367 487 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 GPX4P36969 197 aaPredicted RBP2.37□□□□□ -2.03
BRCA2-202ENST00000470094 TNFSF9P41273 254 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 LHX2P50458 406 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 STXBP1P61764 594 aaKnown RBP2.37□□□□□ -2.03
BRCA2-202ENST00000470094 RPS21P63220 83 aaKnown RBP2.37□□□□□ -2.03
BRCA2-202ENST00000470094 MXD1Q05195 221 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 C16orf72Q14CZ0 275 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 OR7A5Q15622 319 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 PSMD5Q16401 504 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 RFX4Q33E94 735 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 H3F3CQ6NXT2 135 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 TMEM179Q6ZVK1 233 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 TMEM150AQ86TG1 271 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 LINC01551Q86U37 167 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 PDCL2Q8N4E4 241 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 NPBQ8NG41 125 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 OR51G1Q8NGK1 321 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 OR2A1Q8NGT9 310 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 ACER1Q8TDN7 264 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 TOP1MTQ969P6 601 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 ECHDC3Q96DC8 303 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 C9orf72Q96LT7 481 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 SERPINB12Q96P63 405 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 GABARAPL3Q9BY60 117 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 SLC17A9Q9BYT1 436 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 OR2AG1Q9H205 316 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 FBXO44Q9H4M3 255 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 BEX1Q9HBH7 125 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 STOX2Q9P2F5 926 aaPredicted RBP2.37□□□□□ -2.03
BRCA2-202ENST00000470094 TRAPPC4Q9Y296 219 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 KCNE3Q9Y6H6 103 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 UBN2Q6ZU65 1347 aa2.37□□□□□ -2.03
BRCA2-202ENST00000470094 IGKV2-28A0A075B6P5 120 aa2.36□□□□□ -2.03
BRCA2-202ENST00000470094 A0A1W2PRD5 423 aa2.36□□□□□ -2.03
BRCA2-202ENST00000470094 TMEM120BA0PK00 339 aa2.36□□□□□ -2.03
BRCA2-202ENST00000470094 ZNF99A8MXY4 864 aaPredicted RBP2.36□□□□□ -2.03
BRCA2-202ENST00000470094 H7C0C1 242 aa2.36□□□□□ -2.03
BRCA2-202ENST00000470094 M0QX08 132 aa2.36□□□□□ -2.03
BRCA2-202ENST00000470094 SLC9A3R1O14745 358 aaPredicted RBP2.36□□□□□ -2.03
BRCA2-202ENST00000470094 NUPL2O15504 423 aaKnown RBP2.36□□□□□ -2.03
BRCA2-202ENST00000470094 RAD51CO43502 376 aa2.36□□□□□ -2.03
BRCA2-202ENST00000470094 SRP72O76094 671 aaKnown RBP2.36□□□□□ -2.03
BRCA2-202ENST00000470094 IGKV2D-28P01615 120 aa2.36□□□□□ -2.03
BRCA2-202ENST00000470094 HBE1P02100 147 aa2.36□□□□□ -2.03
BRCA2-202ENST00000470094 ARG1P05089 322 aa2.36□□□□□ -2.03
BRCA2-202ENST00000470094 PCCAP05165 728 aaPredicted RBP2.36□□□□□ -2.03
BRCA2-202ENST00000470094 CLTAP09496 248 aa2.36□□□□□ -2.03
BRCA2-202ENST00000470094 NBL1P41271 181 aa2.36□□□□□ -2.03
BRCA2-202ENST00000470094 UBE2MP61081 183 aaKnown RBP2.36□□□□□ -2.03
BRCA2-202ENST00000470094 TWF1Q12792 350 aa2.36□□□□□ -2.03
BRCA2-202ENST00000470094 GGTLC2Q14390 218 aa2.36□□□□□ -2.03
BRCA2-202ENST00000470094 GUCA2BQ16661 112 aa2.36□□□□□ -2.03
BRCA2-202ENST00000470094 ZBED5Q49AG3 693 aa2.36□□□□□ -2.03
BRCA2-202ENST00000470094 COA6Q5JTJ3 125 aaKnown RBP2.36□□□□□ -2.03
BRCA2-202ENST00000470094 FRMPD2BQ6IN97 320 aa2.36□□□□□ -2.03
BRCA2-202ENST00000470094 LINC00173Q6ZV60 143 aa2.36□□□□□ -2.03
BRCA2-202ENST00000470094 H2AFVQ71UI9 128 aa2.36□□□□□ -2.03
BRCA2-202ENST00000470094 CBLN2Q8IUK8 224 aa2.36□□□□□ -2.03
BRCA2-202ENST00000470094 CMTM8Q8IZV2 173 aa2.36□□□□□ -2.03
BRCA2-202ENST00000470094 INO80EQ8NBZ0 244 aaPredicted RBP2.36□□□□□ -2.03
BRCA2-202ENST00000470094 NAT6Q93015 286 aa2.36□□□□□ -2.03
BRCA2-202ENST00000470094 AURKBQ96GD4 344 aaPredicted RBP2.36□□□□□ -2.03
BRCA2-202ENST00000470094 OR2M2Q96R28 347 aa2.36□□□□□ -2.03
BRCA2-202ENST00000470094 MRPL37Q9BZE1 423 aaKnown RBP2.36□□□□□ -2.03
BRCA2-202ENST00000470094 TMEM38AQ9H6F2 299 aa2.36□□□□□ -2.03
BRCA2-202ENST00000470094 SLCO1B3Q9NPD5 702 aa2.36□□□□□ -2.03
BRCA2-202ENST00000470094 ACP6Q9NPH0 428 aa2.36□□□□□ -2.03
BRCA2-202ENST00000470094 KCNJ16Q9NPI9 418 aa2.36□□□□□ -2.03
BRCA2-202ENST00000470094 AGPAT4Q9NRZ5 378 aa2.36□□□□□ -2.03
BRCA2-202ENST00000470094 CLN6Q9NWW5 311 aa2.36□□□□□ -2.03
BRCA2-202ENST00000470094 ZNF629Q9UEG4 869 aaPredicted RBP2.36□□□□□ -2.03
BRCA2-202ENST00000470094 ST3GAL6Q9Y274 331 aa2.36□□□□□ -2.03
BRCA2-202ENST00000470094 F11RQ9Y624 299 aaKnown RBP2.36□□□□□ -2.03
BRCA2-202ENST00000470094 CEMIPQ8WUJ3 1361 aa2.36□□□□□ -2.03
BRCA2-202ENST00000470094 KIF27Q86VH2 1401 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 IGLV4-69A0A075B6H9 119 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.35□□□□□ -2.03
BRCA2-202ENST00000470094 A0A0J9YYE9 177 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 A0A1B0GUH1 482 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 SERPINE3A8MV23 424 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 SMKR1H3BMG3 65 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 NDUFS8O00217 210 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 PES1O00541 588 aaKnown RBP2.35□□□□□ -2.03
BRCA2-202ENST00000470094 XKRYO14609 159 aa2.35□□□□□ -2.03
BRCA2-202ENST00000470094 ZNF324O75467 553 aaPredicted RBP2.35□□□□□ -2.03
BRCA2-202ENST00000470094 WISP3O95389 354 aaPredicted RBP2.35□□□□□ -2.03
BRCA2-202ENST00000470094 SLC25A27O95847 323 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms