RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 SCRN3Q0VDG4 424 aa18.52■□□□□ 0.56
TTC28-204ENST00000468807 KRT72Q14CN4 511 aa18.52■□□□□ 0.56
TTC28-204ENST00000468807 FAM209AQ5JX71 171 aa18.52■□□□□ 0.56
TTC28-204ENST00000468807 OTPQ5XKR4 325 aa18.52■□□□□ 0.56
TTC28-204ENST00000468807 TSEN54Q7Z6J9 526 aaKnown RBP18.52■□□□□ 0.56
TTC28-204ENST00000468807 SYT9Q86SS6 491 aa18.52■□□□□ 0.56
TTC28-204ENST00000468807 C1orf174Q8IYL3 243 aa18.52■□□□□ 0.56
TTC28-204ENST00000468807 OR52J3Q8NH60 311 aa18.52■□□□□ 0.56
TTC28-204ENST00000468807 CYSLTR2Q9NS75 346 aa18.52■□□□□ 0.56
TTC28-204ENST00000468807 NDUFAF4Q9P032 175 aa18.52■□□□□ 0.56
TTC28-204ENST00000468807 METRNQ9UJH8 293 aa18.52■□□□□ 0.56
TTC28-204ENST00000468807 SAMD4AQ9UPU9 718 aaKnown RBP18.52■□□□□ 0.56
TTC28-204ENST00000468807 AURKCQ9UQB9 309 aa18.52■□□□□ 0.56
TTC28-204ENST00000468807 WIPI2Q9Y4P8 454 aa18.52■□□□□ 0.56
TTC28-204ENST00000468807 A0A1W2PRQ8 180 aa18.51■□□□□ 0.55
TTC28-204ENST00000468807 ISPDA4D126 451 aa18.51■□□□□ 0.55
TTC28-204ENST00000468807 SOCS2O14508 198 aa18.51■□□□□ 0.55
TTC28-204ENST00000468807 SLC16A7O60669 478 aa18.51■□□□□ 0.55
TTC28-204ENST00000468807 ANPEPP15144 967 aa18.51■□□□□ 0.55
TTC28-204ENST00000468807 CTLA4P16410 223 aa18.51■□□□□ 0.55
TTC28-204ENST00000468807 RHCEP18577 417 aa18.51■□□□□ 0.55
TTC28-204ENST00000468807 DGCR6Q14129 220 aa18.51■□□□□ 0.55
TTC28-204ENST00000468807 ACSM5Q6NUN0 579 aa18.51■□□□□ 0.55
TTC28-204ENST00000468807 THSD4Q6ZMP0 1018 aa18.51■□□□□ 0.55
TTC28-204ENST00000468807 FAM122BQ7Z309 247 aa18.51■□□□□ 0.55
TTC28-204ENST00000468807 FAM156AQ8NDB6 213 aa18.51■□□□□ 0.55
TTC28-204ENST00000468807 RAB1CQ92928 201 aa18.51■□□□□ 0.55
TTC28-204ENST00000468807 RAB39BQ96DA2 213 aa18.51■□□□□ 0.55
TTC28-204ENST00000468807 RSRC1Q96IZ7 334 aaKnown RBP18.51■□□□□ 0.55
TTC28-204ENST00000468807 SYT4Q9H2B2 425 aa18.51■□□□□ 0.55
TTC28-204ENST00000468807 MSL2Q9HCI7 577 aa18.51■□□□□ 0.55
TTC28-204ENST00000468807 KRCC1Q9NPI7 259 aaPredicted RBP18.51■□□□□ 0.55
TTC28-204ENST00000468807 SIGLEC7Q9Y286 467 aa18.51■□□□□ 0.55
TTC28-204ENST00000468807 TRAV20A0A0B4J274 112 aa18.5■□□□□ 0.55
TTC28-204ENST00000468807 TRBV4-1A0A0J9YWV2 114 aa18.5■□□□□ 0.55
TTC28-204ENST00000468807 SGCEO43556 437 aa18.5■□□□□ 0.55
TTC28-204ENST00000468807 AHCYL1O43865 530 aa18.5■□□□□ 0.55
TTC28-204ENST00000468807 MPZL1O95297 269 aa18.5■□□□□ 0.55
TTC28-204ENST00000468807 ITGA2P17301 1181 aa18.5■□□□□ 0.55
TTC28-204ENST00000468807 SDHAP31040 664 aa18.5■□□□□ 0.55
TTC28-204ENST00000468807 LIPAP38571 399 aa18.5■□□□□ 0.55
TTC28-204ENST00000468807 CENPAP49450 140 aa18.5■□□□□ 0.55
TTC28-204ENST00000468807 ZMAT1Q5H9K5 638 aa18.5■□□□□ 0.55
TTC28-204ENST00000468807 C1orf94Q6P1W5 598 aa18.5■□□□□ 0.55
TTC28-204ENST00000468807 FAM86B1Q8N7N1 296 aa18.5■□□□□ 0.55
TTC28-204ENST00000468807 GAL3ST1Q99999 423 aa18.5■□□□□ 0.55
TTC28-204ENST00000468807 MYLK2Q9H1R3 596 aa18.5■□□□□ 0.55
TTC28-204ENST00000468807 DCAF13Q9NV06 445 aaKnown RBP18.5■□□□□ 0.55
TTC28-204ENST00000468807 PLEK2Q9NYT0 353 aa18.5■□□□□ 0.55
TTC28-204ENST00000468807 COA3Q9Y2R0 106 aaPredicted RBP18.5■□□□□ 0.55
TTC28-204ENST00000468807 IER3IP1Q9Y5U9 82 aa18.5■□□□□ 0.55
TTC28-204ENST00000468807 UNC119BA6NIH7 251 aa18.49■□□□□ 0.55
TTC28-204ENST00000468807 H3BSA7 217 aa18.49■□□□□ 0.55
TTC28-204ENST00000468807 IMPA2O14732 288 aa18.49■□□□□ 0.55
TTC28-204ENST00000468807 KHDRBS3O75525 346 aaKnown RBP18.49■□□□□ 0.55
TTC28-204ENST00000468807 COX5BP10606 129 aa18.49■□□□□ 0.55
TTC28-204ENST00000468807 GSTM3P21266 225 aa18.49■□□□□ 0.55
TTC28-204ENST00000468807 OMPP47874 163 aa18.49■□□□□ 0.55
TTC28-204ENST00000468807 LIMS1P48059 325 aa18.49■□□□□ 0.55
TTC28-204ENST00000468807 SEC23BQ15437 767 aa18.49■□□□□ 0.55
TTC28-204ENST00000468807 GPR139Q6DWJ6 353 aa18.49■□□□□ 0.55
TTC28-204ENST00000468807 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.49■□□□□ 0.55
TTC28-204ENST00000468807 NPEPL1Q8NDH3 523 aa18.49■□□□□ 0.55
TTC28-204ENST00000468807 WACQ9BTA9 647 aa18.49■□□□□ 0.55
TTC28-204ENST00000468807 NSRP1Q9H0G5 558 aaKnown RBP18.49■□□□□ 0.55
TTC28-204ENST00000468807 POFUT1Q9H488 388 aa18.49■□□□□ 0.55
TTC28-204ENST00000468807 NRIP3Q9NQ35 241 aa18.49■□□□□ 0.55
TTC28-204ENST00000468807 ASH2LQ9UBL3 628 aa18.49■□□□□ 0.55
TTC28-204ENST00000468807 CGGBP1Q9UFW8 167 aaPredicted RBP18.49■□□□□ 0.55
TTC28-204ENST00000468807 ZDHHC8Q9ULC8 765 aa18.49■□□□□ 0.55
TTC28-204ENST00000468807 POLR1DQ9Y2S0 133 aa18.49■□□□□ 0.55
TTC28-204ENST00000468807 ICMTO60725 284 aa18.48■□□□□ 0.55
TTC28-204ENST00000468807 PTP4A3O75365 173 aa18.48■□□□□ 0.55
TTC28-204ENST00000468807 PNPP00491 289 aa18.48■□□□□ 0.55
TTC28-204ENST00000468807 PRDX6P30041 224 aa18.48■□□□□ 0.55
TTC28-204ENST00000468807 RPS6KA3P51812 740 aa18.48■□□□□ 0.55
TTC28-204ENST00000468807 TNFAIP6P98066 277 aaPredicted RBP18.48■□□□□ 0.55
TTC28-204ENST00000468807 PSG7Q13046 419 aa18.48■□□□□ 0.55
TTC28-204ENST00000468807 AQP6Q13520 282 aa18.48■□□□□ 0.55
TTC28-204ENST00000468807 MTX3Q5HYI7 312 aa18.48■□□□□ 0.55
TTC28-204ENST00000468807 VASH1Q7L8A9 365 aaPredicted RBP18.48■□□□□ 0.55
TTC28-204ENST00000468807 ZER1Q7Z7L7 766 aa18.48■□□□□ 0.55
TTC28-204ENST00000468807 PEG10Q86TG7 708 aaKnown RBP18.48■□□□□ 0.55
TTC28-204ENST00000468807 GLB1L2Q8IW92 636 aa18.48■□□□□ 0.55
TTC28-204ENST00000468807 SLC7A6Q92536 515 aa18.48■□□□□ 0.55
TTC28-204ENST00000468807 C7orf34Q96L11 122 aa18.48■□□□□ 0.55
TTC28-204ENST00000468807 UBAP1Q9NZ09 502 aa18.48■□□□□ 0.55
TTC28-204ENST00000468807 WNK2Q9Y3S1 2297 aa18.48■□□□□ 0.55
TTC28-204ENST00000468807 HAX1O00165 279 aa18.47■□□□□ 0.55
TTC28-204ENST00000468807 PLPP2O43688 288 aa18.47■□□□□ 0.55
TTC28-204ENST00000468807 RGS9O75916 674 aaPredicted RBP18.47■□□□□ 0.55
TTC28-204ENST00000468807 UBOX5O94941 541 aa18.47■□□□□ 0.55
TTC28-204ENST00000468807 SPIBQ01892 262 aa18.47■□□□□ 0.55
TTC28-204ENST00000468807 SLC3A1Q07837 685 aa18.47■□□□□ 0.55
TTC28-204ENST00000468807 HNRNPA0Q13151 305 aaKnown RBP18.47■□□□□ 0.55
TTC28-204ENST00000468807 PTCHD4Q6ZW05 846 aa18.47■□□□□ 0.55
TTC28-204ENST00000468807 CPLX4Q7Z7G2 160 aa18.47■□□□□ 0.55
TTC28-204ENST00000468807 ADCK1Q86TW2 530 aa18.47■□□□□ 0.55
TTC28-204ENST00000468807 DIRC2Q96SL1 478 aa18.47■□□□□ 0.55
TTC28-204ENST00000468807 GPX7Q96SL4 187 aaPredicted RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms