RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 WNT5AP41221 380 aa16.3■□□□□ 0.2
COL7A1-207ENST00000467985 OMPP47874 163 aa16.3■□□□□ 0.2
COL7A1-207ENST00000467985 ARHGDIAP52565 204 aa16.3■□□□□ 0.2
COL7A1-207ENST00000467985 CDH15P55291 814 aa16.3■□□□□ 0.2
COL7A1-207ENST00000467985 LCN6P62502 163 aa16.3■□□□□ 0.2
COL7A1-207ENST00000467985 KRR1Q13601 381 aaKnown RBP16.3■□□□□ 0.2
COL7A1-207ENST00000467985 ENDOGQ14249 297 aaKnown RBP16.3■□□□□ 0.2
COL7A1-207ENST00000467985 FLOT2Q14254 428 aa16.3■□□□□ 0.2
COL7A1-207ENST00000467985 MESTQ5EB52 335 aa16.3■□□□□ 0.2
COL7A1-207ENST00000467985 CYP2R1Q6VVX0 501 aa16.3■□□□□ 0.2
COL7A1-207ENST00000467985 ADCK1Q86TW2 530 aa16.3■□□□□ 0.2
COL7A1-207ENST00000467985 TMEM158Q8WZ71 300 aa16.3■□□□□ 0.2
COL7A1-207ENST00000467985 MARS2Q96GW9 593 aaKnown RBP16.3■□□□□ 0.2
COL7A1-207ENST00000467985 PYURFQ96I23 114 aa16.3■□□□□ 0.2
COL7A1-207ENST00000467985 RSRC1Q96IZ7 334 aaKnown RBP16.3■□□□□ 0.2
COL7A1-207ENST00000467985 NRIP3Q9NQ35 241 aa16.3■□□□□ 0.2
COL7A1-207ENST00000467985 ZNF275Q9NSD4 429 aaPredicted RBP16.3■□□□□ 0.2
COL7A1-207ENST00000467985 DECR2Q9NUI1 292 aa16.3■□□□□ 0.2
COL7A1-207ENST00000467985 ACTR3BQ9P1U1 418 aa16.3■□□□□ 0.2
COL7A1-207ENST00000467985 CGGBP1Q9UFW8 167 aaPredicted RBP16.3■□□□□ 0.2
COL7A1-207ENST00000467985 TEX13CA0A0J9YWL9 993 aa16.29■□□□□ 0.2
COL7A1-207ENST00000467985 PLSCR5A0PG75 271 aa16.29■□□□□ 0.2
COL7A1-207ENST00000467985 PPIHO43447 177 aaKnown RBP16.29■□□□□ 0.2
COL7A1-207ENST00000467985 TFP02787 698 aa16.29■□□□□ 0.2
COL7A1-207ENST00000467985 TUBG1P23258 451 aa16.29■□□□□ 0.2
COL7A1-207ENST00000467985 LIPAP38571 399 aa16.29■□□□□ 0.2
COL7A1-207ENST00000467985 MAGEB1P43366 347 aa16.29■□□□□ 0.2
COL7A1-207ENST00000467985 CCL8P80075 99 aa16.29■□□□□ 0.2
COL7A1-207ENST00000467985 SCRN3Q0VDG4 424 aa16.29■□□□□ 0.2
COL7A1-207ENST00000467985 TRAP1Q12931 704 aaKnown RBP16.29■□□□□ 0.2
COL7A1-207ENST00000467985 FAM209AQ5JX71 171 aa16.29■□□□□ 0.2
COL7A1-207ENST00000467985 MBNL2Q5VZF2 373 aaKnown RBP16.29■□□□□ 0.2
COL7A1-207ENST00000467985 ZNF774Q6NX45 483 aa16.29■□□□□ 0.2
COL7A1-207ENST00000467985 DPY19L2P2Q6ZN68 376 aa16.29■□□□□ 0.2
COL7A1-207ENST00000467985 FAM86B1Q8N7N1 296 aa16.29■□□□□ 0.2
COL7A1-207ENST00000467985 ABHD4Q8TB40 342 aa16.29■□□□□ 0.2
COL7A1-207ENST00000467985 YIPF5Q969M3 257 aa16.29■□□□□ 0.2
COL7A1-207ENST00000467985 TUBG2Q9NRH3 451 aa16.29■□□□□ 0.2
COL7A1-207ENST00000467985 CYSLTR2Q9NS75 346 aa16.29■□□□□ 0.2
COL7A1-207ENST00000467985 TRBV4-1A0A0J9YWV2 114 aa16.28■□□□□ 0.2
COL7A1-207ENST00000467985 UNC119BA6NIH7 251 aa16.28■□□□□ 0.2
COL7A1-207ENST00000467985 RNF212BA8MTL3 300 aa16.28■□□□□ 0.2
COL7A1-207ENST00000467985 B4DSR2 109 aa16.28■□□□□ 0.2
COL7A1-207ENST00000467985 TPD52L2O43399 206 aaKnown RBP16.28■□□□□ 0.2
COL7A1-207ENST00000467985 RP2O75695 350 aa16.28■□□□□ 0.2
COL7A1-207ENST00000467985 CRYBB2P43320 205 aa16.28■□□□□ 0.2
COL7A1-207ENST00000467985 ZNF81P51508 661 aa16.28■□□□□ 0.2
COL7A1-207ENST00000467985 RPS6KA3P51812 740 aa16.28■□□□□ 0.2
COL7A1-207ENST00000467985 PPP1CBP62140 327 aa16.28■□□□□ 0.2
COL7A1-207ENST00000467985 CCNIQ14094 377 aa16.28■□□□□ 0.2
COL7A1-207ENST00000467985 SEC23BQ15437 767 aa16.28■□□□□ 0.2
COL7A1-207ENST00000467985 CR1LQ2VPA4 569 aa16.28■□□□□ 0.2
COL7A1-207ENST00000467985 ZMAT1Q5H9K5 638 aa16.28■□□□□ 0.2
COL7A1-207ENST00000467985 MTX3Q5HYI7 312 aa16.28■□□□□ 0.2
COL7A1-207ENST00000467985 SPATA46Q5T0L3 261 aa16.28■□□□□ 0.2
COL7A1-207ENST00000467985 C1orf146Q5VVC0 180 aa16.28■□□□□ 0.2
COL7A1-207ENST00000467985 PGM2L1Q6PCE3 622 aa16.28■□□□□ 0.2
COL7A1-207ENST00000467985 GLB1L2Q8IW92 636 aa16.28■□□□□ 0.2
COL7A1-207ENST00000467985 OR52J3Q8NH60 311 aa16.28■□□□□ 0.2
COL7A1-207ENST00000467985 KLF14Q8TD94 323 aaPredicted RBP16.28■□□□□ 0.2
COL7A1-207ENST00000467985 C4orf45Q96LM5 186 aa16.28■□□□□ 0.2
COL7A1-207ENST00000467985 FUZQ9BT04 418 aa16.28■□□□□ 0.2
COL7A1-207ENST00000467985 OR2J1Q9GZK6 312 aa16.28■□□□□ 0.2
COL7A1-207ENST00000467985 RACGAP1Q9H0H5 632 aa16.28■□□□□ 0.2
COL7A1-207ENST00000467985 EMC7Q9NPA0 242 aa16.28■□□□□ 0.2
COL7A1-207ENST00000467985 VSX1Q9NZR4 365 aaPredicted RBP16.28■□□□□ 0.2
COL7A1-207ENST00000467985 V9GYQ6 96 aa16.28■□□□□ 0.2
COL7A1-207ENST00000467985 FBN3Q75N90 2809 aa16.28■□□□□ 0.2
COL7A1-207ENST00000467985 IGHV1-69-2A0A0G2JMI3 117 aa16.27■□□□□ 0.2
COL7A1-207ENST00000467985 SGCEO43556 437 aa16.27■□□□□ 0.2
COL7A1-207ENST00000467985 SLC16A7O60669 478 aa16.27■□□□□ 0.2
COL7A1-207ENST00000467985 KHDRBS3O75525 346 aaKnown RBP16.27■□□□□ 0.2
COL7A1-207ENST00000467985 DIRAS1O95057 198 aa16.27■□□□□ 0.2
COL7A1-207ENST00000467985 GADD45GO95257 159 aa16.27■□□□□ 0.2
COL7A1-207ENST00000467985 TXNDC12O95881 172 aa16.27■□□□□ 0.2
COL7A1-207ENST00000467985 SEMG1P04279 462 aa16.27■□□□□ 0.2
COL7A1-207ENST00000467985 CTLA4P16410 223 aa16.27■□□□□ 0.2
COL7A1-207ENST00000467985 DVL1P1P54792 670 aaPredicted RBP16.27■□□□□ 0.2
COL7A1-207ENST00000467985 LSM6P62312 80 aaKnown RBP16.27■□□□□ 0.2
COL7A1-207ENST00000467985 AQP6Q13520 282 aa16.27■□□□□ 0.2
COL7A1-207ENST00000467985 LCN8Q6JVE9 175 aa16.27■□□□□ 0.2
COL7A1-207ENST00000467985 SMARCD3Q6STE5 483 aa16.27■□□□□ 0.2
COL7A1-207ENST00000467985 RFPL4BQ6ZWI9 263 aa16.27■□□□□ 0.2
COL7A1-207ENST00000467985 ZER1Q7Z7L7 766 aa16.27■□□□□ 0.2
COL7A1-207ENST00000467985 NPEPL1Q8NDH3 523 aa16.27■□□□□ 0.2
COL7A1-207ENST00000467985 CLDND2Q8NHS1 167 aa16.27■□□□□ 0.2
COL7A1-207ENST00000467985 SLC25A40Q8TBP6 338 aa16.27■□□□□ 0.2
COL7A1-207ENST00000467985 IPCEF1Q8WWN9 437 aaPredicted RBP16.27■□□□□ 0.2
COL7A1-207ENST00000467985 RASD2Q96D21 266 aa16.27■□□□□ 0.2
COL7A1-207ENST00000467985 SYT4Q9H2B2 425 aa16.27■□□□□ 0.2
COL7A1-207ENST00000467985 SAP30LQ9HAJ7 183 aa16.27■□□□□ 0.2
COL7A1-207ENST00000467985 TMEFF2Q9UIK5 374 aaPredicted RBP16.27■□□□□ 0.2
COL7A1-207ENST00000467985 POMPQ9Y244 141 aa16.27■□□□□ 0.2
COL7A1-207ENST00000467985 PHF1O43189 567 aaPredicted RBP16.26■□□□□ 0.19
COL7A1-207ENST00000467985 DOK2O60496 412 aa16.26■□□□□ 0.19
COL7A1-207ENST00000467985 ABHD16AO95870 558 aa16.26■□□□□ 0.19
COL7A1-207ENST00000467985 SCG5P05408 212 aa16.26■□□□□ 0.19
COL7A1-207ENST00000467985 ATP6V1B2P21281 511 aa16.26■□□□□ 0.19
COL7A1-207ENST00000467985 IFNGR2P38484 337 aa16.26■□□□□ 0.19
COL7A1-207ENST00000467985 MPV17P39210 176 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms