RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 CTLA4P16410 223 aa20.71■□□□□ 0.91
PTCH1-210ENST00000468211 ZBED5Q49AG3 693 aa20.71■□□□□ 0.91
PTCH1-210ENST00000468211 C1orf174Q8IYL3 243 aa20.71■□□□□ 0.91
PTCH1-210ENST00000468211 FAM156AQ8NDB6 213 aa20.71■□□□□ 0.91
PTCH1-210ENST00000468211 OR4M2Q8NGB6 313 aa20.71■□□□□ 0.91
PTCH1-210ENST00000468211 SLC7A13Q8TCU3 470 aa20.71■□□□□ 0.91
PTCH1-210ENST00000468211 EGLN1Q9GZT9 426 aa20.71■□□□□ 0.91
PTCH1-210ENST00000468211 NMNAT1Q9HAN9 279 aaPredicted RBP20.71■□□□□ 0.91
PTCH1-210ENST00000468211 ISPDA4D126 451 aa20.7■□□□□ 0.9
PTCH1-210ENST00000468211 ABHD16AO95870 558 aa20.7■□□□□ 0.9
PTCH1-210ENST00000468211 CDK5R2Q13319 367 aa20.7■□□□□ 0.9
PTCH1-210ENST00000468211 MTX3Q5HYI7 312 aa20.7■□□□□ 0.9
PTCH1-210ENST00000468211 Q6ZR03 302 aa20.7■□□□□ 0.9
PTCH1-210ENST00000468211 C1QL2Q7Z5L3 287 aa20.7■□□□□ 0.9
PTCH1-210ENST00000468211 ZNF418Q8TF45 676 aaPredicted RBP20.7■□□□□ 0.9
PTCH1-210ENST00000468211 ZFAND2BQ8WV99 257 aa20.7■□□□□ 0.9
PTCH1-210ENST00000468211 SLC7A6Q92536 515 aa20.7■□□□□ 0.9
PTCH1-210ENST00000468211 RASD2Q96D21 266 aa20.7■□□□□ 0.9
PTCH1-210ENST00000468211 FAM46AQ96IP4 442 aaKnown RBP20.7■□□□□ 0.9
PTCH1-210ENST00000468211 UBAP1Q9NZ09 502 aa20.7■□□□□ 0.9
PTCH1-210ENST00000468211 CGGBP1Q9UFW8 167 aaPredicted RBP20.7■□□□□ 0.9
PTCH1-210ENST00000468211 OPN4Q9UHM6 478 aa20.7■□□□□ 0.9
PTCH1-210ENST00000468211 ZDHHC8Q9ULC8 765 aa20.7■□□□□ 0.9
PTCH1-210ENST00000468211 NDRG4Q9ULP0 352 aaKnown RBP20.7■□□□□ 0.9
PTCH1-210ENST00000468211 PCDHB10Q9UN67 800 aa20.7■□□□□ 0.9
PTCH1-210ENST00000468211 ENPP4Q9Y6X5 453 aa20.7■□□□□ 0.9
PTCH1-210ENST00000468211 PRSS37A4D1T9 235 aa20.69■□□□□ 0.9
PTCH1-210ENST00000468211 TIMM8AO60220 97 aaPredicted RBP20.69■□□□□ 0.9
PTCH1-210ENST00000468211 DOK2O60496 412 aa20.69■□□□□ 0.9
PTCH1-210ENST00000468211 PTP4A3O75365 173 aa20.69■□□□□ 0.9
PTCH1-210ENST00000468211 COX5BP10606 129 aa20.69■□□□□ 0.9
PTCH1-210ENST00000468211 LIPAP38571 399 aa20.69■□□□□ 0.9
PTCH1-210ENST00000468211 HTR5AP47898 357 aa20.69■□□□□ 0.9
PTCH1-210ENST00000468211 ARHGDIAP52565 204 aa20.69■□□□□ 0.9
PTCH1-210ENST00000468211 HILS1P60008 231 aa20.69■□□□□ 0.9
PTCH1-210ENST00000468211 LCN2P80188 198 aa20.69■□□□□ 0.9
PTCH1-210ENST00000468211 TNFAIP6P98066 277 aaPredicted RBP20.69■□□□□ 0.9
PTCH1-210ENST00000468211 DCAF12L2Q5VW00 463 aa20.69■□□□□ 0.9
PTCH1-210ENST00000468211 C12orf54Q6X4T0 127 aa20.69■□□□□ 0.9
PTCH1-210ENST00000468211 VASH1Q7L8A9 365 aaPredicted RBP20.69■□□□□ 0.9
PTCH1-210ENST00000468211 ZNF570Q96NI8 536 aa20.69■□□□□ 0.9
PTCH1-210ENST00000468211 HOPXQ9BPY8 73 aaPredicted RBP20.69■□□□□ 0.9
PTCH1-210ENST00000468211 STARD10Q9Y365 291 aa20.69■□□□□ 0.9
PTCH1-210ENST00000468211 TEX13CA0A0J9YWL9 993 aa20.68■□□□□ 0.9
PTCH1-210ENST00000468211 SGCEO43556 437 aa20.68■□□□□ 0.9
PTCH1-210ENST00000468211 ZFP36P26651 326 aaKnown RBP20.68■□□□□ 0.9
PTCH1-210ENST00000468211 CFPP27918 469 aa20.68■□□□□ 0.9
PTCH1-210ENST00000468211 LIMS1P48059 325 aa20.68■□□□□ 0.9
PTCH1-210ENST00000468211 ERFP50548 548 aa20.68■□□□□ 0.9
PTCH1-210ENST00000468211 SCGB2A2Q13296 93 aa20.68■□□□□ 0.9
PTCH1-210ENST00000468211 DCLRE1CQ96SD1 692 aaKnown RBP20.68■□□□□ 0.9
PTCH1-210ENST00000468211 DIRC2Q96SL1 478 aa20.68■□□□□ 0.9
PTCH1-210ENST00000468211 TBCCD1Q9NVR7 557 aa20.68■□□□□ 0.9
PTCH1-210ENST00000468211 IL20RAQ9UHF4 553 aa20.68■□□□□ 0.9
PTCH1-210ENST00000468211 PURGQ9UJV8 347 aaKnown RBP20.68■□□□□ 0.9
PTCH1-210ENST00000468211 SIGLEC7Q9Y286 467 aa20.68■□□□□ 0.9
PTCH1-210ENST00000468211 J3QLI3 93 aa20.67■□□□□ 0.9
PTCH1-210ENST00000468211 XKRYO14609 159 aa20.67■□□□□ 0.9
PTCH1-210ENST00000468211 FXYD6P3P58550 94 aa20.67■□□□□ 0.9
PTCH1-210ENST00000468211 SLC3A1Q07837 685 aa20.67■□□□□ 0.9
PTCH1-210ENST00000468211 SCRN3Q0VDG4 424 aa20.67■□□□□ 0.9
PTCH1-210ENST00000468211 KRR1Q13601 381 aaKnown RBP20.67■□□□□ 0.9
PTCH1-210ENST00000468211 ARL9Q6T311 187 aa20.67■□□□□ 0.9
PTCH1-210ENST00000468211 PEG10Q86TG7 708 aaKnown RBP20.67■□□□□ 0.9
PTCH1-210ENST00000468211 FAM162AQ96A26 154 aa20.67■□□□□ 0.9
PTCH1-210ENST00000468211 CMBLQ96DG6 245 aa20.67■□□□□ 0.9
PTCH1-210ENST00000468211 SLC6A7Q99884 636 aa20.67■□□□□ 0.9
PTCH1-210ENST00000468211 WACQ9BTA9 647 aa20.67■□□□□ 0.9
PTCH1-210ENST00000468211 SYT4Q9H2B2 425 aa20.67■□□□□ 0.9
PTCH1-210ENST00000468211 ANKRD19PQ9H560 264 aa20.67■□□□□ 0.9
PTCH1-210ENST00000468211 RERGLQ9H628 205 aa20.67■□□□□ 0.9
PTCH1-210ENST00000468211 C7orf69Q9H7B7 122 aa20.67■□□□□ 0.9
PTCH1-210ENST00000468211 EFCAB1Q9HAE3 211 aa20.67■□□□□ 0.9
PTCH1-210ENST00000468211 COA3Q9Y2R0 106 aaPredicted RBP20.67■□□□□ 0.9
PTCH1-210ENST00000468211 NPTNQ9Y639 398 aa20.67■□□□□ 0.9
PTCH1-210ENST00000468211 AHCYL1O43865 530 aa20.66■□□□□ 0.9
PTCH1-210ENST00000468211 IGHV2-70P01814 119 aa20.66■□□□□ 0.9
PTCH1-210ENST00000468211 NUDT2P50583 147 aa20.66■□□□□ 0.9
PTCH1-210ENST00000468211 ZMAT1Q5H9K5 638 aa20.66■□□□□ 0.9
PTCH1-210ENST00000468211 PTCHD4Q6ZW05 846 aa20.66■□□□□ 0.9
PTCH1-210ENST00000468211 USP43Q70EL4 1123 aa20.66■□□□□ 0.9
PTCH1-210ENST00000468211 RRM2BQ7LG56 351 aa20.66■□□□□ 0.9
PTCH1-210ENST00000468211 NPEPL1Q8NDH3 523 aa20.66■□□□□ 0.9
PTCH1-210ENST00000468211 OR2Z1Q8NG97 314 aa20.66■□□□□ 0.9
PTCH1-210ENST00000468211 NRIP3Q9NQ35 241 aa20.66■□□□□ 0.9
PTCH1-210ENST00000468211 PLEK2Q9NYT0 353 aa20.66■□□□□ 0.9
PTCH1-210ENST00000468211 NDUFAF4Q9P032 175 aa20.66■□□□□ 0.9
PTCH1-210ENST00000468211 ASH2LQ9UBL3 628 aa20.66■□□□□ 0.9
PTCH1-210ENST00000468211 TMEM5Q9Y2B1 443 aa20.66■□□□□ 0.9
PTCH1-210ENST00000468211 TRBV4-1A0A0J9YWV2 114 aa20.65■□□□□ 0.9
PTCH1-210ENST00000468211 SLC16A7O60669 478 aa20.65■□□□□ 0.9
PTCH1-210ENST00000468211 NDUFB2O95178 105 aa20.65■□□□□ 0.9
PTCH1-210ENST00000468211 GPANK1O95872 356 aa20.65■□□□□ 0.9
PTCH1-210ENST00000468211 FSHBP01225 129 aa20.65■□□□□ 0.9
PTCH1-210ENST00000468211 H1F0P07305 194 aaKnown RBP20.65■□□□□ 0.9
PTCH1-210ENST00000468211 SBK2P0C263 348 aa20.65■□□□□ 0.9
PTCH1-210ENST00000468211 GSTM3P21266 225 aa20.65■□□□□ 0.9
PTCH1-210ENST00000468211 KITLGP21583 273 aa20.65■□□□□ 0.9
PTCH1-210ENST00000468211 OMPP47874 163 aa20.65■□□□□ 0.9
PTCH1-210ENST00000468211 SEC23BQ15437 767 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms